Toolkit/LHCII N-terminal domain

LHCII N-terminal domain

Protein Domain·Research·Since 1999

Taxonomy: Mechanism Branch / Component. Workflows sit above the mechanism and technique branches rather than replacing them.

Summary

The LHCII N-terminal domain is the region of the light-harvesting complex II chlorophyll-protein substrate that contains the phosphothreonine site. In thylakoid studies, illumination induces a reversible conformational change that increases exposure of this N-terminal region, enabling access by endogenous thylakoid protein kinase(s) and increasing susceptibility to tryptic cleavage.

Usefulness & Problems

Why this is useful

This domain is useful as a native light-responsive substrate element for studying how illumination regulates thylakoid protein phosphorylation at the substrate level. It provides an experimentally observed example in which light changes protein accessibility rather than acting only through redox-linked kinase activation.

Problem solved

It helps address the problem of how light controls phosphorylation of LHCII by exposing the phosphothreonine-containing N-terminal region to thylakoid protein kinase(s). The cited work specifically links illumination to increased protease and kinase access through a conformational change in the chlorophyll-protein substrate.

Taxonomy & Function

Primary hierarchy

Mechanism Branch

Component: A low-level protein part used inside a larger architecture that realizes a mechanism.

Techniques

No technique tags yet.

Target processes

recombinationsignaling

Input: Light

Implementation Constraints

The relevant functional feature is the LHCII N-terminal domain containing the phosphothreonine site within the chlorophyll-protein substrate. The reported assays were performed in thylakoid membranes and relied on illumination, endogenous thylakoid protein kinase activity, and tryptic cleavage as a readout of accessibility; no standalone construct design or delivery guidance is provided.

The evidence is limited to characterization of a native thylakoid substrate in the cited study and does not establish this domain as a portable engineered optogenetic module. No quantitative performance metrics, spectral parameters, or heterologous implementation data are provided in the supplied evidence.

Validation

Cell-freeBacteriaMammalianMouseHumanTherapeuticIndep. Replication

Supporting Sources

Source 1primary paper1999Proceedings of the National Academy of Sciences

Ranked Claims

Claim 1mechanismsupports1999Source 1needs review

A light-induced conformational change increases accessibility of the LHCII N-terminal domain, as evidenced by increased tryptic cleavage after light exposure.

The suggested light-induced conformational change exposing the N-terminal domain of LHCII to the kinase is evidenced also by an increase in its accessibility to tryptic cleavage after light exposure.
Claim 2mechanismsupports1999Source 1needs review

A light-induced conformational change increases accessibility of the LHCII N-terminal domain, as evidenced by increased tryptic cleavage after light exposure.

The suggested light-induced conformational change exposing the N-terminal domain of LHCII to the kinase is evidenced also by an increase in its accessibility to tryptic cleavage after light exposure.
Claim 3mechanismsupports1999Source 1needs review

A light-induced conformational change increases accessibility of the LHCII N-terminal domain, as evidenced by increased tryptic cleavage after light exposure.

The suggested light-induced conformational change exposing the N-terminal domain of LHCII to the kinase is evidenced also by an increase in its accessibility to tryptic cleavage after light exposure.
Claim 4mechanismsupports1999Source 1needs review

A light-induced conformational change increases accessibility of the LHCII N-terminal domain, as evidenced by increased tryptic cleavage after light exposure.

The suggested light-induced conformational change exposing the N-terminal domain of LHCII to the kinase is evidenced also by an increase in its accessibility to tryptic cleavage after light exposure.
Claim 5mechanismsupports1999Source 1needs review

A light-induced conformational change increases accessibility of the LHCII N-terminal domain, as evidenced by increased tryptic cleavage after light exposure.

The suggested light-induced conformational change exposing the N-terminal domain of LHCII to the kinase is evidenced also by an increase in its accessibility to tryptic cleavage after light exposure.
Claim 6mechanismsupports1999Source 1needs review

A light-induced conformational change increases accessibility of the LHCII N-terminal domain, as evidenced by increased tryptic cleavage after light exposure.

The suggested light-induced conformational change exposing the N-terminal domain of LHCII to the kinase is evidenced also by an increase in its accessibility to tryptic cleavage after light exposure.
Claim 7mechanismsupports1999Source 1needs review

A light-induced conformational change increases accessibility of the LHCII N-terminal domain, as evidenced by increased tryptic cleavage after light exposure.

The suggested light-induced conformational change exposing the N-terminal domain of LHCII to the kinase is evidenced also by an increase in its accessibility to tryptic cleavage after light exposure.
Claim 8mechanismsupports1999Source 1needs review

Illumination of the chlorophyll-protein substrate exposes the LHCII phosphorylation site to the thylakoid protein kinase.

we find that illumination of the chl-protein substrate exposes the phosphorylation site to the kinase
Claim 9mechanismsupports1999Source 1needs review

Illumination of the chlorophyll-protein substrate exposes the LHCII phosphorylation site to the thylakoid protein kinase.

we find that illumination of the chl-protein substrate exposes the phosphorylation site to the kinase
Claim 10mechanismsupports1999Source 1needs review

Illumination of the chlorophyll-protein substrate exposes the LHCII phosphorylation site to the thylakoid protein kinase.

we find that illumination of the chl-protein substrate exposes the phosphorylation site to the kinase
Claim 11mechanismsupports1999Source 1needs review

Illumination of the chlorophyll-protein substrate exposes the LHCII phosphorylation site to the thylakoid protein kinase.

we find that illumination of the chl-protein substrate exposes the phosphorylation site to the kinase
Claim 12mechanismsupports1999Source 1needs review

Illumination of the chlorophyll-protein substrate exposes the LHCII phosphorylation site to the thylakoid protein kinase.

we find that illumination of the chl-protein substrate exposes the phosphorylation site to the kinase
Claim 13mechanismsupports1999Source 1needs review

Illumination of the chlorophyll-protein substrate exposes the LHCII phosphorylation site to the thylakoid protein kinase.

we find that illumination of the chl-protein substrate exposes the phosphorylation site to the kinase
Claim 14mechanismsupports1999Source 1needs review

Illumination of the chlorophyll-protein substrate exposes the LHCII phosphorylation site to the thylakoid protein kinase.

we find that illumination of the chl-protein substrate exposes the phosphorylation site to the kinase
Claim 15mechanismsupports1999Source 1needs review

Light can regulate thylakoid protein phosphorylation not only through redox-linked kinase activation but also by altering the conformation of the chlorophyll-protein substrate.

These results demonstrate that light may regulate thylakoid protein phosphorylation not only via the signal transduction chain connecting redox reactions to the protein kinase activation, but also by affecting the conformation of the chl-protein substrate.
Claim 16mechanismsupports1999Source 1needs review

Light can regulate thylakoid protein phosphorylation not only through redox-linked kinase activation but also by altering the conformation of the chlorophyll-protein substrate.

These results demonstrate that light may regulate thylakoid protein phosphorylation not only via the signal transduction chain connecting redox reactions to the protein kinase activation, but also by affecting the conformation of the chl-protein substrate.
Claim 17mechanismsupports1999Source 1needs review

Light can regulate thylakoid protein phosphorylation not only through redox-linked kinase activation but also by altering the conformation of the chlorophyll-protein substrate.

These results demonstrate that light may regulate thylakoid protein phosphorylation not only via the signal transduction chain connecting redox reactions to the protein kinase activation, but also by affecting the conformation of the chl-protein substrate.
Claim 18mechanismsupports1999Source 1needs review

Light can regulate thylakoid protein phosphorylation not only through redox-linked kinase activation but also by altering the conformation of the chlorophyll-protein substrate.

These results demonstrate that light may regulate thylakoid protein phosphorylation not only via the signal transduction chain connecting redox reactions to the protein kinase activation, but also by affecting the conformation of the chl-protein substrate.
Claim 19mechanismsupports1999Source 1needs review

Light can regulate thylakoid protein phosphorylation not only through redox-linked kinase activation but also by altering the conformation of the chlorophyll-protein substrate.

These results demonstrate that light may regulate thylakoid protein phosphorylation not only via the signal transduction chain connecting redox reactions to the protein kinase activation, but also by affecting the conformation of the chl-protein substrate.
Claim 20mechanismsupports1999Source 1needs review

Light can regulate thylakoid protein phosphorylation not only through redox-linked kinase activation but also by altering the conformation of the chlorophyll-protein substrate.

These results demonstrate that light may regulate thylakoid protein phosphorylation not only via the signal transduction chain connecting redox reactions to the protein kinase activation, but also by affecting the conformation of the chl-protein substrate.
Claim 21mechanismsupports1999Source 1needs review

Light can regulate thylakoid protein phosphorylation not only through redox-linked kinase activation but also by altering the conformation of the chlorophyll-protein substrate.

These results demonstrate that light may regulate thylakoid protein phosphorylation not only via the signal transduction chain connecting redox reactions to the protein kinase activation, but also by affecting the conformation of the chl-protein substrate.
Claim 22mechanismsupports1999Source 1needs review

Light-induced exposure of the LHCII N-terminal domain to endogenous thylakoid protein kinase(s) and to tryptic cleavage also occurs in thylakoid membranes.

Light-induced exposure of the LHCII N-terminal domain to the endogenous protein kinase(s) and tryptic cleavage occurs also in thylakoid membranes.
Claim 23mechanismsupports1999Source 1needs review

Light-induced exposure of the LHCII N-terminal domain to endogenous thylakoid protein kinase(s) and to tryptic cleavage also occurs in thylakoid membranes.

Light-induced exposure of the LHCII N-terminal domain to the endogenous protein kinase(s) and tryptic cleavage occurs also in thylakoid membranes.
Claim 24mechanismsupports1999Source 1needs review

Light-induced exposure of the LHCII N-terminal domain to endogenous thylakoid protein kinase(s) and to tryptic cleavage also occurs in thylakoid membranes.

Light-induced exposure of the LHCII N-terminal domain to the endogenous protein kinase(s) and tryptic cleavage occurs also in thylakoid membranes.
Claim 25mechanismsupports1999Source 1needs review

Light-induced exposure of the LHCII N-terminal domain to endogenous thylakoid protein kinase(s) and to tryptic cleavage also occurs in thylakoid membranes.

Light-induced exposure of the LHCII N-terminal domain to the endogenous protein kinase(s) and tryptic cleavage occurs also in thylakoid membranes.
Claim 26mechanismsupports1999Source 1needs review

Light-induced exposure of the LHCII N-terminal domain to endogenous thylakoid protein kinase(s) and to tryptic cleavage also occurs in thylakoid membranes.

Light-induced exposure of the LHCII N-terminal domain to the endogenous protein kinase(s) and tryptic cleavage occurs also in thylakoid membranes.
Claim 27mechanismsupports1999Source 1needs review

Light-induced exposure of the LHCII N-terminal domain to endogenous thylakoid protein kinase(s) and to tryptic cleavage also occurs in thylakoid membranes.

Light-induced exposure of the LHCII N-terminal domain to the endogenous protein kinase(s) and tryptic cleavage occurs also in thylakoid membranes.
Claim 28mechanismsupports1999Source 1needs review

Light-induced exposure of the LHCII N-terminal domain to endogenous thylakoid protein kinase(s) and to tryptic cleavage also occurs in thylakoid membranes.

Light-induced exposure of the LHCII N-terminal domain to the endogenous protein kinase(s) and tryptic cleavage occurs also in thylakoid membranes.
Claim 29negative resultsupports1999Source 1needs review

Light does not activate phosphorylation of the LHCII apoprotein or of a pigment-reconstituted recombinant complex lacking the N-terminal domain containing the phosphothreonine site.

Light does not activate the phosphorylation of the LHCII apoprotein nor the recombinant pigment-reconstituted complex lacking the N-terminal domain that contains the phosphothreonine site.
Claim 30negative resultsupports1999Source 1needs review

Light does not activate phosphorylation of the LHCII apoprotein or of a pigment-reconstituted recombinant complex lacking the N-terminal domain containing the phosphothreonine site.

Light does not activate the phosphorylation of the LHCII apoprotein nor the recombinant pigment-reconstituted complex lacking the N-terminal domain that contains the phosphothreonine site.
Claim 31negative resultsupports1999Source 1needs review

Light does not activate phosphorylation of the LHCII apoprotein or of a pigment-reconstituted recombinant complex lacking the N-terminal domain containing the phosphothreonine site.

Light does not activate the phosphorylation of the LHCII apoprotein nor the recombinant pigment-reconstituted complex lacking the N-terminal domain that contains the phosphothreonine site.
Claim 32negative resultsupports1999Source 1needs review

Light does not activate phosphorylation of the LHCII apoprotein or of a pigment-reconstituted recombinant complex lacking the N-terminal domain containing the phosphothreonine site.

Light does not activate the phosphorylation of the LHCII apoprotein nor the recombinant pigment-reconstituted complex lacking the N-terminal domain that contains the phosphothreonine site.
Claim 33negative resultsupports1999Source 1needs review

Light does not activate phosphorylation of the LHCII apoprotein or of a pigment-reconstituted recombinant complex lacking the N-terminal domain containing the phosphothreonine site.

Light does not activate the phosphorylation of the LHCII apoprotein nor the recombinant pigment-reconstituted complex lacking the N-terminal domain that contains the phosphothreonine site.
Claim 34negative resultsupports1999Source 1needs review

Light does not activate phosphorylation of the LHCII apoprotein or of a pigment-reconstituted recombinant complex lacking the N-terminal domain containing the phosphothreonine site.

Light does not activate the phosphorylation of the LHCII apoprotein nor the recombinant pigment-reconstituted complex lacking the N-terminal domain that contains the phosphothreonine site.
Claim 35negative resultsupports1999Source 1needs review

Light does not activate phosphorylation of the LHCII apoprotein or of a pigment-reconstituted recombinant complex lacking the N-terminal domain containing the phosphothreonine site.

Light does not activate the phosphorylation of the LHCII apoprotein nor the recombinant pigment-reconstituted complex lacking the N-terminal domain that contains the phosphothreonine site.
Claim 36preferencesupports1999Source 1needs review

Light activates preferentially the trimeric form of LHCII, in parallel with chlorophyll fluorescence quenching.

Light activates preferentially the trimeric form of LHCII, and the process is paralleled by chl fluorescence quenching.
Claim 37preferencesupports1999Source 1needs review

Light activates preferentially the trimeric form of LHCII, in parallel with chlorophyll fluorescence quenching.

Light activates preferentially the trimeric form of LHCII, and the process is paralleled by chl fluorescence quenching.
Claim 38preferencesupports1999Source 1needs review

Light activates preferentially the trimeric form of LHCII, in parallel with chlorophyll fluorescence quenching.

Light activates preferentially the trimeric form of LHCII, and the process is paralleled by chl fluorescence quenching.
Claim 39preferencesupports1999Source 1needs review

Light activates preferentially the trimeric form of LHCII, in parallel with chlorophyll fluorescence quenching.

Light activates preferentially the trimeric form of LHCII, and the process is paralleled by chl fluorescence quenching.
Claim 40preferencesupports1999Source 1needs review

Light activates preferentially the trimeric form of LHCII, in parallel with chlorophyll fluorescence quenching.

Light activates preferentially the trimeric form of LHCII, and the process is paralleled by chl fluorescence quenching.
Claim 41preferencesupports1999Source 1needs review

Light activates preferentially the trimeric form of LHCII, in parallel with chlorophyll fluorescence quenching.

Light activates preferentially the trimeric form of LHCII, and the process is paralleled by chl fluorescence quenching.
Claim 42preferencesupports1999Source 1needs review

Light activates preferentially the trimeric form of LHCII, in parallel with chlorophyll fluorescence quenching.

Light activates preferentially the trimeric form of LHCII, and the process is paralleled by chl fluorescence quenching.
Claim 43reversibilitysupports1999Source 1needs review

The light-activated LHCII process and associated chlorophyll fluorescence quenching are slowly reversible in darkness.

Both phenomena are slowly reversible in darkness.
Claim 44reversibilitysupports1999Source 1needs review

The light-activated LHCII process and associated chlorophyll fluorescence quenching are slowly reversible in darkness.

Both phenomena are slowly reversible in darkness.
Claim 45reversibilitysupports1999Source 1needs review

The light-activated LHCII process and associated chlorophyll fluorescence quenching are slowly reversible in darkness.

Both phenomena are slowly reversible in darkness.
Claim 46reversibilitysupports1999Source 1needs review

The light-activated LHCII process and associated chlorophyll fluorescence quenching are slowly reversible in darkness.

Both phenomena are slowly reversible in darkness.
Claim 47reversibilitysupports1999Source 1needs review

The light-activated LHCII process and associated chlorophyll fluorescence quenching are slowly reversible in darkness.

Both phenomena are slowly reversible in darkness.
Claim 48reversibilitysupports1999Source 1needs review

The light-activated LHCII process and associated chlorophyll fluorescence quenching are slowly reversible in darkness.

Both phenomena are slowly reversible in darkness.
Claim 49reversibilitysupports1999Source 1needs review

The light-activated LHCII process and associated chlorophyll fluorescence quenching are slowly reversible in darkness.

Both phenomena are slowly reversible in darkness.

Approval Evidence

1 source3 linked approval claimsfirst-pass slug lhcii-n-terminal-domain
the N-terminal domain that contains the phosphothreonine site

Source:

mechanismsupports

A light-induced conformational change increases accessibility of the LHCII N-terminal domain, as evidenced by increased tryptic cleavage after light exposure.

The suggested light-induced conformational change exposing the N-terminal domain of LHCII to the kinase is evidenced also by an increase in its accessibility to tryptic cleavage after light exposure.

Source:

mechanismsupports

Light-induced exposure of the LHCII N-terminal domain to endogenous thylakoid protein kinase(s) and to tryptic cleavage also occurs in thylakoid membranes.

Light-induced exposure of the LHCII N-terminal domain to the endogenous protein kinase(s) and tryptic cleavage occurs also in thylakoid membranes.

Source:

negative resultsupports

Light does not activate phosphorylation of the LHCII apoprotein or of a pigment-reconstituted recombinant complex lacking the N-terminal domain containing the phosphothreonine site.

Light does not activate the phosphorylation of the LHCII apoprotein nor the recombinant pigment-reconstituted complex lacking the N-terminal domain that contains the phosphothreonine site.

Source:

Comparisons

Source-backed strengths

The reported response is supported by two concordant readouts: increased tryptic cleavage and increased exposure of the phosphorylation site to endogenous thylakoid protein kinase(s). The phenomenon was observed in thylakoid membranes, supporting relevance in a native membrane context.

Ranked Citations

  1. 1.
    StructuralSource 1Proceedings of the National Academy of Sciences1999Claim 1Claim 2Claim 3

    Extracted from this source document.