Toolkit/3D pharmacophore modeling

3D pharmacophore modeling

Also known as: 3D pharmacophore models

Taxonomy: Technique Branch / Method. Workflows sit above the mechanism and technique branches rather than replacing them.

Summary

3D pharmacophore models are three-dimensional ensembles of chemically defined interactions of a ligand in its bioactive conformation.

Usefulness & Problems

No literature-backed usefulness or problem-fit explainer has been materialized for this record yet.

Taxonomy & Function

Primary hierarchy

Technique Branch

Method: A concrete computational method used to design, rank, or analyze an engineered system.

Target processes

recombinationselection

Input: Chemical

Validation

Cell-freeBacteriaMammalianMouseHumanTherapeuticIndep. Replication

Supporting Sources

Ranked Claims

Claim 1applicationsupports2020Source 1needs review

3D pharmacophore models are applied in virtual screening and mechanistic studies for protein functionality.

we provide an overview on the basic concept of this method and summarize key studies for applying 3D pharmacophore models in virtual screening and mechanistic studies for protein functionality
Claim 2definitionsupports2020Source 1needs review

3D pharmacophore models are three-dimensional ensembles of chemically defined interactions of a ligand in its bioactive conformation.

3D pharmacophore models are three-dimensional ensembles of chemically defined interactions of a ligand in its bioactive conformation.
Claim 3field assessmentsupports2020Source 1needs review

3D pharmacophore modeling is a vibrant field with various applications in drug discovery and beyond.

The recent developments show that 3D pharmacophore modeling is a vibrant field with various applications in drug discovery and beyond.
Claim 4future directionsupports2020Source 1needs review

Combining 3D pharmacophore models with molecular dynamics simulations could substantially improve the approach by capturing dynamic macromolecule-ligand interactions and more physiologically relevant interaction patterns.

The combination of 3D pharmacophore models with molecular dynamics simulations could be a quantum leap forward since these approaches consider macromolecule-ligand interactions as dynamic and therefore show a physiologically relevant interaction pattern.
Claim 5trendsupports2020Source 1needs review

Recent developments in 3D pharmacophore modeling include use of pharmacophore information in machine learning and artificial intelligence applications and freely accessible web servers.

Other trends include the efficient usage of 3D pharmacophore information in machine learning and artificial intelligence applications or freely accessible web servers for 3D pharmacophore modeling.
Claim 6utilitysupports2020Source 1needs review

3D pharmacophore models are a valuable tool in drug design because they help decipher chemically encoded ligand information.

They represent an elegant way to decipher chemically encoded ligand information and have therefore become a valuable tool in drug design.

Approval Evidence

1 source6 linked approval claimsfirst-pass slug 3d-pharmacophore-modeling
3D pharmacophore models are three-dimensional ensembles of chemically defined interactions of a ligand in its bioactive conformation.

Source:

applicationsupports

3D pharmacophore models are applied in virtual screening and mechanistic studies for protein functionality.

we provide an overview on the basic concept of this method and summarize key studies for applying 3D pharmacophore models in virtual screening and mechanistic studies for protein functionality

Source:

definitionsupports

3D pharmacophore models are three-dimensional ensembles of chemically defined interactions of a ligand in its bioactive conformation.

3D pharmacophore models are three-dimensional ensembles of chemically defined interactions of a ligand in its bioactive conformation.

Source:

field assessmentsupports

3D pharmacophore modeling is a vibrant field with various applications in drug discovery and beyond.

The recent developments show that 3D pharmacophore modeling is a vibrant field with various applications in drug discovery and beyond.

Source:

future directionsupports

Combining 3D pharmacophore models with molecular dynamics simulations could substantially improve the approach by capturing dynamic macromolecule-ligand interactions and more physiologically relevant interaction patterns.

The combination of 3D pharmacophore models with molecular dynamics simulations could be a quantum leap forward since these approaches consider macromolecule-ligand interactions as dynamic and therefore show a physiologically relevant interaction pattern.

Source:

trendsupports

Recent developments in 3D pharmacophore modeling include use of pharmacophore information in machine learning and artificial intelligence applications and freely accessible web servers.

Other trends include the efficient usage of 3D pharmacophore information in machine learning and artificial intelligence applications or freely accessible web servers for 3D pharmacophore modeling.

Source:

utilitysupports

3D pharmacophore models are a valuable tool in drug design because they help decipher chemically encoded ligand information.

They represent an elegant way to decipher chemically encoded ligand information and have therefore become a valuable tool in drug design.

Source:

Comparisons

No literature-backed comparison notes have been materialized for this record yet.

Ranked Citations

  1. 1.
    StructuralSource 1Wiley Interdisciplinary Reviews Computational Molecular Science2020Claim 1Claim 2Claim 3

    Seeded from load plan for claim cl2. Extracted from this source document.