Toolkit/luciferin-luciferase pair

luciferin-luciferase pair

Construct Pattern·Research·Since 2021

Taxonomy: Mechanism Branch / Architecture. Workflows sit above the mechanism and technique branches rather than replacing them.

Summary

The different luciferin-luciferase pairs have different light emission wavelengths and hence are suitable for various applications.

Usefulness & Problems

Why this is useful

A luciferin-luciferase pair generates light when luciferin is oxidized by luciferase to form an excited-state emitter. The review frames these pairs as the core functional units behind many bioluminescence applications.; gene assays; detection of protein-protein interactions; high-throughput screening in drug discovery; in vivo imaging in small mammals

Source:

A luciferin-luciferase pair generates light when luciferin is oxidized by luciferase to form an excited-state emitter. The review frames these pairs as the core functional units behind many bioluminescence applications.

Source:

gene assays

Source:

detection of protein-protein interactions

Source:

high-throughput screening in drug discovery

Source:

in vivo imaging in small mammals

Problem solved

These pairs provide a genetically or chemically addressable light output for assays, interaction detection, screening, and imaging. Their wavelength diversity helps match the reporter to the intended use case.; provides light-generating reporter output for sensing and imaging applications; enables application-specific selection through differing emission wavelengths

Source:

These pairs provide a genetically or chemically addressable light output for assays, interaction detection, screening, and imaging. Their wavelength diversity helps match the reporter to the intended use case.

Source:

provides light-generating reporter output for sensing and imaging applications

Source:

enables application-specific selection through differing emission wavelengths

Problem links

enables application-specific selection through differing emission wavelengths

Literature

These pairs provide a genetically or chemically addressable light output for assays, interaction detection, screening, and imaging. Their wavelength diversity helps match the reporter to the intended use case.

Source:

These pairs provide a genetically or chemically addressable light output for assays, interaction detection, screening, and imaging. Their wavelength diversity helps match the reporter to the intended use case.

provides light-generating reporter output for sensing and imaging applications

Literature

These pairs provide a genetically or chemically addressable light output for assays, interaction detection, screening, and imaging. Their wavelength diversity helps match the reporter to the intended use case.

Source:

These pairs provide a genetically or chemically addressable light output for assays, interaction detection, screening, and imaging. Their wavelength diversity helps match the reporter to the intended use case.

Taxonomy & Function

Primary hierarchy

Mechanism Branch

Architecture: A reusable architecture pattern for arranging parts into an engineered system.

Target processes

recombinationselection

Input: Light

Implementation Constraints

cofactor dependency: cofactor requirement unknownencoding mode: genetically encodedimplementation constraint: context specific validationimplementation constraint: spectral hardware requirementoperating role: sensor

Implementation requires both the small-molecule luciferin and the corresponding luciferase enzyme. Choice of pair also depends on the emission wavelength needed for the application.; requires a luciferin substrate and a luciferase enzyme; application suitability depends on the emission wavelength of the chosen pair

The abstract does not indicate that any single pair is optimal for all applications. It also notes that many bioluminescent systems remain uncharacterised.; only 11 luciferin-luciferase systems are stated to be characterised to date

Validation

Cell-freeBacteriaMammalianMouseHumanTherapeuticIndep. Replication

Supporting Sources

Ranked Claims

Claim 1application summarysupports2021Source 1needs review

Bioluminescence is routinely used for gene assays, protein-protein interaction detection, high-throughput screening in drug discovery, hygiene control, pollution analysis, and in vivo imaging in small mammals.

Claim 2application summarysupports2021Source 1needs review

Different luciferin-luciferase pairs have different emission wavelengths, making them suitable for different applications.

Claim 3field trendsupports2021Source 1needs review

Advances in protein engineering, synthetic chemistry, and physics have expanded luciferins and luciferases into previously uncharted applications over the last decade.

Claim 4mechanism summarysupports2021Source 1needs review

Bioluminescence occurs when luciferin is oxidized by luciferase to form an excited-state species that emits light.

Claim 5scope summarysupports2021Source 1needs review

More than 30 bioluminescent systems are known, but only 11 luciferin-luciferase pairs are stated to have been characterised to date.

Approval Evidence

1 source5 linked approval claimsfirst-pass slug luciferin-luciferase-pair
The different luciferin-luciferase pairs have different light emission wavelengths and hence are suitable for various applications.

Source:

application summarysupports

Bioluminescence is routinely used for gene assays, protein-protein interaction detection, high-throughput screening in drug discovery, hygiene control, pollution analysis, and in vivo imaging in small mammals.

Source:

application summarysupports

Different luciferin-luciferase pairs have different emission wavelengths, making them suitable for different applications.

Source:

field trendsupports

Advances in protein engineering, synthetic chemistry, and physics have expanded luciferins and luciferases into previously uncharted applications over the last decade.

Source:

mechanism summarysupports

Bioluminescence occurs when luciferin is oxidized by luciferase to form an excited-state species that emits light.

Source:

scope summarysupports

More than 30 bioluminescent systems are known, but only 11 luciferin-luciferase pairs are stated to have been characterised to date.

Source:

Comparisons

Source-stated alternatives

The abstract contrasts different luciferin-luciferase pairs rather than naming a single universal system. It implies that alternative pairs are chosen based on wavelength and application fit.

Source:

The abstract contrasts different luciferin-luciferase pairs rather than naming a single universal system. It implies that alternative pairs are chosen based on wavelength and application fit.

Source-backed strengths

different pairs provide different light emission wavelengths; supports a wide range of biotechnology and biomedical applications

Source:

different pairs provide different light emission wavelengths

Source:

supports a wide range of biotechnology and biomedical applications

Compared with CfRhPDE1

luciferin-luciferase pair and CfRhPDE1 address a similar problem space because they share recombination, selection.

Shared frame: same top-level item type; shared target processes: recombination, selection; same primary input modality: light

Compared with CheRiff

luciferin-luciferase pair and CheRiff address a similar problem space because they share recombination, selection.

Shared frame: same top-level item type; shared target processes: recombination, selection; same primary input modality: light

Compared with midbrain organoids

luciferin-luciferase pair and midbrain organoids address a similar problem space because they share recombination, selection.

Shared frame: same top-level item type; shared target processes: recombination, selection; same primary input modality: light

Ranked Citations

  1. 1.
    StructuralSource 1Chemical Society Reviews2021Claim 1Claim 2Claim 3

    Seeded from load plan for claim cl1. Extracted from this source document.