Toolkit/halorhodopsin

halorhodopsin

Protein Domain·Research·Since 2014

Also known as: eNpHR, eNpHR3.0, Halo, halorhodopsin, Halorhodopsin, halorhodopsin NpHR, HR, inhibitory halorhodopsin NpHR, Natronomonas halorhodopsin, Natronomonas pharaonis halorhodopsin, NpHR, optogenetic inhibition

Taxonomy: Mechanism Branch / Component. Workflows sit above the mechanism and technique branches rather than replacing them.

Summary

Halorhodopsin (NpHR) is a microbial rhodopsin optogenetic tool described as a hyperpolarizing light-driven chloride ion pump. It is used for optical silencing and artificial modulation of neuronal activity, and has been combined with channelrhodopsin-2 (ChR2) for multimodal remote control of neurons in culture, tissue, and living animals.

Usefulness & Problems

Why this is useful

NpHR is useful as an inhibitory optogenetic actuator because it enables light-driven membrane hyperpolarization and optical silencing. The cited literature places it within the microbial rhodopsin toolbox for analyses of synaptic transmission, neuronal network activity, and behavioral experiments.

Source:

Halorhodopsin is listed as an ion pumping rhodopsin covered in this rhodopsin-based optogenetics chapter.

Source:

rhodopsin-based optogenetics

Source:

neuronal inhibition

Problem solved

NpHR helps solve the problem of achieving remote, light-based suppression of neuronal activity with a genetically encoded protein. The evidence specifically supports its use for optical silencing and for pairing with ChR2 to provide complementary activation and inhibition in the same experimental framework.

Source:

It is presented as part of the microbial rhodopsin toolbox for addressing neuronal activity and inhibition.

Source:

light-driven control of neuronal activity using ion pumping rhodopsins

Published Workflows

Objective: Test whether optogenetic chloride regulation in reactive astrocytes can mitigate Parkinson's disease pathology in an A53T α-Syn overexpression rat model.

Why it works: The abstract states that reactive astrocytes contribute to PD pathology by increasing GABA secretion and losing the ability to degrade α-Syn aggregates, and that optogenetic modulation of these astrocytes may reverse those pathological effects.

chloride-pump-based modulation of reactive astrocytesalleviation of astrocytic aberrant tonic inhibition of dopaminergic neuronsenhanced degradation of α-Syn aggregatesoptogenetic stimulationin vivo expression of NpHR in reactive astrocytes

Objective: Generate donor photoreceptors, engineer them with an optogenetic opsin, transplant them, and assess restoration of visual function.

Why it works: The reported strategy combines donor photoreceptor transplantation with optogenetic engineering so transplanted cells are made light sensitive and can be used in a visual restoration paradigm.

optogenetic light responsiveness conferred by engineered opsin expressioncell transplantation for retinal repairhuman iPSC retinal organoid differentiationdonor photoreceptor engineeringphotoreceptor transplantation

Objective: Control seizure activity using optogenetic interventions selected by target cell type, circuit location, and intervention timing.

Why it works: The supplied evidence indicates that seizure-control strategies are organized across focal targets, cell types, and closed-loop paradigms, implying that intervention efficacy depends on matching optical control mode and timing to the relevant seizure network.

neuronal inhibitionneuronal activationclosed-loop on-demand interventionoptogeneticsreal-time seizure detection

Objective: Engineer a Natronomonas halorhodopsin variant with reduced ER retention and aggregation for improved optogenetic use.

Why it works: The source summary states that adding an N-terminal signal peptide and a C-terminal ER export sequence to NpHR reduces ER retention and aggregation, which is expected to improve membrane localization and thereby increase photocurrents for optogenetic applications.

protein trafficking improvementER export enhancementconstruct engineering

Stages

  1. 1.
    Construct engineering of NpHR trafficking-enhanced variant(library_design)

    This stage exists to redesign the parent NpHR construct so that trafficking defects are reduced before functional optogenetic use.

    Selection: Addition of an N-terminal signal peptide and a C-terminal ER export sequence to address ER retention and aggregation.

  2. 2.
    Functional characterization of engineered construct(functional_characterization)

    This stage exists to determine whether the trafficking-enhanced construct actually improves the properties needed for optogenetic applications.

    Selection: Assessment of membrane localization and photocurrent improvement relative to parent NpHR.

Steps

  1. 1.
    Add N-terminal signal peptide to NpHRparent construct being engineered

    Reduce trafficking-related limitations in the parent halorhodopsin construct.

    The source summary presents construct modification as the first intervention used to address ER retention and aggregation before evaluating function.

  2. 2.
    Add C-terminal ER export sequence to create eNpHRengineered construct output

    Further reduce ER retention and aggregation and produce the enhanced eNpHR construct.

    The source summary describes the ER export addition as part of the engineering changes that yield eNpHR before functional evaluation.

  3. 3.
    Evaluate membrane localization and photocurrents relative to NpHRengineered construct and parent comparator

    Test whether the engineered trafficking changes improve optogenetically relevant performance.

    Functional evaluation follows construct engineering because the paper's goal is to determine whether the modifications improve localization and photocurrent output.

Taxonomy & Function

Primary hierarchy

Mechanism Branch

Component: A low-level protein part used inside a larger architecture that realizes a mechanism.

Techniques

No technique tags yet.

Target processes

degradationlocalizationrecombination

Input: Light

Implementation Constraints

The evidence supports use of NpHR as a genetically encoded microbial rhodopsin for light-based neuronal silencing and in combination with ChR2 for bidirectional control. However, the supplied material does not specify construct architecture, chromophore requirements, delivery method, promoter choice, or illumination wavelength.

The supplied evidence does not provide quantitative performance data such as photocurrent amplitude, spectral peak, kinetics, trafficking efficiency, or expression constraints. Independent validation beyond review-level descriptions is not established from the provided excerpts.

Validation

Cell-freeBacteriaMammalianMouseHumanTherapeuticIndep. Replication

Observations

successMouseapplication demorat

Inferred from claim c2 during normalization. Optogenetic inhibition of CeA CRF neurons reverses escalated alcohol drinking in alcohol-dependent rats. Derived from claim c2.

Source:

Supporting Sources

Ranked Claims

Claim 1behavioral effectsupports2025Source 16needs review

Post-illumination, the NpHR group showed improved contralateral forelimb akinesia compared with the pre-illumination state.

contralateral forelimb akinesia improvement 81.4 %p value 0.0002variation ± 7.2% (71.6-90.9%)
Claim 2mechanistic hypothesissupports2025Source 16needs review

The results suggest that optogenetic modulation of reactive astrocytes alleviates astrocytic aberrant tonic inhibition of dopaminergic neurons and enhances degradation of α-Syn aggregates.

Claim 3therapeutic effectsupports2025Source 17needs review

Optogenetic stimulation attenuates central post-stroke pain.

Claim 4therapeutic effectsupports2025Source 16needs review

Optogenetic stimulation of NpHR expressed in reactive astrocytes in the SNpc of an A53T α-Syn overexpression PD rat model decreased α-Syn aggregates.

p value 0.0001α-Syn aggregate decrease 67.5 %
Claim 5therapeutic effectsupports2025Source 16needs review

Optogenetic stimulation of NpHR expressed in reactive astrocytes in the SNpc of an A53T α-Syn overexpression PD rat model reduced GABA levels.

GABA level reduction 72.6 %p value 0.0486
Claim 6applicationsupports2024Source 20needs review

Channelrhodopsin, archaerhodopsin, and NpHR are examples of optogenetic tools applied in oral and craniofacial research for neural mechanism studies and in vivo oral behavioral test models.

Claim 7application scopesupports2024Source 20needs review

The review covers use of channelrhodopsin, archaerhodopsin, and NpHR in studies of neural mechanisms and oral behavioral test models in vivo including orofacial movement, licking, eating, and drinking.

focusing on the ability to apply optogenetics to the study of basic scientific neural mechanisms and to establish different oral behavioral test models in vivo (orofacial movement, licking, eating, and drinking), such as channelrhodopsin (ChR), archaerhodopsin (Arch), and halorhodopsin from Natronomonas pharaonis (NpHR)
Claim 8tool combination functionsupports2022Source 10needs review

Rhodopsin cyclases can be combined with cyclic nucleotide-gated channels in two-component optogenetics for depolarization or hyperpolarization of membrane potential.

We further show how they can be combined with cyclic nucleotide-gated channels in two-component optogenetics, for depolarization or hyperpolarization of membrane potential.
Claim 9tool combination functionsupports2022Source 10needs review

Rhodopsin cyclases can be combined with cyclic nucleotide-gated channels in two-component optogenetics for depolarization or hyperpolarization of membrane potential.

We further show how they can be combined with cyclic nucleotide-gated channels in two-component optogenetics, for depolarization or hyperpolarization of membrane potential.
Claim 10tool combination functionsupports2022Source 10needs review

Rhodopsin cyclases can be combined with cyclic nucleotide-gated channels in two-component optogenetics for depolarization or hyperpolarization of membrane potential.

We further show how they can be combined with cyclic nucleotide-gated channels in two-component optogenetics, for depolarization or hyperpolarization of membrane potential.
Claim 11tool combination functionsupports2022Source 10needs review

Rhodopsin cyclases can be combined with cyclic nucleotide-gated channels in two-component optogenetics for depolarization or hyperpolarization of membrane potential.

We further show how they can be combined with cyclic nucleotide-gated channels in two-component optogenetics, for depolarization or hyperpolarization of membrane potential.
Claim 12tool combination functionsupports2022Source 10needs review

Rhodopsin cyclases can be combined with cyclic nucleotide-gated channels in two-component optogenetics for depolarization or hyperpolarization of membrane potential.

We further show how they can be combined with cyclic nucleotide-gated channels in two-component optogenetics, for depolarization or hyperpolarization of membrane potential.
Claim 13tool combination functionsupports2022Source 10needs review

Rhodopsin cyclases can be combined with cyclic nucleotide-gated channels in two-component optogenetics for depolarization or hyperpolarization of membrane potential.

We further show how they can be combined with cyclic nucleotide-gated channels in two-component optogenetics, for depolarization or hyperpolarization of membrane potential.
Claim 14tool combination functionsupports2022Source 10needs review

Rhodopsin cyclases can be combined with cyclic nucleotide-gated channels in two-component optogenetics for depolarization or hyperpolarization of membrane potential.

We further show how they can be combined with cyclic nucleotide-gated channels in two-component optogenetics, for depolarization or hyperpolarization of membrane potential.
Claim 15tool combination functionsupports2022Source 10needs review

Rhodopsin cyclases can be combined with cyclic nucleotide-gated channels in two-component optogenetics for depolarization or hyperpolarization of membrane potential.

We further show how they can be combined with cyclic nucleotide-gated channels in two-component optogenetics, for depolarization or hyperpolarization of membrane potential.
Claim 16tool combination functionsupports2022Source 10needs review

Rhodopsin cyclases can be combined with cyclic nucleotide-gated channels in two-component optogenetics for depolarization or hyperpolarization of membrane potential.

We further show how they can be combined with cyclic nucleotide-gated channels in two-component optogenetics, for depolarization or hyperpolarization of membrane potential.
Claim 17tool functionsupports2022Source 10needs review

Channelrhodopsins and their variants conduct cations or anions and are used for depolarization and hyperpolarization of membrane potential.

We address channelrhodopsins and variants thereof, which conduct cations or anions, for depolarization and hyperpolarization of the membrane potential.
Claim 18tool functionsupports2022Source 10needs review

Channelrhodopsins and their variants conduct cations or anions and are used for depolarization and hyperpolarization of membrane potential.

We address channelrhodopsins and variants thereof, which conduct cations or anions, for depolarization and hyperpolarization of the membrane potential.
Claim 19tool functionsupports2022Source 10needs review

Channelrhodopsins and their variants conduct cations or anions and are used for depolarization and hyperpolarization of membrane potential.

We address channelrhodopsins and variants thereof, which conduct cations or anions, for depolarization and hyperpolarization of the membrane potential.
Claim 20tool functionsupports2022Source 10needs review

Channelrhodopsins and their variants conduct cations or anions and are used for depolarization and hyperpolarization of membrane potential.

We address channelrhodopsins and variants thereof, which conduct cations or anions, for depolarization and hyperpolarization of the membrane potential.
Claim 21tool functionsupports2022Source 10needs review

Channelrhodopsins and their variants conduct cations or anions and are used for depolarization and hyperpolarization of membrane potential.

We address channelrhodopsins and variants thereof, which conduct cations or anions, for depolarization and hyperpolarization of the membrane potential.
Claim 22tool functionsupports2022Source 10needs review

Channelrhodopsins and their variants conduct cations or anions and are used for depolarization and hyperpolarization of membrane potential.

We address channelrhodopsins and variants thereof, which conduct cations or anions, for depolarization and hyperpolarization of the membrane potential.
Claim 23tool functionsupports2022Source 10needs review

Channelrhodopsins and their variants conduct cations or anions and are used for depolarization and hyperpolarization of membrane potential.

We address channelrhodopsins and variants thereof, which conduct cations or anions, for depolarization and hyperpolarization of the membrane potential.
Claim 24tool functionsupports2022Source 10needs review

Channelrhodopsins and their variants conduct cations or anions and are used for depolarization and hyperpolarization of membrane potential.

We address channelrhodopsins and variants thereof, which conduct cations or anions, for depolarization and hyperpolarization of the membrane potential.
Claim 25tool functionsupports2022Source 10needs review

Channelrhodopsins and their variants conduct cations or anions and are used for depolarization and hyperpolarization of membrane potential.

We address channelrhodopsins and variants thereof, which conduct cations or anions, for depolarization and hyperpolarization of the membrane potential.
Claim 26tool functionsupports2022Source 10needs review

Rhodopsin guanylyl cyclases and mutated variants with cyclic AMP specificity can regulate intracellular cGMP and cAMP levels.

Last, we report on a new addition to the optogenetic toolbox, which is rhodopsin guanylyl cyclases, as well as mutated variants with specificity for cyclic AMP. These can be used to regulate intracellular levels of cGMP and cAMP, which are important second messengers in sensory and other neurons.
Claim 27tool functionsupports2022Source 10needs review

Rhodopsin guanylyl cyclases and mutated variants with cyclic AMP specificity can regulate intracellular cGMP and cAMP levels.

Last, we report on a new addition to the optogenetic toolbox, which is rhodopsin guanylyl cyclases, as well as mutated variants with specificity for cyclic AMP. These can be used to regulate intracellular levels of cGMP and cAMP, which are important second messengers in sensory and other neurons.
Claim 28tool functionsupports2022Source 10needs review

Rhodopsin guanylyl cyclases and mutated variants with cyclic AMP specificity can regulate intracellular cGMP and cAMP levels.

Last, we report on a new addition to the optogenetic toolbox, which is rhodopsin guanylyl cyclases, as well as mutated variants with specificity for cyclic AMP. These can be used to regulate intracellular levels of cGMP and cAMP, which are important second messengers in sensory and other neurons.
Claim 29tool functionsupports2022Source 10needs review

Rhodopsin guanylyl cyclases and mutated variants with cyclic AMP specificity can regulate intracellular cGMP and cAMP levels.

Last, we report on a new addition to the optogenetic toolbox, which is rhodopsin guanylyl cyclases, as well as mutated variants with specificity for cyclic AMP. These can be used to regulate intracellular levels of cGMP and cAMP, which are important second messengers in sensory and other neurons.
Claim 30tool functionsupports2022Source 10needs review

Rhodopsin guanylyl cyclases and mutated variants with cyclic AMP specificity can regulate intracellular cGMP and cAMP levels.

Last, we report on a new addition to the optogenetic toolbox, which is rhodopsin guanylyl cyclases, as well as mutated variants with specificity for cyclic AMP. These can be used to regulate intracellular levels of cGMP and cAMP, which are important second messengers in sensory and other neurons.
Claim 31tool functionsupports2022Source 10needs review

Rhodopsin guanylyl cyclases and mutated variants with cyclic AMP specificity can regulate intracellular cGMP and cAMP levels.

Last, we report on a new addition to the optogenetic toolbox, which is rhodopsin guanylyl cyclases, as well as mutated variants with specificity for cyclic AMP. These can be used to regulate intracellular levels of cGMP and cAMP, which are important second messengers in sensory and other neurons.
Claim 32tool functionsupports2022Source 10needs review

Rhodopsin guanylyl cyclases and mutated variants with cyclic AMP specificity can regulate intracellular cGMP and cAMP levels.

Last, we report on a new addition to the optogenetic toolbox, which is rhodopsin guanylyl cyclases, as well as mutated variants with specificity for cyclic AMP. These can be used to regulate intracellular levels of cGMP and cAMP, which are important second messengers in sensory and other neurons.
Claim 33tool functionsupports2022Source 10needs review

Rhodopsin guanylyl cyclases and mutated variants with cyclic AMP specificity can regulate intracellular cGMP and cAMP levels.

Last, we report on a new addition to the optogenetic toolbox, which is rhodopsin guanylyl cyclases, as well as mutated variants with specificity for cyclic AMP. These can be used to regulate intracellular levels of cGMP and cAMP, which are important second messengers in sensory and other neurons.
Claim 34tool functionsupports2022Source 10needs review

Rhodopsin guanylyl cyclases and mutated variants with cyclic AMP specificity can regulate intracellular cGMP and cAMP levels.

Last, we report on a new addition to the optogenetic toolbox, which is rhodopsin guanylyl cyclases, as well as mutated variants with specificity for cyclic AMP. These can be used to regulate intracellular levels of cGMP and cAMP, which are important second messengers in sensory and other neurons.
Claim 35causal intervention effectsupports2019Source 7needs review

Optogenetic inhibition of CeA CRF neurons reverses escalated alcohol drinking in alcohol-dependent rats.

Claim 36component usagesupports2019Source 24needs review

The paper used the red-shifted inhibitory opsin Jaws to render donor photoreceptors light sensitive.

the paper transplanted optogenetically engineered photoreceptors, specifically cone-enriched donor populations rendered light sensitive with the red-shifted inhibitory opsin Jaws
Claim 37projection specific effectsupports2019Source 7needs review

Optogenetic inhibition of the CeA→BNST projection reverses escalated alcohol drinking and some withdrawal signs in dependent rats.

Claim 38application scopesupports2018Source 13needs review

GCaMP imaging can be used for imaging individual cells in vitro and neural populations in vivo using fiber photometry.

Claim 39benefit caveat summarymixed2018Source 13needs review

The review highlights both benefits and caveats of optical approaches for acute brain slice studies and functional studies in vivo.

Claim 40field assessmentsupports2018Source 13needs review

Optogenetics and GCaMP imaging have proven useful in dissecting functional circuitry within the brain and are likely to become essential investigative tools for deciphering neural networks controlling hormone secretion.

Claim 41review summarysupports2018Source 13needs review

Optical imaging and optogenetics are transforming functional investigation of neuronal networks throughout the brain.

Claim 42tool adoption rationalesupports2018Source 9needs review

Natronomonas pharaonis halorhodopsin became an optogenetic neural silencer because it is the best-studied homologue, is facile to express and purify, and has advantageous properties.

Claim 43use casesupports2018Source 13needs review

Genetic mouse models combined with light-activated optical tools and GCaMP calcium imaging have been used to interrogate neural circuitry controlling hormone secretion.

Claim 44application scopesupports2017Source 22needs review

Optogenetic tools are well suited to treat retinas with photoreceptor degeneration independently of the underlying mutation.

Claim 45application scopesupports2017Source 19needs review

These optogenetic and chemogenetic toolboxes have enabled advances in deciphering nervous system function and its influence on physiological processes in health and disease.

These novel toolboxes are enabling significant advances in deciphering how the nervous system works and its influence on various physiological processes in health and disease.
Claim 46application scopesupports2017Source 19needs review

These optogenetic and chemogenetic toolboxes have enabled advances in deciphering nervous system function and its influence on physiological processes in health and disease.

These novel toolboxes are enabling significant advances in deciphering how the nervous system works and its influence on various physiological processes in health and disease.
Claim 47application scopesupports2017Source 19needs review

These optogenetic and chemogenetic toolboxes have enabled advances in deciphering nervous system function and its influence on physiological processes in health and disease.

These novel toolboxes are enabling significant advances in deciphering how the nervous system works and its influence on various physiological processes in health and disease.
Claim 48application scopesupports2017Source 19needs review

These optogenetic and chemogenetic toolboxes have enabled advances in deciphering nervous system function and its influence on physiological processes in health and disease.

These novel toolboxes are enabling significant advances in deciphering how the nervous system works and its influence on various physiological processes in health and disease.
Claim 49application scopesupports2017Source 19needs review

These optogenetic and chemogenetic toolboxes have enabled advances in deciphering nervous system function and its influence on physiological processes in health and disease.

These novel toolboxes are enabling significant advances in deciphering how the nervous system works and its influence on various physiological processes in health and disease.
Claim 50application scopesupports2017Source 19needs review

These optogenetic and chemogenetic toolboxes have enabled advances in deciphering nervous system function and its influence on physiological processes in health and disease.

These novel toolboxes are enabling significant advances in deciphering how the nervous system works and its influence on various physiological processes in health and disease.
Claim 51application scopesupports2017Source 19needs review

These optogenetic and chemogenetic toolboxes have enabled advances in deciphering nervous system function and its influence on physiological processes in health and disease.

These novel toolboxes are enabling significant advances in deciphering how the nervous system works and its influence on various physiological processes in health and disease.
Claim 52capabilitysupports2017Source 12needs review

Genetically modified viral vectors broaden the ability to express genes of interest and support inducible manipulations in neural systems.

Claim 53capability summarysupports2017Source 19needs review

Bioengineered light-sensitive ion channels including channelrhodopsins, halorhodopsin, and archaerhodopsins enable light-based artificial modulation of neuronal activity in optogenetics.

Identification and subsequent bioengineering of light-sensitive ion channels (e.g., channelrhodopsins, halorhodopsin, and archaerhodopsins) from the bacteria have made it possible to use light to artificially modulate neuronal activity, namely optogenetics.
Claim 54capability summarysupports2017Source 19needs review

Bioengineered light-sensitive ion channels including channelrhodopsins, halorhodopsin, and archaerhodopsins enable light-based artificial modulation of neuronal activity in optogenetics.

Identification and subsequent bioengineering of light-sensitive ion channels (e.g., channelrhodopsins, halorhodopsin, and archaerhodopsins) from the bacteria have made it possible to use light to artificially modulate neuronal activity, namely optogenetics.
Claim 55capability summarysupports2017Source 19needs review

Bioengineered light-sensitive ion channels including channelrhodopsins, halorhodopsin, and archaerhodopsins enable light-based artificial modulation of neuronal activity in optogenetics.

Identification and subsequent bioengineering of light-sensitive ion channels (e.g., channelrhodopsins, halorhodopsin, and archaerhodopsins) from the bacteria have made it possible to use light to artificially modulate neuronal activity, namely optogenetics.
Claim 56capability summarysupports2017Source 19needs review

Bioengineered light-sensitive ion channels including channelrhodopsins, halorhodopsin, and archaerhodopsins enable light-based artificial modulation of neuronal activity in optogenetics.

Identification and subsequent bioengineering of light-sensitive ion channels (e.g., channelrhodopsins, halorhodopsin, and archaerhodopsins) from the bacteria have made it possible to use light to artificially modulate neuronal activity, namely optogenetics.
Claim 57capability summarysupports2017Source 19needs review

Bioengineered light-sensitive ion channels including channelrhodopsins, halorhodopsin, and archaerhodopsins enable light-based artificial modulation of neuronal activity in optogenetics.

Identification and subsequent bioengineering of light-sensitive ion channels (e.g., channelrhodopsins, halorhodopsin, and archaerhodopsins) from the bacteria have made it possible to use light to artificially modulate neuronal activity, namely optogenetics.
Claim 58capability summarysupports2017Source 19needs review

Bioengineered light-sensitive ion channels including channelrhodopsins, halorhodopsin, and archaerhodopsins enable light-based artificial modulation of neuronal activity in optogenetics.

Identification and subsequent bioengineering of light-sensitive ion channels (e.g., channelrhodopsins, halorhodopsin, and archaerhodopsins) from the bacteria have made it possible to use light to artificially modulate neuronal activity, namely optogenetics.
Claim 59capability summarysupports2017Source 19needs review

Bioengineered light-sensitive ion channels including channelrhodopsins, halorhodopsin, and archaerhodopsins enable light-based artificial modulation of neuronal activity in optogenetics.

Identification and subsequent bioengineering of light-sensitive ion channels (e.g., channelrhodopsins, halorhodopsin, and archaerhodopsins) from the bacteria have made it possible to use light to artificially modulate neuronal activity, namely optogenetics.
Claim 60capability summarysupports2017Source 19needs review

Engineered G protein-coupled receptors activated by otherwise inert drug-like small molecules provide a chemogenetic or pharmacogenetic approach for selective remote control of neuronal activity.

Recent advance in genetics has also allowed development of novel pharmacological tools to selectively and remotely control neuronal activity using engineered G protein-coupled receptors, which can be activated by otherwise inert drug-like small molecules such as the designer receptors exclusively activated by designer drug, a form of chemogenetics.
Claim 61capability summarysupports2017Source 19needs review

Engineered G protein-coupled receptors activated by otherwise inert drug-like small molecules provide a chemogenetic or pharmacogenetic approach for selective remote control of neuronal activity.

Recent advance in genetics has also allowed development of novel pharmacological tools to selectively and remotely control neuronal activity using engineered G protein-coupled receptors, which can be activated by otherwise inert drug-like small molecules such as the designer receptors exclusively activated by designer drug, a form of chemogenetics.
Claim 62capability summarysupports2017Source 19needs review

Engineered G protein-coupled receptors activated by otherwise inert drug-like small molecules provide a chemogenetic or pharmacogenetic approach for selective remote control of neuronal activity.

Recent advance in genetics has also allowed development of novel pharmacological tools to selectively and remotely control neuronal activity using engineered G protein-coupled receptors, which can be activated by otherwise inert drug-like small molecules such as the designer receptors exclusively activated by designer drug, a form of chemogenetics.
Claim 63capability summarysupports2017Source 19needs review

Engineered G protein-coupled receptors activated by otherwise inert drug-like small molecules provide a chemogenetic or pharmacogenetic approach for selective remote control of neuronal activity.

Recent advance in genetics has also allowed development of novel pharmacological tools to selectively and remotely control neuronal activity using engineered G protein-coupled receptors, which can be activated by otherwise inert drug-like small molecules such as the designer receptors exclusively activated by designer drug, a form of chemogenetics.
Claim 64capability summarysupports2017Source 19needs review

Engineered G protein-coupled receptors activated by otherwise inert drug-like small molecules provide a chemogenetic or pharmacogenetic approach for selective remote control of neuronal activity.

Recent advance in genetics has also allowed development of novel pharmacological tools to selectively and remotely control neuronal activity using engineered G protein-coupled receptors, which can be activated by otherwise inert drug-like small molecules such as the designer receptors exclusively activated by designer drug, a form of chemogenetics.
Claim 65capability summarysupports2017Source 19needs review

Engineered G protein-coupled receptors activated by otherwise inert drug-like small molecules provide a chemogenetic or pharmacogenetic approach for selective remote control of neuronal activity.

Recent advance in genetics has also allowed development of novel pharmacological tools to selectively and remotely control neuronal activity using engineered G protein-coupled receptors, which can be activated by otherwise inert drug-like small molecules such as the designer receptors exclusively activated by designer drug, a form of chemogenetics.
Claim 66capability summarysupports2017Source 19needs review

Engineered G protein-coupled receptors activated by otherwise inert drug-like small molecules provide a chemogenetic or pharmacogenetic approach for selective remote control of neuronal activity.

Recent advance in genetics has also allowed development of novel pharmacological tools to selectively and remotely control neuronal activity using engineered G protein-coupled receptors, which can be activated by otherwise inert drug-like small molecules such as the designer receptors exclusively activated by designer drug, a form of chemogenetics.
Claim 67comparative advantagesupports2017Source 12needs review

Chemogenetics can be activated via a systemic drug without indwelling fiber optics and acts in a more naturalistic modulatory fashion through second-messenger pathways than optogenetics.

Claim 68field impactsupports2017Source 12needs review

Optogenetic and chemogenetic approaches allow mechanistic, temporally specific, cell-type-specific, and circuit-specific neural regulation of behaviors.

Claim 69field level assessmentsupports2017Source 19needs review

Optogenetics and pharmacogenetics allow selective and bidirectional modulation of defined neuronal populations with unprecedented specificity.

The cutting-edge optogenetics and pharmacogenetics are powerful tools in neuroscience that allow selective and bidirectional modulation of the activity of defined populations of neurons with unprecedented specificity.
Claim 70field level assessmentsupports2017Source 19needs review

Optogenetics and pharmacogenetics allow selective and bidirectional modulation of defined neuronal populations with unprecedented specificity.

The cutting-edge optogenetics and pharmacogenetics are powerful tools in neuroscience that allow selective and bidirectional modulation of the activity of defined populations of neurons with unprecedented specificity.
Claim 71field level assessmentsupports2017Source 19needs review

Optogenetics and pharmacogenetics allow selective and bidirectional modulation of defined neuronal populations with unprecedented specificity.

The cutting-edge optogenetics and pharmacogenetics are powerful tools in neuroscience that allow selective and bidirectional modulation of the activity of defined populations of neurons with unprecedented specificity.
Claim 72field level assessmentsupports2017Source 19needs review

Optogenetics and pharmacogenetics allow selective and bidirectional modulation of defined neuronal populations with unprecedented specificity.

The cutting-edge optogenetics and pharmacogenetics are powerful tools in neuroscience that allow selective and bidirectional modulation of the activity of defined populations of neurons with unprecedented specificity.
Claim 73field level assessmentsupports2017Source 19needs review

Optogenetics and pharmacogenetics allow selective and bidirectional modulation of defined neuronal populations with unprecedented specificity.

The cutting-edge optogenetics and pharmacogenetics are powerful tools in neuroscience that allow selective and bidirectional modulation of the activity of defined populations of neurons with unprecedented specificity.
Claim 74field level assessmentsupports2017Source 19needs review

Optogenetics and pharmacogenetics allow selective and bidirectional modulation of defined neuronal populations with unprecedented specificity.

The cutting-edge optogenetics and pharmacogenetics are powerful tools in neuroscience that allow selective and bidirectional modulation of the activity of defined populations of neurons with unprecedented specificity.
Claim 75field level assessmentsupports2017Source 19needs review

Optogenetics and pharmacogenetics allow selective and bidirectional modulation of defined neuronal populations with unprecedented specificity.

The cutting-edge optogenetics and pharmacogenetics are powerful tools in neuroscience that allow selective and bidirectional modulation of the activity of defined populations of neurons with unprecedented specificity.
Claim 76mechanismsupports2017Source 22needs review

eNpHR is a chloride pump that mediates light-activated hyperpolarization.

Claim 77therapeutic rationalesupports2017Source 22needs review

Ectopic expression of channelrhodopsin or eNpHR can make inactive photoreceptors or other intact retinal cells sensitive to light, thereby restoring the basic retinal function of light perception.

Claim 78tool statussupports2017Source 12needs review

DREADD technology is presented as the most robust model of chemogenetics.

Claim 79application scopesupports2016Source 3needs review

Combining channelrhodopsin-2 with halorhodopsin enables multimodal remote control of neuronal cells in culture, tissue, and living animals.

The combination of ChR2 with hyperpolarizing-light-driven ion pumps such as the Cl(-) pump halorhodopsin (NpHR) enables multimodal remote control of neuronal cells in culture, tissue, and living animals.
Claim 80application scopesupports2016Source 3needs review

Combining channelrhodopsin-2 with halorhodopsin enables multimodal remote control of neuronal cells in culture, tissue, and living animals.

The combination of ChR2 with hyperpolarizing-light-driven ion pumps such as the Cl(-) pump halorhodopsin (NpHR) enables multimodal remote control of neuronal cells in culture, tissue, and living animals.
Claim 81application scopesupports2016Source 3needs review

Combining channelrhodopsin-2 with halorhodopsin enables multimodal remote control of neuronal cells in culture, tissue, and living animals.

The combination of ChR2 with hyperpolarizing-light-driven ion pumps such as the Cl(-) pump halorhodopsin (NpHR) enables multimodal remote control of neuronal cells in culture, tissue, and living animals.
Claim 82application scopesupports2016Source 3needs review

Combining channelrhodopsin-2 with halorhodopsin enables multimodal remote control of neuronal cells in culture, tissue, and living animals.

The combination of ChR2 with hyperpolarizing-light-driven ion pumps such as the Cl(-) pump halorhodopsin (NpHR) enables multimodal remote control of neuronal cells in culture, tissue, and living animals.
Claim 83application scopesupports2016Source 3needs review

Combining channelrhodopsin-2 with halorhodopsin enables multimodal remote control of neuronal cells in culture, tissue, and living animals.

The combination of ChR2 with hyperpolarizing-light-driven ion pumps such as the Cl(-) pump halorhodopsin (NpHR) enables multimodal remote control of neuronal cells in culture, tissue, and living animals.
Claim 84application scopesupports2016Source 3needs review

Combining channelrhodopsin-2 with halorhodopsin enables multimodal remote control of neuronal cells in culture, tissue, and living animals.

The combination of ChR2 with hyperpolarizing-light-driven ion pumps such as the Cl(-) pump halorhodopsin (NpHR) enables multimodal remote control of neuronal cells in culture, tissue, and living animals.
Claim 85application scopesupports2016Source 3needs review

Combining channelrhodopsin-2 with halorhodopsin enables multimodal remote control of neuronal cells in culture, tissue, and living animals.

The combination of ChR2 with hyperpolarizing-light-driven ion pumps such as the Cl(-) pump halorhodopsin (NpHR) enables multimodal remote control of neuronal cells in culture, tissue, and living animals.
Claim 86mechanism summarysupports2016Source 3needs review

Channelrhodopsin-2 enables activation of electrically excitable cells through light-dependent depolarization.

The most prominent example is channelrhodopsin-2 (ChR2), which allows the activation of electrically excitable cells via light-dependent depolarization.
Claim 87mechanism summarysupports2016Source 3needs review

Channelrhodopsin-2 enables activation of electrically excitable cells through light-dependent depolarization.

The most prominent example is channelrhodopsin-2 (ChR2), which allows the activation of electrically excitable cells via light-dependent depolarization.
Claim 88mechanism summarysupports2016Source 3needs review

Channelrhodopsin-2 enables activation of electrically excitable cells through light-dependent depolarization.

The most prominent example is channelrhodopsin-2 (ChR2), which allows the activation of electrically excitable cells via light-dependent depolarization.
Claim 89mechanism summarysupports2016Source 3needs review

Channelrhodopsin-2 enables activation of electrically excitable cells through light-dependent depolarization.

The most prominent example is channelrhodopsin-2 (ChR2), which allows the activation of electrically excitable cells via light-dependent depolarization.
Claim 90mechanism summarysupports2016Source 3needs review

Channelrhodopsin-2 enables activation of electrically excitable cells through light-dependent depolarization.

The most prominent example is channelrhodopsin-2 (ChR2), which allows the activation of electrically excitable cells via light-dependent depolarization.
Claim 91mechanism summarysupports2016Source 3needs review

Channelrhodopsin-2 enables activation of electrically excitable cells through light-dependent depolarization.

The most prominent example is channelrhodopsin-2 (ChR2), which allows the activation of electrically excitable cells via light-dependent depolarization.
Claim 92mechanism summarysupports2016Source 3needs review

Channelrhodopsin-2 enables activation of electrically excitable cells through light-dependent depolarization.

The most prominent example is channelrhodopsin-2 (ChR2), which allows the activation of electrically excitable cells via light-dependent depolarization.
Claim 93tooling landscapesupports2016Source 14needs review

The review context includes inhibitory opsins, excitatory opsins, closed-loop seizure detection, and luminopsin-based approaches as relevant seizure-control tools or components.

Explicitly supported component/tool names found in these sources include NpHR, ChR2, ArchT, closed-loop real-time seizure detection, and inhibitory luminopsins.
Claim 94functional classificationsupports2015Source 8needs review

Halorhodopsin is an archaeal light-driven Cl- pump.

Claim 95functional classificationsupports2015Source 8needs review

Krokinobacter eikastus rhodopsin 2 is a light-driven Na+ pump.

Claim 96motif taxonomysupports2015Source 8needs review

BR, HR, PR, FR, and KR2 are classified as DTD, TSA, DTE, NTQ, and NDQ rhodopsins, respectively.

Claim 97astrocyte targeting applicationsupports2014Source 1needs review

Light-activated Gq protein-coupled opsins are described as a way to selectively activate astrocytes to explore the influence of gliotransmission on epileptic network function.

The influence of gliotransmission on epileptic network function is another topic of great interest that can be further explored by using light-activated Gq protein-coupled opsins for selective activation of astrocytes.
Claim 98astrocyte targeting applicationsupports2014Source 1needs review

Light-activated Gq protein-coupled opsins are described as a way to selectively activate astrocytes to explore the influence of gliotransmission on epileptic network function.

The influence of gliotransmission on epileptic network function is another topic of great interest that can be further explored by using light-activated Gq protein-coupled opsins for selective activation of astrocytes.
Claim 99astrocyte targeting applicationsupports2014Source 1needs review

Light-activated Gq protein-coupled opsins are described as a way to selectively activate astrocytes to explore the influence of gliotransmission on epileptic network function.

The influence of gliotransmission on epileptic network function is another topic of great interest that can be further explored by using light-activated Gq protein-coupled opsins for selective activation of astrocytes.
Claim 100astrocyte targeting applicationsupports2014Source 1needs review

Light-activated Gq protein-coupled opsins are described as a way to selectively activate astrocytes to explore the influence of gliotransmission on epileptic network function.

The influence of gliotransmission on epileptic network function is another topic of great interest that can be further explored by using light-activated Gq protein-coupled opsins for selective activation of astrocytes.
Claim 101astrocyte targeting applicationsupports2014Source 1needs review

Light-activated Gq protein-coupled opsins are described as a way to selectively activate astrocytes to explore the influence of gliotransmission on epileptic network function.

The influence of gliotransmission on epileptic network function is another topic of great interest that can be further explored by using light-activated Gq protein-coupled opsins for selective activation of astrocytes.
Claim 102astrocyte targeting applicationsupports2014Source 1needs review

Light-activated Gq protein-coupled opsins are described as a way to selectively activate astrocytes to explore the influence of gliotransmission on epileptic network function.

The influence of gliotransmission on epileptic network function is another topic of great interest that can be further explored by using light-activated Gq protein-coupled opsins for selective activation of astrocytes.
Claim 103astrocyte targeting applicationsupports2014Source 1needs review

Light-activated Gq protein-coupled opsins are described as a way to selectively activate astrocytes to explore the influence of gliotransmission on epileptic network function.

The influence of gliotransmission on epileptic network function is another topic of great interest that can be further explored by using light-activated Gq protein-coupled opsins for selective activation of astrocytes.
Claim 104broad capabilitysupports2014Source 1needs review

Channelrhodopsin-2, halorhodopsin, and archaerhodopsin-3 are presented as potent optogenetic candidates for controlling neuronal firing in models of epilepsy and for providing insights into neuronal network organization and synchronization.

The versatility and the electrophysiologic characteristics of the light-sensitive ion-channels channelrhodopsin-2 (ChR2), halorhodopsin (NpHR), and the light-sensitive proton pump archaerhodopsin-3 (Arch) make these optogenetic tools potent candidates in controlling neuronal firing in models of epilepsy and in providing insights into the physiology and pathology of neuronal network organization and synchronization.
Claim 105broad capabilitysupports2014Source 1needs review

Channelrhodopsin-2, halorhodopsin, and archaerhodopsin-3 are presented as potent optogenetic candidates for controlling neuronal firing in models of epilepsy and for providing insights into neuronal network organization and synchronization.

The versatility and the electrophysiologic characteristics of the light-sensitive ion-channels channelrhodopsin-2 (ChR2), halorhodopsin (NpHR), and the light-sensitive proton pump archaerhodopsin-3 (Arch) make these optogenetic tools potent candidates in controlling neuronal firing in models of epilepsy and in providing insights into the physiology and pathology of neuronal network organization and synchronization.
Claim 106broad capabilitysupports2014Source 1needs review

Channelrhodopsin-2, halorhodopsin, and archaerhodopsin-3 are presented as potent optogenetic candidates for controlling neuronal firing in models of epilepsy and for providing insights into neuronal network organization and synchronization.

The versatility and the electrophysiologic characteristics of the light-sensitive ion-channels channelrhodopsin-2 (ChR2), halorhodopsin (NpHR), and the light-sensitive proton pump archaerhodopsin-3 (Arch) make these optogenetic tools potent candidates in controlling neuronal firing in models of epilepsy and in providing insights into the physiology and pathology of neuronal network organization and synchronization.
Claim 107broad capabilitysupports2014Source 1needs review

Channelrhodopsin-2, halorhodopsin, and archaerhodopsin-3 are presented as potent optogenetic candidates for controlling neuronal firing in models of epilepsy and for providing insights into neuronal network organization and synchronization.

The versatility and the electrophysiologic characteristics of the light-sensitive ion-channels channelrhodopsin-2 (ChR2), halorhodopsin (NpHR), and the light-sensitive proton pump archaerhodopsin-3 (Arch) make these optogenetic tools potent candidates in controlling neuronal firing in models of epilepsy and in providing insights into the physiology and pathology of neuronal network organization and synchronization.
Claim 108broad capabilitysupports2014Source 1needs review

Channelrhodopsin-2, halorhodopsin, and archaerhodopsin-3 are presented as potent optogenetic candidates for controlling neuronal firing in models of epilepsy and for providing insights into neuronal network organization and synchronization.

The versatility and the electrophysiologic characteristics of the light-sensitive ion-channels channelrhodopsin-2 (ChR2), halorhodopsin (NpHR), and the light-sensitive proton pump archaerhodopsin-3 (Arch) make these optogenetic tools potent candidates in controlling neuronal firing in models of epilepsy and in providing insights into the physiology and pathology of neuronal network organization and synchronization.
Claim 109broad capabilitysupports2014Source 1needs review

Channelrhodopsin-2, halorhodopsin, and archaerhodopsin-3 are presented as potent optogenetic candidates for controlling neuronal firing in models of epilepsy and for providing insights into neuronal network organization and synchronization.

The versatility and the electrophysiologic characteristics of the light-sensitive ion-channels channelrhodopsin-2 (ChR2), halorhodopsin (NpHR), and the light-sensitive proton pump archaerhodopsin-3 (Arch) make these optogenetic tools potent candidates in controlling neuronal firing in models of epilepsy and in providing insights into the physiology and pathology of neuronal network organization and synchronization.
Claim 110broad capabilitysupports2014Source 1needs review

Channelrhodopsin-2, halorhodopsin, and archaerhodopsin-3 are presented as potent optogenetic candidates for controlling neuronal firing in models of epilepsy and for providing insights into neuronal network organization and synchronization.

The versatility and the electrophysiologic characteristics of the light-sensitive ion-channels channelrhodopsin-2 (ChR2), halorhodopsin (NpHR), and the light-sensitive proton pump archaerhodopsin-3 (Arch) make these optogenetic tools potent candidates in controlling neuronal firing in models of epilepsy and in providing insights into the physiology and pathology of neuronal network organization and synchronization.
Claim 111combinatorial method usesupports2014Source 1needs review

The optogenetic toolbox can be combined with juxtacellular recording and two-photon guided whole-cell recording to help identify specific cortical and hippocampal neuron subtypes altered in epileptic networks.

The ever-growing optogenetic toolbox can also be combined with emerging techniques that have greatly expanded our ability to record specific subtypes of cortical and hippocampal neurons in awake behaving animals such as juxtacellular recording and two-photon guided whole-cell recording, to identify the specific subtypes of neurons that are altered in epileptic networks.
Claim 112combinatorial method usesupports2014Source 1needs review

The optogenetic toolbox can be combined with juxtacellular recording and two-photon guided whole-cell recording to help identify specific cortical and hippocampal neuron subtypes altered in epileptic networks.

The ever-growing optogenetic toolbox can also be combined with emerging techniques that have greatly expanded our ability to record specific subtypes of cortical and hippocampal neurons in awake behaving animals such as juxtacellular recording and two-photon guided whole-cell recording, to identify the specific subtypes of neurons that are altered in epileptic networks.
Claim 113combinatorial method usesupports2014Source 1needs review

The optogenetic toolbox can be combined with juxtacellular recording and two-photon guided whole-cell recording to help identify specific cortical and hippocampal neuron subtypes altered in epileptic networks.

The ever-growing optogenetic toolbox can also be combined with emerging techniques that have greatly expanded our ability to record specific subtypes of cortical and hippocampal neurons in awake behaving animals such as juxtacellular recording and two-photon guided whole-cell recording, to identify the specific subtypes of neurons that are altered in epileptic networks.
Claim 114combinatorial method usesupports2014Source 1needs review

The optogenetic toolbox can be combined with juxtacellular recording and two-photon guided whole-cell recording to help identify specific cortical and hippocampal neuron subtypes altered in epileptic networks.

The ever-growing optogenetic toolbox can also be combined with emerging techniques that have greatly expanded our ability to record specific subtypes of cortical and hippocampal neurons in awake behaving animals such as juxtacellular recording and two-photon guided whole-cell recording, to identify the specific subtypes of neurons that are altered in epileptic networks.
Claim 115combinatorial method usesupports2014Source 1needs review

The optogenetic toolbox can be combined with juxtacellular recording and two-photon guided whole-cell recording to help identify specific cortical and hippocampal neuron subtypes altered in epileptic networks.

The ever-growing optogenetic toolbox can also be combined with emerging techniques that have greatly expanded our ability to record specific subtypes of cortical and hippocampal neurons in awake behaving animals such as juxtacellular recording and two-photon guided whole-cell recording, to identify the specific subtypes of neurons that are altered in epileptic networks.
Claim 116combinatorial method usesupports2014Source 1needs review

The optogenetic toolbox can be combined with juxtacellular recording and two-photon guided whole-cell recording to help identify specific cortical and hippocampal neuron subtypes altered in epileptic networks.

The ever-growing optogenetic toolbox can also be combined with emerging techniques that have greatly expanded our ability to record specific subtypes of cortical and hippocampal neurons in awake behaving animals such as juxtacellular recording and two-photon guided whole-cell recording, to identify the specific subtypes of neurons that are altered in epileptic networks.
Claim 117combinatorial method usesupports2014Source 1needs review

The optogenetic toolbox can be combined with juxtacellular recording and two-photon guided whole-cell recording to help identify specific cortical and hippocampal neuron subtypes altered in epileptic networks.

The ever-growing optogenetic toolbox can also be combined with emerging techniques that have greatly expanded our ability to record specific subtypes of cortical and hippocampal neurons in awake behaving animals such as juxtacellular recording and two-photon guided whole-cell recording, to identify the specific subtypes of neurons that are altered in epileptic networks.
Claim 118seizure suppression capabilitysupports2014Source 1needs review

Optogenetic tools allow rapid and reversible suppression of epileptic EEG activity upon photoactivation.

Finally, optogenetic tools allow rapid and reversible suppression of epileptic electroencephalography (EEG) activity upon photoactivation.
Claim 119seizure suppression capabilitysupports2014Source 1needs review

Optogenetic tools allow rapid and reversible suppression of epileptic EEG activity upon photoactivation.

Finally, optogenetic tools allow rapid and reversible suppression of epileptic electroencephalography (EEG) activity upon photoactivation.
Claim 120seizure suppression capabilitysupports2014Source 1needs review

Optogenetic tools allow rapid and reversible suppression of epileptic EEG activity upon photoactivation.

Finally, optogenetic tools allow rapid and reversible suppression of epileptic electroencephalography (EEG) activity upon photoactivation.
Claim 121seizure suppression capabilitysupports2014Source 1needs review

Optogenetic tools allow rapid and reversible suppression of epileptic EEG activity upon photoactivation.

Finally, optogenetic tools allow rapid and reversible suppression of epileptic electroencephalography (EEG) activity upon photoactivation.
Claim 122seizure suppression capabilitysupports2014Source 1needs review

Optogenetic tools allow rapid and reversible suppression of epileptic EEG activity upon photoactivation.

Finally, optogenetic tools allow rapid and reversible suppression of epileptic electroencephalography (EEG) activity upon photoactivation.
Claim 123seizure suppression capabilitysupports2014Source 1needs review

Optogenetic tools allow rapid and reversible suppression of epileptic EEG activity upon photoactivation.

Finally, optogenetic tools allow rapid and reversible suppression of epileptic electroencephalography (EEG) activity upon photoactivation.
Claim 124seizure suppression capabilitysupports2014Source 1needs review

Optogenetic tools allow rapid and reversible suppression of epileptic EEG activity upon photoactivation.

Finally, optogenetic tools allow rapid and reversible suppression of epileptic electroencephalography (EEG) activity upon photoactivation.
Claim 125selective cell type controlsupports2014Source 1needs review

Opsins allow selective activation of excitatory neurons and inhibitory interneurons, including interneuron subclasses, to study activity patterns in distinct brain states and dissect roles in synchrony and seizures.

Opsins allow selective activation of excitatory neurons and inhibitory interneurons, or subclasses of interneurons, to study their activity patterns in distinct brain-states in vivo and to dissect their role in generation of synchrony and seizures.
Claim 126selective cell type controlsupports2014Source 1needs review

Opsins allow selective activation of excitatory neurons and inhibitory interneurons, including interneuron subclasses, to study activity patterns in distinct brain states and dissect roles in synchrony and seizures.

Opsins allow selective activation of excitatory neurons and inhibitory interneurons, or subclasses of interneurons, to study their activity patterns in distinct brain-states in vivo and to dissect their role in generation of synchrony and seizures.
Claim 127selective cell type controlsupports2014Source 1needs review

Opsins allow selective activation of excitatory neurons and inhibitory interneurons, including interneuron subclasses, to study activity patterns in distinct brain states and dissect roles in synchrony and seizures.

Opsins allow selective activation of excitatory neurons and inhibitory interneurons, or subclasses of interneurons, to study their activity patterns in distinct brain-states in vivo and to dissect their role in generation of synchrony and seizures.
Claim 128selective cell type controlsupports2014Source 1needs review

Opsins allow selective activation of excitatory neurons and inhibitory interneurons, including interneuron subclasses, to study activity patterns in distinct brain states and dissect roles in synchrony and seizures.

Opsins allow selective activation of excitatory neurons and inhibitory interneurons, or subclasses of interneurons, to study their activity patterns in distinct brain-states in vivo and to dissect their role in generation of synchrony and seizures.
Claim 129selective cell type controlsupports2014Source 1needs review

Opsins allow selective activation of excitatory neurons and inhibitory interneurons, including interneuron subclasses, to study activity patterns in distinct brain states and dissect roles in synchrony and seizures.

Opsins allow selective activation of excitatory neurons and inhibitory interneurons, or subclasses of interneurons, to study their activity patterns in distinct brain-states in vivo and to dissect their role in generation of synchrony and seizures.
Claim 130selective cell type controlsupports2014Source 1needs review

Opsins allow selective activation of excitatory neurons and inhibitory interneurons, including interneuron subclasses, to study activity patterns in distinct brain states and dissect roles in synchrony and seizures.

Opsins allow selective activation of excitatory neurons and inhibitory interneurons, or subclasses of interneurons, to study their activity patterns in distinct brain-states in vivo and to dissect their role in generation of synchrony and seizures.
Claim 131selective cell type controlsupports2014Source 1needs review

Opsins allow selective activation of excitatory neurons and inhibitory interneurons, including interneuron subclasses, to study activity patterns in distinct brain states and dissect roles in synchrony and seizures.

Opsins allow selective activation of excitatory neurons and inhibitory interneurons, or subclasses of interneurons, to study their activity patterns in distinct brain-states in vivo and to dissect their role in generation of synchrony and seizures.
Claim 132implementation supportsupports2013Source 18needs review

Long-term in vivo optogenetic studies in this review context rely on implantable optical-fiber strategies for light delivery.

Claim 133method demonstrationsupports2013Source 4needs review

The computational modeling technique was demonstrated using channelrhodopsin-2 and halorhodopsin as examples of optical activation and silencing mechanisms.

It was demonstrated on the example of a two classical mechanisms for cells optical activation and silencing: channelrhodopsin-2 (ChR2) and halorhodopsin (NpHR).
Claim 134method demonstrationsupports2013Source 4needs review

The computational modeling technique was demonstrated using channelrhodopsin-2 and halorhodopsin as examples of optical activation and silencing mechanisms.

It was demonstrated on the example of a two classical mechanisms for cells optical activation and silencing: channelrhodopsin-2 (ChR2) and halorhodopsin (NpHR).
Claim 135method demonstrationsupports2013Source 4needs review

The computational modeling technique was demonstrated using channelrhodopsin-2 and halorhodopsin as examples of optical activation and silencing mechanisms.

It was demonstrated on the example of a two classical mechanisms for cells optical activation and silencing: channelrhodopsin-2 (ChR2) and halorhodopsin (NpHR).
Claim 136method demonstrationsupports2013Source 4needs review

The computational modeling technique was demonstrated using channelrhodopsin-2 and halorhodopsin as examples of optical activation and silencing mechanisms.

It was demonstrated on the example of a two classical mechanisms for cells optical activation and silencing: channelrhodopsin-2 (ChR2) and halorhodopsin (NpHR).
Claim 137method demonstrationsupports2013Source 4needs review

The computational modeling technique was demonstrated using channelrhodopsin-2 and halorhodopsin as examples of optical activation and silencing mechanisms.

It was demonstrated on the example of a two classical mechanisms for cells optical activation and silencing: channelrhodopsin-2 (ChR2) and halorhodopsin (NpHR).
Claim 138method demonstrationsupports2013Source 4needs review

The computational modeling technique was demonstrated using channelrhodopsin-2 and halorhodopsin as examples of optical activation and silencing mechanisms.

It was demonstrated on the example of a two classical mechanisms for cells optical activation and silencing: channelrhodopsin-2 (ChR2) and halorhodopsin (NpHR).
Claim 139method demonstrationsupports2013Source 4needs review

The computational modeling technique was demonstrated using channelrhodopsin-2 and halorhodopsin as examples of optical activation and silencing mechanisms.

It was demonstrated on the example of a two classical mechanisms for cells optical activation and silencing: channelrhodopsin-2 (ChR2) and halorhodopsin (NpHR).
Claim 140methodological emphasissupports2013Source 18needs review

Projection-specific optogenetic manipulation is presented as a central strategy for dissecting stress-related circuitry.

Claim 141method presentationsupports2013Source 4needs review

The paper presents a generalised computational modeling technique for various optogenetic mechanisms implemented in the NEURON simulation environment.

Here we present a generalised computational modeling technique for various types of optogenetic mechanisms, which was implemented in the NEURON simulation environment.
Claim 142method presentationsupports2013Source 4needs review

The paper presents a generalised computational modeling technique for various optogenetic mechanisms implemented in the NEURON simulation environment.

Here we present a generalised computational modeling technique for various types of optogenetic mechanisms, which was implemented in the NEURON simulation environment.
Claim 143method presentationsupports2013Source 4needs review

The paper presents a generalised computational modeling technique for various optogenetic mechanisms implemented in the NEURON simulation environment.

Here we present a generalised computational modeling technique for various types of optogenetic mechanisms, which was implemented in the NEURON simulation environment.
Claim 144method presentationsupports2013Source 4needs review

The paper presents a generalised computational modeling technique for various optogenetic mechanisms implemented in the NEURON simulation environment.

Here we present a generalised computational modeling technique for various types of optogenetic mechanisms, which was implemented in the NEURON simulation environment.
Claim 145method presentationsupports2013Source 4needs review

The paper presents a generalised computational modeling technique for various optogenetic mechanisms implemented in the NEURON simulation environment.

Here we present a generalised computational modeling technique for various types of optogenetic mechanisms, which was implemented in the NEURON simulation environment.
Claim 146method presentationsupports2013Source 4needs review

The paper presents a generalised computational modeling technique for various optogenetic mechanisms implemented in the NEURON simulation environment.

Here we present a generalised computational modeling technique for various types of optogenetic mechanisms, which was implemented in the NEURON simulation environment.
Claim 147method presentationsupports2013Source 4needs review

The paper presents a generalised computational modeling technique for various optogenetic mechanisms implemented in the NEURON simulation environment.

Here we present a generalised computational modeling technique for various types of optogenetic mechanisms, which was implemented in the NEURON simulation environment.
Claim 148simulation findingsupports2013Source 4needs review

In the modeled layer 5 cortical pyramidal neuron, whole-cell illumination of halorhodopsin most effectively hyperpolarizes the neuron and can silence the cell even when driving input is present.

We show that whole-cell illumination of halorhodopsin most effectively hyperpolarizes the neuron and is able to silence the cell even when driving input is present.
Claim 149simulation findingsupports2013Source 4needs review

In the modeled layer 5 cortical pyramidal neuron, whole-cell illumination of halorhodopsin most effectively hyperpolarizes the neuron and can silence the cell even when driving input is present.

We show that whole-cell illumination of halorhodopsin most effectively hyperpolarizes the neuron and is able to silence the cell even when driving input is present.
Claim 150simulation findingsupports2013Source 4needs review

In the modeled layer 5 cortical pyramidal neuron, whole-cell illumination of halorhodopsin most effectively hyperpolarizes the neuron and can silence the cell even when driving input is present.

We show that whole-cell illumination of halorhodopsin most effectively hyperpolarizes the neuron and is able to silence the cell even when driving input is present.
Claim 151simulation findingsupports2013Source 4needs review

In the modeled layer 5 cortical pyramidal neuron, whole-cell illumination of halorhodopsin most effectively hyperpolarizes the neuron and can silence the cell even when driving input is present.

We show that whole-cell illumination of halorhodopsin most effectively hyperpolarizes the neuron and is able to silence the cell even when driving input is present.
Claim 152simulation findingsupports2013Source 4needs review

In the modeled layer 5 cortical pyramidal neuron, whole-cell illumination of halorhodopsin most effectively hyperpolarizes the neuron and can silence the cell even when driving input is present.

We show that whole-cell illumination of halorhodopsin most effectively hyperpolarizes the neuron and is able to silence the cell even when driving input is present.
Claim 153simulation findingsupports2013Source 4needs review

In the modeled layer 5 cortical pyramidal neuron, whole-cell illumination of halorhodopsin most effectively hyperpolarizes the neuron and can silence the cell even when driving input is present.

We show that whole-cell illumination of halorhodopsin most effectively hyperpolarizes the neuron and is able to silence the cell even when driving input is present.
Claim 154simulation findingsupports2013Source 4needs review

When channelrhodopsin-2 and halorhodopsin are concurrently active, the relative location of each illumination determines whether the neural response is modulated toward depolarization.

However, when channelrhodopsin-2 and halorhodopsin are concurrently active, the relative location of each illumination determines whether the response is modulated with a balance towards depolarization.
Claim 155simulation findingsupports2013Source 4needs review

When channelrhodopsin-2 and halorhodopsin are concurrently active, the relative location of each illumination determines whether the neural response is modulated toward depolarization.

However, when channelrhodopsin-2 and halorhodopsin are concurrently active, the relative location of each illumination determines whether the response is modulated with a balance towards depolarization.
Claim 156simulation findingsupports2013Source 4needs review

When channelrhodopsin-2 and halorhodopsin are concurrently active, the relative location of each illumination determines whether the neural response is modulated toward depolarization.

However, when channelrhodopsin-2 and halorhodopsin are concurrently active, the relative location of each illumination determines whether the response is modulated with a balance towards depolarization.
Claim 157simulation findingsupports2013Source 4needs review

When channelrhodopsin-2 and halorhodopsin are concurrently active, the relative location of each illumination determines whether the neural response is modulated toward depolarization.

However, when channelrhodopsin-2 and halorhodopsin are concurrently active, the relative location of each illumination determines whether the response is modulated with a balance towards depolarization.
Claim 158simulation findingsupports2013Source 4needs review

When channelrhodopsin-2 and halorhodopsin are concurrently active, the relative location of each illumination determines whether the neural response is modulated toward depolarization.

However, when channelrhodopsin-2 and halorhodopsin are concurrently active, the relative location of each illumination determines whether the response is modulated with a balance towards depolarization.
Claim 159simulation findingsupports2013Source 4needs review

When channelrhodopsin-2 and halorhodopsin are concurrently active, the relative location of each illumination determines whether the neural response is modulated toward depolarization.

However, when channelrhodopsin-2 and halorhodopsin are concurrently active, the relative location of each illumination determines whether the response is modulated with a balance towards depolarization.
Claim 160targeting strategysupports2013Source 18needs review

The review discusses promoter-based targeting such as CaMKIIα to enrich opsin delivery to selected neuronal populations.

Claim 161toolkit summarysupports2013Source 18needs review

The review discusses both excitatory and inhibitory optogenetic actuators for causal manipulation of stress-related neural circuits.

Claim 162comparative tool positioningsupports2012Source 6needs review

ArchT is presented as an improved archaerhodopsin-family silencer with improved light sensitivity relative to Arch.

Claim 163comparative tool positioningsupports2012Source 6needs review

Mac is presented as a blue-green light-driven proton pump relevant for multicolor silencing.

Claim 164limitation summarysupports2012Source 2needs review

Using optogenetics to control network excitability and associated brain diseases involves challenges and pitfalls.

We also point out some of the challenges and pitfalls in relation to possible outcomes of using optogenetics for controlling network excitability, and associated brain diseases.
Claim 165mechanismsupports2012Source 21needs review

ChR2 responds to blue light to induce neuronal firing via cation influx.

ChR2 responds to blue light to induce neuronal firing via cation influx
Claim 166mechanismsupports2012Source 21needs review

NpHR responds to yellow light to inhibit neuronal activity via chloride influx.

NpHR responds to yellow light to inhibit neuronal activity via Cl- influx
Claim 167mechanism summarysupports2012Source 6needs review

Halorhodopsins are described as light-driven inward chloride pumps used as inhibitory neural silencing tools.

Claim 168methodology summarysupports2012Source 5needs review

In source material connected to this review, ChR2 and NpHR are explicit optogenetic actuators used to interrogate dopamine circuits, while FSCV is an explicit paired measurement method for dopamine release dynamics.

Explicitly supported related components/tools include ChR2, NpHR, fast-scan cyclic voltammetry (FSCV), TH-Cre, DAT-Cre, and recombinase-driver rat lines.
Claim 169property axes reviewedsupports2012Source 6needs review

The review discusses expression, trafficking, spectra, kinetics, and engineering as relevant properties of inhibitory optogenetic silencing tools.

Claim 170review scopesupports2012Source 6needs review

This review centers on inhibitory microbial opsins used for light-driven silencing of targeted neurons.

Claim 171review scope summarysupports2012Source 11needs review

This review summarizes molecular optogenetic tools for perturbing distinct cell types, projections, and intracellular biochemical signaling.

PubMed/PMC confirm the review focuses on molecular optogenetic tools for perturbing distinct cell types, projections, and intracellular biochemical signaling
Claim 172scope summarysupports2012Source 15needs review

The source synthesizes early optogenetic circuit-dissection studies of emotional valence and motivated behaviors, emphasizing ChR2, NpHR/eNpHR3.0, and projection-specific manipulations.

The review synthesizes early optogenetic circuit-dissection work across mesolimbic dopamine, striatum, hypothalamus, and amygdala, emphasizing tools such as ChR2 and NpHR/eNpHR3.0 and projection-specific manipulations.
Claim 173targeting summarysupports2012Source 5needs review

Selective genetic targeting is a central enabling component in dopamine optogenetics, with TH-Cre, DAT-Cre, and recombinase-driver rat lines identified as relevant targeting tools in source material connected to this review.

Explicitly supported related components/tools include ChR2, NpHR, fast-scan cyclic voltammetry (FSCV), TH-Cre, DAT-Cre, and recombinase-driver rat lines.
Claim 174tool class in scopesupports2012Source 11needs review

The review explicitly discusses microbial opsins, including channelrhodopsins, halorhodopsins, and bacteriorhodopsins/archaerhodopsins, as core optogenetic tool classes.

explicitly discusses microbial opsins (including channelrhodopsins, halorhodopsins, bacteriorhodopsins/archaerhodopsins) ... as core tool classes
Claim 175tool class in scopesupports2012Source 11needs review

The review explicitly discusses OptoXRs as a core optogenetic tool class for intracellular signaling control.

explicitly discusses ... OptoXRs as core tool classes
Claim 176use case summarysupports2012Source 2needs review

Inhibitory halorhodopsin NpHR expressed in hippocampal principal cells has been used to effectively control chemically and electrically induced epileptiform activity in slice preparations.

Expression of the inhibitory halorhodopsin NpHR in hippocampal principal cells has been recently used as a tool to effectively control chemically and electrically induced epileptiform activity in slice preparations
Claim 177use case summarysupports2012Source 2needs review

Inhibitory halorhodopsin NpHR has been used to reduce in vivo spiking induced by tetanus toxin injection in the motor cortex.

and to reduce in vivo spiking induced by tetanus toxin injection in the motor cortex.
Claim 178comparison summarysupports2011Source 23needs review

The reviewed remote-control tools differ in effect direction, onset and offset kinetics, spatial resolution, and invasiveness.

Claim 179limitation summarysupports2011Source 23needs review

None of the reviewed neuronal remote-control tools is perfect, and each has advantages and disadvantages.

Claim 180mechanism summarysupports2011Source 23needs review

The reviewed tools use light, peptides, and small molecules to primarily activate ion channels and GPCRs, thereby activating or inhibiting neuronal firing.

Claim 181review scope summarysupports2011Source 23needs review

Remote bidirectional manipulation of neuronal electrical and chemical signaling with high spatiotemporal precision is presented as an ideal approach for linking neural activity to behavior.

Claim 182design modificationsupports2008Source 25needs review

The paper engineers NpHR by adding an N-terminal signal peptide and a C-terminal ER export sequence to create eNpHR.

The paper engineers NpHR to reduce ER retention/aggregation by adding an N-terminal signal peptide and a C-terminal ER export sequence, yielding enhanced NpHR (eNpHR).
Claim 183engineering outcomesupports2008Source 25needs review

eNpHR is an enhanced Natronomonas halorhodopsin engineered for optogenetic applications.

eNpHR: a Natronomonas halorhodopsin enhanced for optogenetic applications
Claim 184performance improvementsupports2008Source 25needs review

eNpHR has improved membrane localization and larger photocurrents relative to the parent NpHR construct.

yielding enhanced NpHR (eNpHR) with improved membrane localization and larger photocurrents

Approval Evidence

21 sources39 linked approval claimsfirst-pass slugs halorhodopsin, halorhodopsin-family, halorhodopsin-from-natronomonas-pharaonis, halorhodopsin-nphr, natronomonas-pharaonis-halorhodopsin, nphr
Halorhodopsin (NpHR), a chloride pump, was expressed in reactive astrocytes within the substantia nigra pars compacta (SNpc) of an A53T α-Syn overexpression PD rat model.

Source:

The web research summary states that the anchor paper used NpHR as the explicit inhibitory opsin.

Source:

such as channelrhodopsin (ChR), archaerhodopsin (Arch), and halorhodopsin from Natronomonas pharaonis (NpHR)

Source:

Also, we cover ion pumping rhodopsins, like halorhodopsin, Mac, and Arch.

Source:

The web research summary states that NpHR is explicitly mentioned in the paper's light-stimulation experiments as another opsin-positive donor-cell condition.

Source:

Halorhodopsin from Natronomonas pharaonis is the best-studied homologue because of its facile expression and purification and its advantageous properties, which was the reason to introduce this protein as neural silencer into the new field of optogenetics.

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We focus on the use of channelrhodopsin and the inhibitory optogenetic tools, archaerhodopsin and halorhodopsin...

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In parallel, a set of inhibitory channels were identified, initially of the 'halorhodopsin' family.

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Identification and subsequent bioengineering of light-sensitive ion channels (e.g., channelrhodopsins, halorhodopsin, and archaerhodopsins) from the bacteria have made it possible to use light to artificially modulate neuronal activity

Source:

The combination of ChR2 with hyperpolarizing-light-driven ion pumps such as the Cl(-) pump halorhodopsin (NpHR) enables multimodal remote control of neuronal cells in culture, tissue, and living animals.

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Explicitly supported component/tool names found in these sources include NpHR, ChR2, ArchT, closed-loop real-time seizure detection, and inhibitory luminopsins.

Source:

Light-driven pumps, such as ... Cl(-) pump halorhodopsin (HR) ... are the main tools in optogenetics.

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behavioral effectsupports

Post-illumination, the NpHR group showed improved contralateral forelimb akinesia compared with the pre-illumination state.

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mechanistic hypothesissupports

The results suggest that optogenetic modulation of reactive astrocytes alleviates astrocytic aberrant tonic inhibition of dopaminergic neurons and enhances degradation of α-Syn aggregates.

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therapeutic effectsupports

Optogenetic stimulation attenuates central post-stroke pain.

Source:

therapeutic effectsupports

Optogenetic stimulation of NpHR expressed in reactive astrocytes in the SNpc of an A53T α-Syn overexpression PD rat model decreased α-Syn aggregates.

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therapeutic effectsupports

Optogenetic stimulation of NpHR expressed in reactive astrocytes in the SNpc of an A53T α-Syn overexpression PD rat model reduced GABA levels.

Source:

applicationsupports

Channelrhodopsin, archaerhodopsin, and NpHR are examples of optogenetic tools applied in oral and craniofacial research for neural mechanism studies and in vivo oral behavioral test models.

Source:

application scopesupports

The review covers use of channelrhodopsin, archaerhodopsin, and NpHR in studies of neural mechanisms and oral behavioral test models in vivo including orofacial movement, licking, eating, and drinking.

focusing on the ability to apply optogenetics to the study of basic scientific neural mechanisms and to establish different oral behavioral test models in vivo (orofacial movement, licking, eating, and drinking), such as channelrhodopsin (ChR), archaerhodopsin (Arch), and halorhodopsin from Natronomonas pharaonis (NpHR)

Source:

benefit caveat summarymixed

The review highlights both benefits and caveats of optical approaches for acute brain slice studies and functional studies in vivo.

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field assessmentsupports

Optogenetics and GCaMP imaging have proven useful in dissecting functional circuitry within the brain and are likely to become essential investigative tools for deciphering neural networks controlling hormone secretion.

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review summarysupports

Optical imaging and optogenetics are transforming functional investigation of neuronal networks throughout the brain.

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tool adoption rationalesupports

Natronomonas pharaonis halorhodopsin became an optogenetic neural silencer because it is the best-studied homologue, is facile to express and purify, and has advantageous properties.

Source:

use casesupports

Genetic mouse models combined with light-activated optical tools and GCaMP calcium imaging have been used to interrogate neural circuitry controlling hormone secretion.

Source:

application scopesupports

These optogenetic and chemogenetic toolboxes have enabled advances in deciphering nervous system function and its influence on physiological processes in health and disease.

These novel toolboxes are enabling significant advances in deciphering how the nervous system works and its influence on various physiological processes in health and disease.

Source:

capability summarysupports

Bioengineered light-sensitive ion channels including channelrhodopsins, halorhodopsin, and archaerhodopsins enable light-based artificial modulation of neuronal activity in optogenetics.

Identification and subsequent bioengineering of light-sensitive ion channels (e.g., channelrhodopsins, halorhodopsin, and archaerhodopsins) from the bacteria have made it possible to use light to artificially modulate neuronal activity, namely optogenetics.

Source:

field level assessmentsupports

Optogenetics and pharmacogenetics allow selective and bidirectional modulation of defined neuronal populations with unprecedented specificity.

The cutting-edge optogenetics and pharmacogenetics are powerful tools in neuroscience that allow selective and bidirectional modulation of the activity of defined populations of neurons with unprecedented specificity.

Source:

application scopesupports

Combining channelrhodopsin-2 with halorhodopsin enables multimodal remote control of neuronal cells in culture, tissue, and living animals.

The combination of ChR2 with hyperpolarizing-light-driven ion pumps such as the Cl(-) pump halorhodopsin (NpHR) enables multimodal remote control of neuronal cells in culture, tissue, and living animals.

Source:

tooling landscapesupports

The review context includes inhibitory opsins, excitatory opsins, closed-loop seizure detection, and luminopsin-based approaches as relevant seizure-control tools or components.

Explicitly supported component/tool names found in these sources include NpHR, ChR2, ArchT, closed-loop real-time seizure detection, and inhibitory luminopsins.

Source:

functional classificationsupports

Halorhodopsin is an archaeal light-driven Cl- pump.

Source:

motif taxonomysupports

BR, HR, PR, FR, and KR2 are classified as DTD, TSA, DTE, NTQ, and NDQ rhodopsins, respectively.

Source:

broad capabilitysupports

Channelrhodopsin-2, halorhodopsin, and archaerhodopsin-3 are presented as potent optogenetic candidates for controlling neuronal firing in models of epilepsy and for providing insights into neuronal network organization and synchronization.

The versatility and the electrophysiologic characteristics of the light-sensitive ion-channels channelrhodopsin-2 (ChR2), halorhodopsin (NpHR), and the light-sensitive proton pump archaerhodopsin-3 (Arch) make these optogenetic tools potent candidates in controlling neuronal firing in models of epilepsy and in providing insights into the physiology and pathology of neuronal network organization and synchronization.

Source:

Comparisons

Source-backed strengths

The evidence identifies NpHR as a hyperpolarizing light-driven Cl(-) pump, which provides a direct mechanism for inhibitory control of membrane potential. It has been used in multimodal remote control experiments across cultured cells, tissue, and living animals when combined with ChR2.

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