Toolkit/dimerization/histidine phosphotransfer-like (DHpL) domain

dimerization/histidine phosphotransfer-like (DHpL) domain

Protein Domain·Research·Since 2014

Also known as: DHpL domain

Taxonomy: Mechanism Branch / Component. Workflows sit above the mechanism and technique branches rather than replacing them.

Summary

The dimerization/histidine phosphotransfer-like (DHpL) domain is a regulatory domain element within the blue-light-responsive histidine kinase EL346. Structural evidence indicates that, in the dark, interactions involving the LOV sensor domain and the DHpL domain stabilize an inhibited kinase conformation and suppress dimerization, while photoactivation weakens these contacts to promote activation.

Usefulness & Problems

Why this is useful

This domain is useful as a mechanistic handle for understanding how light input is coupled to histidine kinase regulation in EL346. The available evidence supports its role as a central interface through which the LOV sensor modulates kinase activity and oligomeric state.

Problem solved

The DHpL domain helps explain how a monomeric blue-light-responsive histidine kinase can be held inactive in the dark and activated upon illumination. Specifically, it addresses the structural basis by which sensory-domain binding inhibits kinase output and prevents dimerization.

Taxonomy & Function

Primary hierarchy

Mechanism Branch

Component: A low-level protein part used inside a larger architecture that realizes a mechanism.

Techniques

No technique tags yet.

Target processes

signaling

Input: Light

Implementation Constraints

The supplied evidence places the DHpL domain in the context of full-length EL346, where it functions through contacts with both the LOV sensor domain and the catalytic ATP-binding (CA) domain. The input modality is blue light, but the evidence does not provide construct design rules, expression conditions, or standalone deployment guidance for the DHpL domain.

The evidence is limited to a single reported structural and mechanistic study in EL346, so generality beyond this protein is not established. No independent replication, engineering optimization, or broad functional benchmarking of the isolated DHpL domain is provided in the supplied evidence.

Validation

Cell-freeBacteriaMammalianMouseHumanTherapeuticIndep. Replication

Supporting Sources

Ranked Claims

Claim 1dark state inhibitionsupports2014Source 1needs review

The DHpL domain contacts the CA domain and keeps EL346 in an inhibited conformation in the dark.

The DHpL domain also contacts the catalytic/ATP-binding (CA) domain, keeping EL346 in an inhibited conformation in the dark.
Claim 2dark state inhibitionsupports2014Source 1needs review

The DHpL domain contacts the CA domain and keeps EL346 in an inhibited conformation in the dark.

The DHpL domain also contacts the catalytic/ATP-binding (CA) domain, keeping EL346 in an inhibited conformation in the dark.
Claim 3dark state inhibitionsupports2014Source 1needs review

The DHpL domain contacts the CA domain and keeps EL346 in an inhibited conformation in the dark.

The DHpL domain also contacts the catalytic/ATP-binding (CA) domain, keeping EL346 in an inhibited conformation in the dark.
Claim 4dark state inhibitionsupports2014Source 1needs review

The DHpL domain contacts the CA domain and keeps EL346 in an inhibited conformation in the dark.

The DHpL domain also contacts the catalytic/ATP-binding (CA) domain, keeping EL346 in an inhibited conformation in the dark.
Claim 5dark state inhibitionsupports2014Source 1needs review

The DHpL domain contacts the CA domain and keeps EL346 in an inhibited conformation in the dark.

The DHpL domain also contacts the catalytic/ATP-binding (CA) domain, keeping EL346 in an inhibited conformation in the dark.
Claim 6dark state inhibitionsupports2014Source 1needs review

The DHpL domain contacts the CA domain and keeps EL346 in an inhibited conformation in the dark.

The DHpL domain also contacts the catalytic/ATP-binding (CA) domain, keeping EL346 in an inhibited conformation in the dark.
Claim 7dark state inhibitionsupports2014Source 1needs review

The DHpL domain contacts the CA domain and keeps EL346 in an inhibited conformation in the dark.

The DHpL domain also contacts the catalytic/ATP-binding (CA) domain, keeping EL346 in an inhibited conformation in the dark.
Claim 8mechanism of regulationsupports2014Source 1needs review

The LOV sensor domain controls kinase activity and prevents dimerization by binding one side of the DHpL domain.

Its structure reveals that the light-oxygen-voltage (LOV) sensor domain both controls kinase activity and prevents dimerization by binding one side of a dimerization/histidine phosphotransfer-like (DHpL) domain.
Claim 9mechanism of regulationsupports2014Source 1needs review

The LOV sensor domain controls kinase activity and prevents dimerization by binding one side of the DHpL domain.

Its structure reveals that the light-oxygen-voltage (LOV) sensor domain both controls kinase activity and prevents dimerization by binding one side of a dimerization/histidine phosphotransfer-like (DHpL) domain.
Claim 10mechanism of regulationsupports2014Source 1needs review

The LOV sensor domain controls kinase activity and prevents dimerization by binding one side of the DHpL domain.

Its structure reveals that the light-oxygen-voltage (LOV) sensor domain both controls kinase activity and prevents dimerization by binding one side of a dimerization/histidine phosphotransfer-like (DHpL) domain.
Claim 11mechanism of regulationsupports2014Source 1needs review

The LOV sensor domain controls kinase activity and prevents dimerization by binding one side of the DHpL domain.

Its structure reveals that the light-oxygen-voltage (LOV) sensor domain both controls kinase activity and prevents dimerization by binding one side of a dimerization/histidine phosphotransfer-like (DHpL) domain.
Claim 12mechanism of regulationsupports2014Source 1needs review

The LOV sensor domain controls kinase activity and prevents dimerization by binding one side of the DHpL domain.

Its structure reveals that the light-oxygen-voltage (LOV) sensor domain both controls kinase activity and prevents dimerization by binding one side of a dimerization/histidine phosphotransfer-like (DHpL) domain.
Claim 13mechanism of regulationsupports2014Source 1needs review

The LOV sensor domain controls kinase activity and prevents dimerization by binding one side of the DHpL domain.

Its structure reveals that the light-oxygen-voltage (LOV) sensor domain both controls kinase activity and prevents dimerization by binding one side of a dimerization/histidine phosphotransfer-like (DHpL) domain.
Claim 14mechanism of regulationsupports2014Source 1needs review

The LOV sensor domain controls kinase activity and prevents dimerization by binding one side of the DHpL domain.

Its structure reveals that the light-oxygen-voltage (LOV) sensor domain both controls kinase activity and prevents dimerization by binding one side of a dimerization/histidine phosphotransfer-like (DHpL) domain.
Claim 15mechanistic modelsupports2014Source 1needs review

The LOV domain controls kinase activity by affecting stability of the DHpL/CA interface and releasing the CA domain from an inhibited conformation upon photoactivation.

Our data suggest that the LOV domain controls kinase activity by affecting the stability of the DHpL/CA interface, releasing the CA domain from an inhibited conformation upon photoactivation.
Claim 16mechanistic modelsupports2014Source 1needs review

The LOV domain controls kinase activity by affecting stability of the DHpL/CA interface and releasing the CA domain from an inhibited conformation upon photoactivation.

Our data suggest that the LOV domain controls kinase activity by affecting the stability of the DHpL/CA interface, releasing the CA domain from an inhibited conformation upon photoactivation.
Claim 17mechanistic modelsupports2014Source 1needs review

The LOV domain controls kinase activity by affecting stability of the DHpL/CA interface and releasing the CA domain from an inhibited conformation upon photoactivation.

Our data suggest that the LOV domain controls kinase activity by affecting the stability of the DHpL/CA interface, releasing the CA domain from an inhibited conformation upon photoactivation.
Claim 18mechanistic modelsupports2014Source 1needs review

The LOV domain controls kinase activity by affecting stability of the DHpL/CA interface and releasing the CA domain from an inhibited conformation upon photoactivation.

Our data suggest that the LOV domain controls kinase activity by affecting the stability of the DHpL/CA interface, releasing the CA domain from an inhibited conformation upon photoactivation.
Claim 19mechanistic modelsupports2014Source 1needs review

The LOV domain controls kinase activity by affecting stability of the DHpL/CA interface and releasing the CA domain from an inhibited conformation upon photoactivation.

Our data suggest that the LOV domain controls kinase activity by affecting the stability of the DHpL/CA interface, releasing the CA domain from an inhibited conformation upon photoactivation.
Claim 20mechanistic modelsupports2014Source 1needs review

The LOV domain controls kinase activity by affecting stability of the DHpL/CA interface and releasing the CA domain from an inhibited conformation upon photoactivation.

Our data suggest that the LOV domain controls kinase activity by affecting the stability of the DHpL/CA interface, releasing the CA domain from an inhibited conformation upon photoactivation.
Claim 21mechanistic modelsupports2014Source 1needs review

The LOV domain controls kinase activity by affecting stability of the DHpL/CA interface and releasing the CA domain from an inhibited conformation upon photoactivation.

Our data suggest that the LOV domain controls kinase activity by affecting the stability of the DHpL/CA interface, releasing the CA domain from an inhibited conformation upon photoactivation.
Claim 22photoactivation mechanismsupports2014Source 1needs review

Light stimulation weakens interdomain interactions to facilitate EL346 activation.

Upon light stimulation, interdomain interactions weaken to facilitate activation.
Claim 23photoactivation mechanismsupports2014Source 1needs review

Light stimulation weakens interdomain interactions to facilitate EL346 activation.

Upon light stimulation, interdomain interactions weaken to facilitate activation.
Claim 24photoactivation mechanismsupports2014Source 1needs review

Light stimulation weakens interdomain interactions to facilitate EL346 activation.

Upon light stimulation, interdomain interactions weaken to facilitate activation.
Claim 25photoactivation mechanismsupports2014Source 1needs review

Light stimulation weakens interdomain interactions to facilitate EL346 activation.

Upon light stimulation, interdomain interactions weaken to facilitate activation.
Claim 26photoactivation mechanismsupports2014Source 1needs review

Light stimulation weakens interdomain interactions to facilitate EL346 activation.

Upon light stimulation, interdomain interactions weaken to facilitate activation.
Claim 27photoactivation mechanismsupports2014Source 1needs review

Light stimulation weakens interdomain interactions to facilitate EL346 activation.

Upon light stimulation, interdomain interactions weaken to facilitate activation.
Claim 28photoactivation mechanismsupports2014Source 1needs review

Light stimulation weakens interdomain interactions to facilitate EL346 activation.

Upon light stimulation, interdomain interactions weaken to facilitate activation.
Claim 29structural statesupports2014Source 1needs review

EL346 functions as a monomer rather than as a dimeric histidine kinase.

Contrary to the standard view that signaling occurs within HK dimers, EL346 functions as a monomer.
Claim 30structural statesupports2014Source 1needs review

EL346 functions as a monomer rather than as a dimeric histidine kinase.

Contrary to the standard view that signaling occurs within HK dimers, EL346 functions as a monomer.
Claim 31structural statesupports2014Source 1needs review

EL346 functions as a monomer rather than as a dimeric histidine kinase.

Contrary to the standard view that signaling occurs within HK dimers, EL346 functions as a monomer.
Claim 32structural statesupports2014Source 1needs review

EL346 functions as a monomer rather than as a dimeric histidine kinase.

Contrary to the standard view that signaling occurs within HK dimers, EL346 functions as a monomer.
Claim 33structural statesupports2014Source 1needs review

EL346 functions as a monomer rather than as a dimeric histidine kinase.

Contrary to the standard view that signaling occurs within HK dimers, EL346 functions as a monomer.
Claim 34structural statesupports2014Source 1needs review

EL346 functions as a monomer rather than as a dimeric histidine kinase.

Contrary to the standard view that signaling occurs within HK dimers, EL346 functions as a monomer.
Claim 35structural statesupports2014Source 1needs review

EL346 functions as a monomer rather than as a dimeric histidine kinase.

Contrary to the standard view that signaling occurs within HK dimers, EL346 functions as a monomer.

Approval Evidence

1 source3 linked approval claimsfirst-pass slug dimerization-histidine-phosphotransfer-like-dhpl-domain
by binding one side of a dimerization/histidine phosphotransfer-like (DHpL) domain

Source:

dark state inhibitionsupports

The DHpL domain contacts the CA domain and keeps EL346 in an inhibited conformation in the dark.

The DHpL domain also contacts the catalytic/ATP-binding (CA) domain, keeping EL346 in an inhibited conformation in the dark.

Source:

mechanism of regulationsupports

The LOV sensor domain controls kinase activity and prevents dimerization by binding one side of the DHpL domain.

Its structure reveals that the light-oxygen-voltage (LOV) sensor domain both controls kinase activity and prevents dimerization by binding one side of a dimerization/histidine phosphotransfer-like (DHpL) domain.

Source:

mechanistic modelsupports

The LOV domain controls kinase activity by affecting stability of the DHpL/CA interface and releasing the CA domain from an inhibited conformation upon photoactivation.

Our data suggest that the LOV domain controls kinase activity by affecting the stability of the DHpL/CA interface, releasing the CA domain from an inhibited conformation upon photoactivation.

Source:

Comparisons

Source-backed strengths

A full-length structural study provides direct evidence that one side of the DHpL domain is bound by the LOV sensor domain and that the DHpL domain contacts the CA domain in the inhibited dark state. The mechanistic model further links photoactivation to destabilization of the DHpL/CA interface and release of the CA domain from inhibition.

Ranked Citations

  1. 1.
    StructuralSource 1Proceedings of the National Academy of Sciences2014Claim 1Claim 2Claim 3

    Extracted from this source document.