Toolkit/in silico feedback control strategies

in silico feedback control strategies

Engineering Method·Research·Since 2022

Also known as: computer-controlled living systems, feedback control

Taxonomy: Technique Branch / Method. Workflows sit above the mechanism and technique branches rather than replacing them.

Summary

In silico feedback control strategies are computationally implemented control schemes coupled to optogenetic measurement and light stimulation platforms. They are used to create computer-controlled living systems through automated measurement and stimulation workflows.

Usefulness & Problems

Why this is useful

These strategies are useful for closing the loop between biological measurement and optical actuation in living systems. The cited review indicates that they operate across optogenetic platforms spanning different cell types and culture volumes, from single-cell stimulation to whole-culture illumination.

Source:

we examine design approaches followed in performing optogenetic experiments spanning different cell types and culture volumes, with induction capabilities ranging from single cell stimulation to entire cell culture illumination

Problem solved

They address the problem of implementing real-time control over living systems using automated experimental platforms. Specifically, the review states that automated measurement and stimulation schemes enabled feedback control strategies in optogenetic systems.

Source:

we examine design approaches followed in performing optogenetic experiments spanning different cell types and culture volumes, with induction capabilities ranging from single cell stimulation to entire cell culture illumination

Taxonomy & Function

Primary hierarchy

Technique Branch

Method: A concrete method used to build, optimize, or evolve an engineered system.

Target processes

No target processes tagged yet.

Input: Light

Implementation Constraints

Implementation requires an optogenetic platform with automated measurement and light-based stimulation capabilities. The supplied evidence supports use across different cell types and culture volumes, but it does not specify hardware configurations, genetic constructs, wavelengths, or software architectures.

The provided evidence is limited to a review-level statement that such strategies have been enabled by automated optogenetic platforms. No specific control algorithms, performance metrics, or comparative validation data are provided in the supplied evidence.

Validation

Cell-freeBacteriaMammalianMouseHumanTherapeuticIndep. Replication

Supporting Sources

Ranked Claims

Claim 1application spansupports2022Source 1needs review

Optogenetic experiment platform designs in the review span different cell types and culture volumes, from single-cell stimulation to whole-culture illumination.

we examine design approaches followed in performing optogenetic experiments spanning different cell types and culture volumes, with induction capabilities ranging from single cell stimulation to entire cell culture illumination
Claim 2application spansupports2022Source 1needs review

Optogenetic experiment platform designs in the review span different cell types and culture volumes, from single-cell stimulation to whole-culture illumination.

we examine design approaches followed in performing optogenetic experiments spanning different cell types and culture volumes, with induction capabilities ranging from single cell stimulation to entire cell culture illumination
Claim 3application spansupports2022Source 1needs review

Optogenetic experiment platform designs in the review span different cell types and culture volumes, from single-cell stimulation to whole-culture illumination.

we examine design approaches followed in performing optogenetic experiments spanning different cell types and culture volumes, with induction capabilities ranging from single cell stimulation to entire cell culture illumination
Claim 4application spansupports2022Source 1needs review

Optogenetic experiment platform designs in the review span different cell types and culture volumes, from single-cell stimulation to whole-culture illumination.

we examine design approaches followed in performing optogenetic experiments spanning different cell types and culture volumes, with induction capabilities ranging from single cell stimulation to entire cell culture illumination
Claim 5application spansupports2022Source 1needs review

Optogenetic experiment platform designs in the review span different cell types and culture volumes, from single-cell stimulation to whole-culture illumination.

we examine design approaches followed in performing optogenetic experiments spanning different cell types and culture volumes, with induction capabilities ranging from single cell stimulation to entire cell culture illumination
Claim 6application spansupports2022Source 1needs review

Optogenetic experiment platform designs in the review span different cell types and culture volumes, from single-cell stimulation to whole-culture illumination.

we examine design approaches followed in performing optogenetic experiments spanning different cell types and culture volumes, with induction capabilities ranging from single cell stimulation to entire cell culture illumination
Claim 7application spansupports2022Source 1needs review

Optogenetic experiment platform designs in the review span different cell types and culture volumes, from single-cell stimulation to whole-culture illumination.

we examine design approaches followed in performing optogenetic experiments spanning different cell types and culture volumes, with induction capabilities ranging from single cell stimulation to entire cell culture illumination
Claim 8automation enables controlsupports2022Source 1needs review

Automated measurement and stimulation schemes on optogenetic platforms have enabled implementation of in silico feedback control strategies for computer-controlled living systems.

The development of automated measurement and stimulation schemes on these platforms has enabled researchers to implement various in silico feedback control strategies to achieve computer-controlled living systems
Claim 9automation enables controlsupports2022Source 1needs review

Automated measurement and stimulation schemes on optogenetic platforms have enabled implementation of in silico feedback control strategies for computer-controlled living systems.

The development of automated measurement and stimulation schemes on these platforms has enabled researchers to implement various in silico feedback control strategies to achieve computer-controlled living systems
Claim 10automation enables controlsupports2022Source 1needs review

Automated measurement and stimulation schemes on optogenetic platforms have enabled implementation of in silico feedback control strategies for computer-controlled living systems.

The development of automated measurement and stimulation schemes on these platforms has enabled researchers to implement various in silico feedback control strategies to achieve computer-controlled living systems
Claim 11automation enables controlsupports2022Source 1needs review

Automated measurement and stimulation schemes on optogenetic platforms have enabled implementation of in silico feedback control strategies for computer-controlled living systems.

The development of automated measurement and stimulation schemes on these platforms has enabled researchers to implement various in silico feedback control strategies to achieve computer-controlled living systems
Claim 12automation enables controlsupports2022Source 1needs review

Automated measurement and stimulation schemes on optogenetic platforms have enabled implementation of in silico feedback control strategies for computer-controlled living systems.

The development of automated measurement and stimulation schemes on these platforms has enabled researchers to implement various in silico feedback control strategies to achieve computer-controlled living systems
Claim 13automation enables controlsupports2022Source 1needs review

Automated measurement and stimulation schemes on optogenetic platforms have enabled implementation of in silico feedback control strategies for computer-controlled living systems.

The development of automated measurement and stimulation schemes on these platforms has enabled researchers to implement various in silico feedback control strategies to achieve computer-controlled living systems
Claim 14automation enables controlsupports2022Source 1needs review

Automated measurement and stimulation schemes on optogenetic platforms have enabled implementation of in silico feedback control strategies for computer-controlled living systems.

The development of automated measurement and stimulation schemes on these platforms has enabled researchers to implement various in silico feedback control strategies to achieve computer-controlled living systems
Claim 15design requirementsupports2022Source 1needs review

Emerging optogenetic applications require light delivery that is consistent, reproducible, and regulated according to application needs.

Emerging optogenetic applications entail a consistent, reproducible, and regulated delivery of light adapted to the application requirement.
Claim 16design requirementsupports2022Source 1needs review

Emerging optogenetic applications require light delivery that is consistent, reproducible, and regulated according to application needs.

Emerging optogenetic applications entail a consistent, reproducible, and regulated delivery of light adapted to the application requirement.
Claim 17design requirementsupports2022Source 1needs review

Emerging optogenetic applications require light delivery that is consistent, reproducible, and regulated according to application needs.

Emerging optogenetic applications entail a consistent, reproducible, and regulated delivery of light adapted to the application requirement.
Claim 18design requirementsupports2022Source 1needs review

Emerging optogenetic applications require light delivery that is consistent, reproducible, and regulated according to application needs.

Emerging optogenetic applications entail a consistent, reproducible, and regulated delivery of light adapted to the application requirement.
Claim 19design requirementsupports2022Source 1needs review

Emerging optogenetic applications require light delivery that is consistent, reproducible, and regulated according to application needs.

Emerging optogenetic applications entail a consistent, reproducible, and regulated delivery of light adapted to the application requirement.
Claim 20design requirementsupports2022Source 1needs review

Emerging optogenetic applications require light delivery that is consistent, reproducible, and regulated according to application needs.

Emerging optogenetic applications entail a consistent, reproducible, and regulated delivery of light adapted to the application requirement.
Claim 21design requirementsupports2022Source 1needs review

Emerging optogenetic applications require light delivery that is consistent, reproducible, and regulated according to application needs.

Emerging optogenetic applications entail a consistent, reproducible, and regulated delivery of light adapted to the application requirement.
Claim 22platform rangesupports2022Source 1needs review

The review covers optogenetic stimulation platform designs ranging from simple illumination set-ups to microscopy, microtiter plate, and bioreactor designs, each with advantages and disadvantages.

we explore the evolution of light-induction hardware-software platforms from simple illumination set-ups to sophisticated microscopy, microtiter plate and bioreactor designs, and discuss their respective advantages and disadvantages
Claim 23platform rangesupports2022Source 1needs review

The review covers optogenetic stimulation platform designs ranging from simple illumination set-ups to microscopy, microtiter plate, and bioreactor designs, each with advantages and disadvantages.

we explore the evolution of light-induction hardware-software platforms from simple illumination set-ups to sophisticated microscopy, microtiter plate and bioreactor designs, and discuss their respective advantages and disadvantages
Claim 24platform rangesupports2022Source 1needs review

The review covers optogenetic stimulation platform designs ranging from simple illumination set-ups to microscopy, microtiter plate, and bioreactor designs, each with advantages and disadvantages.

we explore the evolution of light-induction hardware-software platforms from simple illumination set-ups to sophisticated microscopy, microtiter plate and bioreactor designs, and discuss their respective advantages and disadvantages
Claim 25platform rangesupports2022Source 1needs review

The review covers optogenetic stimulation platform designs ranging from simple illumination set-ups to microscopy, microtiter plate, and bioreactor designs, each with advantages and disadvantages.

we explore the evolution of light-induction hardware-software platforms from simple illumination set-ups to sophisticated microscopy, microtiter plate and bioreactor designs, and discuss their respective advantages and disadvantages
Claim 26platform rangesupports2022Source 1needs review

The review covers optogenetic stimulation platform designs ranging from simple illumination set-ups to microscopy, microtiter plate, and bioreactor designs, each with advantages and disadvantages.

we explore the evolution of light-induction hardware-software platforms from simple illumination set-ups to sophisticated microscopy, microtiter plate and bioreactor designs, and discuss their respective advantages and disadvantages
Claim 27platform rangesupports2022Source 1needs review

The review covers optogenetic stimulation platform designs ranging from simple illumination set-ups to microscopy, microtiter plate, and bioreactor designs, each with advantages and disadvantages.

we explore the evolution of light-induction hardware-software platforms from simple illumination set-ups to sophisticated microscopy, microtiter plate and bioreactor designs, and discuss their respective advantages and disadvantages
Claim 28platform rangesupports2022Source 1needs review

The review covers optogenetic stimulation platform designs ranging from simple illumination set-ups to microscopy, microtiter plate, and bioreactor designs, each with advantages and disadvantages.

we explore the evolution of light-induction hardware-software platforms from simple illumination set-ups to sophisticated microscopy, microtiter plate and bioreactor designs, and discuss their respective advantages and disadvantages
Claim 29review scope summarysupports2022Source 1needs review

Suitable light stimulation platforms are required to stimulate synthetic optogenetic constructs in biological systems.

Light stimulation of a synthetic optogenetic construct in a given biological species can only be achieved via a suitable light stimulation platform.
Claim 30review scope summarysupports2022Source 1needs review

Suitable light stimulation platforms are required to stimulate synthetic optogenetic constructs in biological systems.

Light stimulation of a synthetic optogenetic construct in a given biological species can only be achieved via a suitable light stimulation platform.
Claim 31review scope summarysupports2022Source 1needs review

Suitable light stimulation platforms are required to stimulate synthetic optogenetic constructs in biological systems.

Light stimulation of a synthetic optogenetic construct in a given biological species can only be achieved via a suitable light stimulation platform.
Claim 32review scope summarysupports2022Source 1needs review

Suitable light stimulation platforms are required to stimulate synthetic optogenetic constructs in biological systems.

Light stimulation of a synthetic optogenetic construct in a given biological species can only be achieved via a suitable light stimulation platform.
Claim 33review scope summarysupports2022Source 1needs review

Suitable light stimulation platforms are required to stimulate synthetic optogenetic constructs in biological systems.

Light stimulation of a synthetic optogenetic construct in a given biological species can only be achieved via a suitable light stimulation platform.
Claim 34review scope summarysupports2022Source 1needs review

Suitable light stimulation platforms are required to stimulate synthetic optogenetic constructs in biological systems.

Light stimulation of a synthetic optogenetic construct in a given biological species can only be achieved via a suitable light stimulation platform.
Claim 35review scope summarysupports2022Source 1needs review

Suitable light stimulation platforms are required to stimulate synthetic optogenetic constructs in biological systems.

Light stimulation of a synthetic optogenetic construct in a given biological species can only be achieved via a suitable light stimulation platform.

Approval Evidence

1 source1 linked approval claimfirst-pass slug in-silico-feedback-control-strategies
The development of automated measurement and stimulation schemes on these platforms has enabled researchers to implement various in silico feedback control strategies to achieve computer-controlled living systems

Source:

automation enables controlsupports

Automated measurement and stimulation schemes on optogenetic platforms have enabled implementation of in silico feedback control strategies for computer-controlled living systems.

The development of automated measurement and stimulation schemes on these platforms has enabled researchers to implement various in silico feedback control strategies to achieve computer-controlled living systems

Source:

Comparisons

Source-backed strengths

A key strength is compatibility with automated optogenetic platforms that integrate measurement and stimulation. The reviewed platform designs span multiple biological contexts and scales, including different cell types and culture volumes from single cells to whole cultures.

Ranked Citations

  1. 1.
    StructuralSource 1Frontiers in Bioengineering and Biotechnology2022Claim 1Claim 2Claim 3

    Seeded from load plan for claim c5. Extracted from this source document.