Toolkit/dynamic regulation

dynamic regulation

Engineering Method·Research·Since 2015

Taxonomy: Technique Branch / Method. Workflows sit above the mechanism and technique branches rather than replacing them.

Summary

Dynamic regulation is a metabolic engineering method that modulates gene expression over time to rebalance metabolic fluxes in response to changing cellular or fermentation conditions. It is used to build responsive cell factories rather than relying on fixed static control.

Usefulness & Problems

Why this is useful

This method is useful for managing trade-offs between cellular growth and product formation during bioproduction. The cited review also states that dynamic gene expression profiles can help avoid buildup of undesired intermediates.

Problem solved

Dynamic regulation addresses the problem that static control can be poorly matched to changing intracellular and fermentation states during production. It helps solve the need to rebalance pathway fluxes over time as conditions change in the cell or fermentation medium.

Taxonomy & Function

Primary hierarchy

Technique Branch

Method: A concrete method used to build, optimize, or evolve an engineered system.

Techniques

No technique tags yet.

Target processes

No target processes tagged yet.

Implementation Constraints

The supplied evidence indicates that development of dynamic systems has been supported by advances in synthetic biology, high-throughput screening, screening techniques, and DNA synthesis. However, the evidence does not specify particular sensors, regulatory parts, host organisms, cofactors, or construct designs.

The cited literature states that implementation of dynamic control is more complex than static control. No specific quantitative performance benchmarks, host range, or standardized architectures are provided in the supplied evidence.

Validation

Cell-freeBacteriaMammalianMouseHumanTherapeuticIndep. Replication

Supporting Sources

Ranked Claims

Claim 1review summarysupports2015Source 1needs review

Advances in high-throughput screening, screening techniques, synthetic biology, and DNA synthesis support development and innovation of new dynamic systems.

explores how advances in high-throughput screening and synthetic biology can support development of new dynamic systems... advances in screening techniques and DNA synthesis will continue to drive innovation in this field
Claim 2review summarysupports2015Source 1needs review

Advances in high-throughput screening, screening techniques, synthetic biology, and DNA synthesis support development and innovation of new dynamic systems.

explores how advances in high-throughput screening and synthetic biology can support development of new dynamic systems... advances in screening techniques and DNA synthesis will continue to drive innovation in this field
Claim 3review summarysupports2015Source 1needs review

Advances in high-throughput screening, screening techniques, synthetic biology, and DNA synthesis support development and innovation of new dynamic systems.

explores how advances in high-throughput screening and synthetic biology can support development of new dynamic systems... advances in screening techniques and DNA synthesis will continue to drive innovation in this field
Claim 4review summarysupports2015Source 1needs review

Advances in high-throughput screening, screening techniques, synthetic biology, and DNA synthesis support development and innovation of new dynamic systems.

explores how advances in high-throughput screening and synthetic biology can support development of new dynamic systems... advances in screening techniques and DNA synthesis will continue to drive innovation in this field
Claim 5review summarysupports2015Source 1needs review

Advances in high-throughput screening, screening techniques, synthetic biology, and DNA synthesis support development and innovation of new dynamic systems.

explores how advances in high-throughput screening and synthetic biology can support development of new dynamic systems... advances in screening techniques and DNA synthesis will continue to drive innovation in this field
Claim 6review summarysupports2015Source 1needs review

Advances in high-throughput screening, screening techniques, synthetic biology, and DNA synthesis support development and innovation of new dynamic systems.

explores how advances in high-throughput screening and synthetic biology can support development of new dynamic systems... advances in screening techniques and DNA synthesis will continue to drive innovation in this field
Claim 7review summarysupports2015Source 1needs review

Advances in high-throughput screening, screening techniques, synthetic biology, and DNA synthesis support development and innovation of new dynamic systems.

explores how advances in high-throughput screening and synthetic biology can support development of new dynamic systems... advances in screening techniques and DNA synthesis will continue to drive innovation in this field
Claim 8review summarysupports2015Source 1needs review

Dynamic gene expression profiles can help manage trade-offs between growth and production and avoid buildup of undesired intermediates.

Dynamic gene expression profiles allow trade-offs between growth and production to be better managed and can help avoid build-up of undesired intermediates.
Claim 9review summarysupports2015Source 1needs review

Dynamic gene expression profiles can help manage trade-offs between growth and production and avoid buildup of undesired intermediates.

Dynamic gene expression profiles allow trade-offs between growth and production to be better managed and can help avoid build-up of undesired intermediates.
Claim 10review summarysupports2015Source 1needs review

Dynamic gene expression profiles can help manage trade-offs between growth and production and avoid buildup of undesired intermediates.

Dynamic gene expression profiles allow trade-offs between growth and production to be better managed and can help avoid build-up of undesired intermediates.
Claim 11review summarysupports2015Source 1needs review

Dynamic gene expression profiles can help manage trade-offs between growth and production and avoid buildup of undesired intermediates.

Dynamic gene expression profiles allow trade-offs between growth and production to be better managed and can help avoid build-up of undesired intermediates.
Claim 12review summarysupports2015Source 1needs review

Dynamic gene expression profiles can help manage trade-offs between growth and production and avoid buildup of undesired intermediates.

Dynamic gene expression profiles allow trade-offs between growth and production to be better managed and can help avoid build-up of undesired intermediates.
Claim 13review summarysupports2015Source 1needs review

Dynamic gene expression profiles can help manage trade-offs between growth and production and avoid buildup of undesired intermediates.

Dynamic gene expression profiles allow trade-offs between growth and production to be better managed and can help avoid build-up of undesired intermediates.
Claim 14review summarysupports2015Source 1needs review

Dynamic gene expression profiles can help manage trade-offs between growth and production and avoid buildup of undesired intermediates.

Dynamic gene expression profiles allow trade-offs between growth and production to be better managed and can help avoid build-up of undesired intermediates.
Claim 15review summarysupports2015Source 1needs review

Dynamic regulation strategies allow rebalancing of metabolic fluxes according to changing cellular or fermentation conditions.

a number of groups have developed strategies for dynamic regulation, which allows rebalancing of fluxes according to changing conditions in the cell or the fermentation medium
Claim 16review summarysupports2015Source 1needs review

Dynamic regulation strategies allow rebalancing of metabolic fluxes according to changing cellular or fermentation conditions.

a number of groups have developed strategies for dynamic regulation, which allows rebalancing of fluxes according to changing conditions in the cell or the fermentation medium
Claim 17review summarysupports2015Source 1needs review

Dynamic regulation strategies allow rebalancing of metabolic fluxes according to changing cellular or fermentation conditions.

a number of groups have developed strategies for dynamic regulation, which allows rebalancing of fluxes according to changing conditions in the cell or the fermentation medium
Claim 18review summarysupports2015Source 1needs review

Dynamic regulation strategies allow rebalancing of metabolic fluxes according to changing cellular or fermentation conditions.

a number of groups have developed strategies for dynamic regulation, which allows rebalancing of fluxes according to changing conditions in the cell or the fermentation medium
Claim 19review summarysupports2015Source 1needs review

Dynamic regulation strategies allow rebalancing of metabolic fluxes according to changing cellular or fermentation conditions.

a number of groups have developed strategies for dynamic regulation, which allows rebalancing of fluxes according to changing conditions in the cell or the fermentation medium
Claim 20review summarysupports2015Source 1needs review

Dynamic regulation strategies allow rebalancing of metabolic fluxes according to changing cellular or fermentation conditions.

a number of groups have developed strategies for dynamic regulation, which allows rebalancing of fluxes according to changing conditions in the cell or the fermentation medium
Claim 21review summarysupports2015Source 1needs review

Dynamic regulation strategies allow rebalancing of metabolic fluxes according to changing cellular or fermentation conditions.

a number of groups have developed strategies for dynamic regulation, which allows rebalancing of fluxes according to changing conditions in the cell or the fermentation medium
Claim 22review summarysupports2015Source 1needs review

Implementation of dynamic control is more complex than static control.

The implementation is more complex relative to static control
Claim 23review summarysupports2015Source 1needs review

Implementation of dynamic control is more complex than static control.

The implementation is more complex relative to static control
Claim 24review summarysupports2015Source 1needs review

Implementation of dynamic control is more complex than static control.

The implementation is more complex relative to static control
Claim 25review summarysupports2015Source 1needs review

Implementation of dynamic control is more complex than static control.

The implementation is more complex relative to static control
Claim 26review summarysupports2015Source 1needs review

Implementation of dynamic control is more complex than static control.

The implementation is more complex relative to static control
Claim 27review summarysupports2015Source 1needs review

Implementation of dynamic control is more complex than static control.

The implementation is more complex relative to static control
Claim 28review summarysupports2015Source 1needs review

Implementation of dynamic control is more complex than static control.

The implementation is more complex relative to static control

Approval Evidence

1 source3 linked approval claimsfirst-pass slug dynamic-regulation
more recently a number of groups have developed strategies for dynamic regulation, which allows rebalancing of fluxes according to changing conditions in the cell or the fermentation medium

Source:

review summarysupports

Dynamic gene expression profiles can help manage trade-offs between growth and production and avoid buildup of undesired intermediates.

Dynamic gene expression profiles allow trade-offs between growth and production to be better managed and can help avoid build-up of undesired intermediates.

Source:

review summarysupports

Dynamic regulation strategies allow rebalancing of metabolic fluxes according to changing cellular or fermentation conditions.

a number of groups have developed strategies for dynamic regulation, which allows rebalancing of fluxes according to changing conditions in the cell or the fermentation medium

Source:

review summarysupports

Implementation of dynamic control is more complex than static control.

The implementation is more complex relative to static control

Source:

Comparisons

Source-backed strengths

The main reported strength is adaptive metabolic flux rebalancing according to changing conditions. The source review further indicates that dynamic gene expression can improve handling of growth-versus-production trade-offs and reduce accumulation of unwanted intermediates.

Ranked Citations

  1. 1.
    StructuralSource 1Biotechnology Journal2015Claim 1Claim 2Claim 3

    Seeded from load plan for claim c1. Extracted from this source document.