Source 1review2022Cells
Toolkit/gene knock-out
gene knock-out
Also known as: gene knock-out(s)
Taxonomy: Technique Branch / Method. Workflows sit above the mechanism and technique branches rather than replacing them.
Summary
Gene knock-out is described in the cited review as a CRISPR-based engineering method for targeted genome manipulation, including virus-targeted manipulation through sgRNA design and knock-out strategies. The review places this method within broader RNA and DNA manipulation applications across multiple organisms.
Usefulness & Problems
Why this is useful
According to the review, gene knock-out is useful for targeted manipulation of viral genomes and for identifying significant genes involved in virus-host interactions. This positions the method as a way to interrogate gene function in virology-focused CRISPR workflows.
Source:
Furthermore, we have emphasized the application of CRISPR technology in virus diagnosis and in finding significant genes involved in virus-host interactions.
Source:
This approach has provided an unprecedented opportunity for creating simple, inexpensive, specific, targeted, accurate, and practical manipulations of viruses, such as severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), human immunodeficiency virus-1 (HIV-1), and vaccinia virus.
Problem solved
The method addresses the need for targeted genetic perturbation when studying viral genomes and genes involved in virus-host interactions. The supplied evidence supports its use as part of CRISPR-based virus manipulation, but does not provide a more specific problem formulation or benchmarked use case.
Source:
Furthermore, we have emphasized the application of CRISPR technology in virus diagnosis and in finding significant genes involved in virus-host interactions.
Source:
This approach has provided an unprecedented opportunity for creating simple, inexpensive, specific, targeted, accurate, and practical manipulations of viruses, such as severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), human immunodeficiency virus-1 (HIV-1), and vaccinia virus.
Taxonomy & Function
Primary hierarchy
Technique Branch
Method: A concrete method used to build, optimize, or evolve an engineered system.
Techniques
Computational DesignTarget processes
No target processes tagged yet.
Implementation Constraints
cofactor dependency: cofactor requirement unknownencoding mode: genetically encodedimplementation constraint: context specific validationoperating role: builder
The evidence specifically mentions designing sgRNA for gene knock-out in virus-targeted manipulation. No additional implementation details are provided on nuclease choice, PAM requirements, vector system, host cells, or delivery method.
The supplied evidence comes from a review-level description and does not report direct performance data, editing efficiencies, specificity measurements, or comparative results for gene knock-out. It also does not specify which CRISPR effector, delivery format, or experimental context was used for the cited viral examples.
Validation
Cell-freeBacteriaMammalianMouseHumanTherapeuticIndep. Replication
Supporting Sources
Ranked Claims
The review emphasizes CRISPR applications in virus diagnosis and in identifying significant genes involved in virus-host interactions.
Furthermore, we have emphasized the application of CRISPR technology in virus diagnosis and in finding significant genes involved in virus-host interactions.
The review emphasizes CRISPR applications in virus diagnosis and in identifying significant genes involved in virus-host interactions.
Furthermore, we have emphasized the application of CRISPR technology in virus diagnosis and in finding significant genes involved in virus-host interactions.
The review emphasizes CRISPR applications in virus diagnosis and in identifying significant genes involved in virus-host interactions.
Furthermore, we have emphasized the application of CRISPR technology in virus diagnosis and in finding significant genes involved in virus-host interactions.
The review emphasizes CRISPR applications in virus diagnosis and in identifying significant genes involved in virus-host interactions.
Furthermore, we have emphasized the application of CRISPR technology in virus diagnosis and in finding significant genes involved in virus-host interactions.
The review emphasizes CRISPR applications in virus diagnosis and in identifying significant genes involved in virus-host interactions.
Furthermore, we have emphasized the application of CRISPR technology in virus diagnosis and in finding significant genes involved in virus-host interactions.
The review emphasizes CRISPR applications in virus diagnosis and in identifying significant genes involved in virus-host interactions.
Furthermore, we have emphasized the application of CRISPR technology in virus diagnosis and in finding significant genes involved in virus-host interactions.
The review emphasizes CRISPR applications in virus diagnosis and in identifying significant genes involved in virus-host interactions.
Furthermore, we have emphasized the application of CRISPR technology in virus diagnosis and in finding significant genes involved in virus-host interactions.
The review emphasizes CRISPR applications in virus diagnosis and in identifying significant genes involved in virus-host interactions.
Furthermore, we have emphasized the application of CRISPR technology in virus diagnosis and in finding significant genes involved in virus-host interactions.
The review emphasizes CRISPR applications in virus diagnosis and in identifying significant genes involved in virus-host interactions.
Furthermore, we have emphasized the application of CRISPR technology in virus diagnosis and in finding significant genes involved in virus-host interactions.
The review emphasizes CRISPR applications in virus diagnosis and in identifying significant genes involved in virus-host interactions.
Furthermore, we have emphasized the application of CRISPR technology in virus diagnosis and in finding significant genes involved in virus-host interactions.
The review states that CRISPR enables targeted manipulation of viral genomes, including examples involving SARS-CoV-2, HIV-1, and vaccinia virus.
This approach has provided an unprecedented opportunity for creating simple, inexpensive, specific, targeted, accurate, and practical manipulations of viruses, such as severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), human immunodeficiency virus-1 (HIV-1), and vaccinia virus.
The review states that CRISPR enables targeted manipulation of viral genomes, including examples involving SARS-CoV-2, HIV-1, and vaccinia virus.
This approach has provided an unprecedented opportunity for creating simple, inexpensive, specific, targeted, accurate, and practical manipulations of viruses, such as severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), human immunodeficiency virus-1 (HIV-1), and vaccinia virus.
The review states that CRISPR enables targeted manipulation of viral genomes, including examples involving SARS-CoV-2, HIV-1, and vaccinia virus.
This approach has provided an unprecedented opportunity for creating simple, inexpensive, specific, targeted, accurate, and practical manipulations of viruses, such as severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), human immunodeficiency virus-1 (HIV-1), and vaccinia virus.
The review states that CRISPR enables targeted manipulation of viral genomes, including examples involving SARS-CoV-2, HIV-1, and vaccinia virus.
This approach has provided an unprecedented opportunity for creating simple, inexpensive, specific, targeted, accurate, and practical manipulations of viruses, such as severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), human immunodeficiency virus-1 (HIV-1), and vaccinia virus.
The review states that CRISPR enables targeted manipulation of viral genomes, including examples involving SARS-CoV-2, HIV-1, and vaccinia virus.
This approach has provided an unprecedented opportunity for creating simple, inexpensive, specific, targeted, accurate, and practical manipulations of viruses, such as severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), human immunodeficiency virus-1 (HIV-1), and vaccinia virus.
The review states that CRISPR enables targeted manipulation of viral genomes, including examples involving SARS-CoV-2, HIV-1, and vaccinia virus.
This approach has provided an unprecedented opportunity for creating simple, inexpensive, specific, targeted, accurate, and practical manipulations of viruses, such as severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), human immunodeficiency virus-1 (HIV-1), and vaccinia virus.
The review states that CRISPR enables targeted manipulation of viral genomes, including examples involving SARS-CoV-2, HIV-1, and vaccinia virus.
This approach has provided an unprecedented opportunity for creating simple, inexpensive, specific, targeted, accurate, and practical manipulations of viruses, such as severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), human immunodeficiency virus-1 (HIV-1), and vaccinia virus.
The review states that CRISPR enables targeted manipulation of viral genomes, including examples involving SARS-CoV-2, HIV-1, and vaccinia virus.
This approach has provided an unprecedented opportunity for creating simple, inexpensive, specific, targeted, accurate, and practical manipulations of viruses, such as severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), human immunodeficiency virus-1 (HIV-1), and vaccinia virus.
The review states that CRISPR enables targeted manipulation of viral genomes, including examples involving SARS-CoV-2, HIV-1, and vaccinia virus.
This approach has provided an unprecedented opportunity for creating simple, inexpensive, specific, targeted, accurate, and practical manipulations of viruses, such as severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), human immunodeficiency virus-1 (HIV-1), and vaccinia virus.
The review states that CRISPR enables targeted manipulation of viral genomes, including examples involving SARS-CoV-2, HIV-1, and vaccinia virus.
This approach has provided an unprecedented opportunity for creating simple, inexpensive, specific, targeted, accurate, and practical manipulations of viruses, such as severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), human immunodeficiency virus-1 (HIV-1), and vaccinia virus.
The review describes CRISPR as a widely used tool for RNA and DNA manipulation in multiple organisms.
CRISPR (clustered regularly interspaced short palindromic repeats) is becoming one of the most functional and widely used tools for RNA and DNA manipulation in multiple organisms.
The review describes CRISPR as a widely used tool for RNA and DNA manipulation in multiple organisms.
CRISPR (clustered regularly interspaced short palindromic repeats) is becoming one of the most functional and widely used tools for RNA and DNA manipulation in multiple organisms.
The review describes CRISPR as a widely used tool for RNA and DNA manipulation in multiple organisms.
CRISPR (clustered regularly interspaced short palindromic repeats) is becoming one of the most functional and widely used tools for RNA and DNA manipulation in multiple organisms.
The review describes CRISPR as a widely used tool for RNA and DNA manipulation in multiple organisms.
CRISPR (clustered regularly interspaced short palindromic repeats) is becoming one of the most functional and widely used tools for RNA and DNA manipulation in multiple organisms.
The review describes CRISPR as a widely used tool for RNA and DNA manipulation in multiple organisms.
CRISPR (clustered regularly interspaced short palindromic repeats) is becoming one of the most functional and widely used tools for RNA and DNA manipulation in multiple organisms.
The review describes CRISPR as a widely used tool for RNA and DNA manipulation in multiple organisms.
CRISPR (clustered regularly interspaced short palindromic repeats) is becoming one of the most functional and widely used tools for RNA and DNA manipulation in multiple organisms.
The review describes CRISPR as a widely used tool for RNA and DNA manipulation in multiple organisms.
CRISPR (clustered regularly interspaced short palindromic repeats) is becoming one of the most functional and widely used tools for RNA and DNA manipulation in multiple organisms.
The review describes CRISPR as a widely used tool for RNA and DNA manipulation in multiple organisms.
CRISPR (clustered regularly interspaced short palindromic repeats) is becoming one of the most functional and widely used tools for RNA and DNA manipulation in multiple organisms.
The review describes CRISPR as a widely used tool for RNA and DNA manipulation in multiple organisms.
CRISPR (clustered regularly interspaced short palindromic repeats) is becoming one of the most functional and widely used tools for RNA and DNA manipulation in multiple organisms.
The review describes CRISPR as a widely used tool for RNA and DNA manipulation in multiple organisms.
CRISPR (clustered regularly interspaced short palindromic repeats) is becoming one of the most functional and widely used tools for RNA and DNA manipulation in multiple organisms.
The review states that a valid and scientifically designed CRISPR system is critical for more effective and accurate viral changes.
Nevertheless, a valid and scientifically designed CRISPR system is critical to make more effective and accurate changes in viruses.
The review states that a valid and scientifically designed CRISPR system is critical for more effective and accurate viral changes.
Nevertheless, a valid and scientifically designed CRISPR system is critical to make more effective and accurate changes in viruses.
The review states that a valid and scientifically designed CRISPR system is critical for more effective and accurate viral changes.
Nevertheless, a valid and scientifically designed CRISPR system is critical to make more effective and accurate changes in viruses.
The review states that a valid and scientifically designed CRISPR system is critical for more effective and accurate viral changes.
Nevertheless, a valid and scientifically designed CRISPR system is critical to make more effective and accurate changes in viruses.
The review states that a valid and scientifically designed CRISPR system is critical for more effective and accurate viral changes.
Nevertheless, a valid and scientifically designed CRISPR system is critical to make more effective and accurate changes in viruses.
The review states that a valid and scientifically designed CRISPR system is critical for more effective and accurate viral changes.
Nevertheless, a valid and scientifically designed CRISPR system is critical to make more effective and accurate changes in viruses.
The review states that a valid and scientifically designed CRISPR system is critical for more effective and accurate viral changes.
Nevertheless, a valid and scientifically designed CRISPR system is critical to make more effective and accurate changes in viruses.
The review states that a valid and scientifically designed CRISPR system is critical for more effective and accurate viral changes.
Nevertheless, a valid and scientifically designed CRISPR system is critical to make more effective and accurate changes in viruses.
The review states that a valid and scientifically designed CRISPR system is critical for more effective and accurate viral changes.
Nevertheless, a valid and scientifically designed CRISPR system is critical to make more effective and accurate changes in viruses.
The review states that a valid and scientifically designed CRISPR system is critical for more effective and accurate viral changes.
Nevertheless, a valid and scientifically designed CRISPR system is critical to make more effective and accurate changes in viruses.
The review states that CRISPR can be used for effective and precise diagnosis of viral infections.
Furthermore, this method can be used to make an effective and precise diagnosis of viral infections.
The review states that CRISPR can be used for effective and precise diagnosis of viral infections.
Furthermore, this method can be used to make an effective and precise diagnosis of viral infections.
The review states that CRISPR can be used for effective and precise diagnosis of viral infections.
Furthermore, this method can be used to make an effective and precise diagnosis of viral infections.
The review states that CRISPR can be used for effective and precise diagnosis of viral infections.
Furthermore, this method can be used to make an effective and precise diagnosis of viral infections.
The review states that CRISPR can be used for effective and precise diagnosis of viral infections.
Furthermore, this method can be used to make an effective and precise diagnosis of viral infections.
The review states that CRISPR can be used for effective and precise diagnosis of viral infections.
Furthermore, this method can be used to make an effective and precise diagnosis of viral infections.
The review states that CRISPR can be used for effective and precise diagnosis of viral infections.
Furthermore, this method can be used to make an effective and precise diagnosis of viral infections.
The review states that CRISPR can be used for effective and precise diagnosis of viral infections.
Furthermore, this method can be used to make an effective and precise diagnosis of viral infections.
The review states that CRISPR can be used for effective and precise diagnosis of viral infections.
Furthermore, this method can be used to make an effective and precise diagnosis of viral infections.
The review states that CRISPR can be used for effective and precise diagnosis of viral infections.
Furthermore, this method can be used to make an effective and precise diagnosis of viral infections.
The review focuses on effective design of sgRNA and on gene knock-in and gene knock-out strategies for virus-targeted manipulation.
In this review, we have focused on the best and the most effective ways to design sgRNA, gene knock-in(s), and gene knock-out(s) for virus-targeted manipulation.
The review focuses on effective design of sgRNA and on gene knock-in and gene knock-out strategies for virus-targeted manipulation.
In this review, we have focused on the best and the most effective ways to design sgRNA, gene knock-in(s), and gene knock-out(s) for virus-targeted manipulation.
The review focuses on effective design of sgRNA and on gene knock-in and gene knock-out strategies for virus-targeted manipulation.
In this review, we have focused on the best and the most effective ways to design sgRNA, gene knock-in(s), and gene knock-out(s) for virus-targeted manipulation.
The review focuses on effective design of sgRNA and on gene knock-in and gene knock-out strategies for virus-targeted manipulation.
In this review, we have focused on the best and the most effective ways to design sgRNA, gene knock-in(s), and gene knock-out(s) for virus-targeted manipulation.
The review focuses on effective design of sgRNA and on gene knock-in and gene knock-out strategies for virus-targeted manipulation.
In this review, we have focused on the best and the most effective ways to design sgRNA, gene knock-in(s), and gene knock-out(s) for virus-targeted manipulation.
The review focuses on effective design of sgRNA and on gene knock-in and gene knock-out strategies for virus-targeted manipulation.
In this review, we have focused on the best and the most effective ways to design sgRNA, gene knock-in(s), and gene knock-out(s) for virus-targeted manipulation.
The review focuses on effective design of sgRNA and on gene knock-in and gene knock-out strategies for virus-targeted manipulation.
In this review, we have focused on the best and the most effective ways to design sgRNA, gene knock-in(s), and gene knock-out(s) for virus-targeted manipulation.
The review focuses on effective design of sgRNA and on gene knock-in and gene knock-out strategies for virus-targeted manipulation.
In this review, we have focused on the best and the most effective ways to design sgRNA, gene knock-in(s), and gene knock-out(s) for virus-targeted manipulation.
The review focuses on effective design of sgRNA and on gene knock-in and gene knock-out strategies for virus-targeted manipulation.
In this review, we have focused on the best and the most effective ways to design sgRNA, gene knock-in(s), and gene knock-out(s) for virus-targeted manipulation.
The review focuses on effective design of sgRNA and on gene knock-in and gene knock-out strategies for virus-targeted manipulation.
In this review, we have focused on the best and the most effective ways to design sgRNA, gene knock-in(s), and gene knock-out(s) for virus-targeted manipulation.
The review focuses on effective design of sgRNA and on gene knock-in and gene knock-out strategies for virus-targeted manipulation.
In this review, we have focused on the best and the most effective ways to design sgRNA, gene knock-in(s), and gene knock-out(s) for virus-targeted manipulation.
The review focuses on effective design of sgRNA and on gene knock-in and gene knock-out strategies for virus-targeted manipulation.
In this review, we have focused on the best and the most effective ways to design sgRNA, gene knock-in(s), and gene knock-out(s) for virus-targeted manipulation.
The review focuses on effective design of sgRNA and on gene knock-in and gene knock-out strategies for virus-targeted manipulation.
In this review, we have focused on the best and the most effective ways to design sgRNA, gene knock-in(s), and gene knock-out(s) for virus-targeted manipulation.
The review focuses on effective design of sgRNA and on gene knock-in and gene knock-out strategies for virus-targeted manipulation.
In this review, we have focused on the best and the most effective ways to design sgRNA, gene knock-in(s), and gene knock-out(s) for virus-targeted manipulation.
The review focuses on effective design of sgRNA and on gene knock-in and gene knock-out strategies for virus-targeted manipulation.
In this review, we have focused on the best and the most effective ways to design sgRNA, gene knock-in(s), and gene knock-out(s) for virus-targeted manipulation.
The review focuses on effective design of sgRNA and on gene knock-in and gene knock-out strategies for virus-targeted manipulation.
In this review, we have focused on the best and the most effective ways to design sgRNA, gene knock-in(s), and gene knock-out(s) for virus-targeted manipulation.
The review focuses on effective design of sgRNA and on gene knock-in and gene knock-out strategies for virus-targeted manipulation.
In this review, we have focused on the best and the most effective ways to design sgRNA, gene knock-in(s), and gene knock-out(s) for virus-targeted manipulation.
The review focuses on effective design of sgRNA and on gene knock-in and gene knock-out strategies for virus-targeted manipulation.
In this review, we have focused on the best and the most effective ways to design sgRNA, gene knock-in(s), and gene knock-out(s) for virus-targeted manipulation.
The review focuses on effective design of sgRNA and on gene knock-in and gene knock-out strategies for virus-targeted manipulation.
In this review, we have focused on the best and the most effective ways to design sgRNA, gene knock-in(s), and gene knock-out(s) for virus-targeted manipulation.
The review focuses on effective design of sgRNA and on gene knock-in and gene knock-out strategies for virus-targeted manipulation.
In this review, we have focused on the best and the most effective ways to design sgRNA, gene knock-in(s), and gene knock-out(s) for virus-targeted manipulation.
The review focuses on effective design of sgRNA and on gene knock-in and gene knock-out strategies for virus-targeted manipulation.
In this review, we have focused on the best and the most effective ways to design sgRNA, gene knock-in(s), and gene knock-out(s) for virus-targeted manipulation.
The review focuses on effective design of sgRNA and on gene knock-in and gene knock-out strategies for virus-targeted manipulation.
In this review, we have focused on the best and the most effective ways to design sgRNA, gene knock-in(s), and gene knock-out(s) for virus-targeted manipulation.
The review focuses on effective design of sgRNA and on gene knock-in and gene knock-out strategies for virus-targeted manipulation.
In this review, we have focused on the best and the most effective ways to design sgRNA, gene knock-in(s), and gene knock-out(s) for virus-targeted manipulation.
The review focuses on effective design of sgRNA and on gene knock-in and gene knock-out strategies for virus-targeted manipulation.
In this review, we have focused on the best and the most effective ways to design sgRNA, gene knock-in(s), and gene knock-out(s) for virus-targeted manipulation.
The review focuses on effective design of sgRNA and on gene knock-in and gene knock-out strategies for virus-targeted manipulation.
In this review, we have focused on the best and the most effective ways to design sgRNA, gene knock-in(s), and gene knock-out(s) for virus-targeted manipulation.
The review focuses on effective design of sgRNA and on gene knock-in and gene knock-out strategies for virus-targeted manipulation.
In this review, we have focused on the best and the most effective ways to design sgRNA, gene knock-in(s), and gene knock-out(s) for virus-targeted manipulation.
The review focuses on effective design of sgRNA and on gene knock-in and gene knock-out strategies for virus-targeted manipulation.
In this review, we have focused on the best and the most effective ways to design sgRNA, gene knock-in(s), and gene knock-out(s) for virus-targeted manipulation.
Approval Evidence
1 source1 linked approval claimfirst-pass slug gene-knock-out
In this review, we have focused on the best and the most effective ways to design sgRNA, gene knock-in(s), and gene knock-out(s) for virus-targeted manipulation.
Source:
review focussupports
The review focuses on effective design of sgRNA and on gene knock-in and gene knock-out strategies for virus-targeted manipulation.
In this review, we have focused on the best and the most effective ways to design sgRNA, gene knock-in(s), and gene knock-out(s) for virus-targeted manipulation.
Source:
Comparisons
Source-backed strengths
The review describes CRISPR as a widely used tool for RNA and DNA manipulation in multiple organisms, indicating broad conceptual applicability. It also cites targeted manipulation of viral genomes, with examples involving SARS-CoV-2, HIV-1, and vaccinia virus.
Compared with CoTV
gene knock-out and CoTV address a similar problem space.
Shared frame: same top-level item type
Strengths here: looks easier to implement in practice.
Compared with gene knock-in
gene knock-out and gene knock-in address a similar problem space.
Shared frame: same top-level item type; shared mechanisms: crispr-guided targeted genome manipulation
Compared with light-dependent protein (un)folding reactions
gene knock-out and light-dependent protein (un)folding reactions address a similar problem space.
Shared frame: same top-level item type
Strengths here: looks easier to implement in practice.
Ranked Citations
- 1.