Toolkit/Magnets

Magnets

Multi-Component Switch·Research·Since 2015

Taxonomy: Mechanism Branch / Architecture. Workflows sit above the mechanism and technique branches rather than replacing them.

Summary

Magnets are engineered pairs of distinct light-responsive protein modules derived from the Neurospora crassa photoreceptor Vivid. They act as a multi-component optogenetic switch by converting a native Vivid homodimerization interface into complementary light-dependent heterodimers for protein interaction and recruitment in subcellular volumes.

Usefulness & Problems

Why this is useful

Magnets enable optogenetic control of protein recruitment and interaction with high spatial subcellular confinement. Reported applications include rapid and reversible recruitment of proteins to subcellular organelles, induction of organelle contacts, and reconstitution of OSBP-VAP endoplasmic reticulum-Golgi tethering.

Source:

We validated these “enhanced” Magnets (eMags) by using them to rapidly and reversibly recruit proteins to subcellular organelles, to induce organelle contacts, and to reconstitute OSBP-VAP ER-Golgi tethering implicated in phosphatidylinositol-4-phosphate transport and metabolism.

Source:

Magnets are small modules engineered from the Neurospora crassa photoreceptor Vivid by orthogonalizing the homodimerization interface into complementary heterodimers.

Source:

eMags represent a very effective tool to optogenetically manipulate physiological processes over whole cells or in small subcellular volumes.

Source:

We demonstrate the utility of Magnets as powerful tools that can optogenetically manipulate molecular processes in biological systems.

Problem solved

This tool addresses the need for light-gated, spatially confined control of protein-protein association inside cells. The optimized eMags variant specifically addresses earlier practical constraints by eliminating the need for concatemerization and 28°C preincubation for functionality.

Source:

We validated these “enhanced” Magnets (eMags) by using them to rapidly and reversibly recruit proteins to subcellular organelles, to induce organelle contacts, and to reconstitute OSBP-VAP ER-Golgi tethering implicated in phosphatidylinositol-4-phosphate transport and metabolism.

Source:

We demonstrate the utility of Magnets as powerful tools that can optogenetically manipulate molecular processes in biological systems.

Taxonomy & Function

Primary hierarchy

Mechanism Branch

Architecture: A composed arrangement of multiple parts that instantiates one or more mechanisms.

Techniques

No technique tags yet.

Target processes

No target processes tagged yet.

Input: Light

Implementation Constraints

Magnets are implemented as a two-component system composed of distinct Vivid-derived photoswitch modules engineered to heterodimerize upon illumination. Earlier versions required concatemerization and 28°C cell preincubation, whereas optimized eMags were reported to function without those requirements; the provided evidence does not specify construct architecture beyond derivation from Vivid and use for subcellular recruitment.

The literature indicates that Magnets originally required concatemerization for efficient responses and cell preincubation at 28°C to be functional. The supplied evidence does not provide additional quantitative performance metrics, spectral details, or validation outside the cited subcellular optogenetic applications.

Validation

Cell-freeBacteriaMammalianMouseHumanTherapeuticIndep. Replication

Supporting Sources

Ranked Claims

Claim 1application capabilitysupports2020Source 3needs review

eMags can be used to rapidly and reversibly recruit proteins to subcellular organelles, induce organelle contacts, and reconstitute OSBP-VAP ER-Golgi tethering.

We validated these “enhanced” Magnets (eMags) by using them to rapidly and reversibly recruit proteins to subcellular organelles, to induce organelle contacts, and to reconstitute OSBP-VAP ER-Golgi tethering implicated in phosphatidylinositol-4-phosphate transport and metabolism.
Claim 2application capabilitysupports2020Source 3needs review

eMags can be used to rapidly and reversibly recruit proteins to subcellular organelles, induce organelle contacts, and reconstitute OSBP-VAP ER-Golgi tethering.

We validated these “enhanced” Magnets (eMags) by using them to rapidly and reversibly recruit proteins to subcellular organelles, to induce organelle contacts, and to reconstitute OSBP-VAP ER-Golgi tethering implicated in phosphatidylinositol-4-phosphate transport and metabolism.
Claim 3application capabilitysupports2020Source 3needs review

eMags can be used to rapidly and reversibly recruit proteins to subcellular organelles, induce organelle contacts, and reconstitute OSBP-VAP ER-Golgi tethering.

We validated these “enhanced” Magnets (eMags) by using them to rapidly and reversibly recruit proteins to subcellular organelles, to induce organelle contacts, and to reconstitute OSBP-VAP ER-Golgi tethering implicated in phosphatidylinositol-4-phosphate transport and metabolism.
Claim 4application capabilitysupports2020Source 3needs review

eMags can be used to rapidly and reversibly recruit proteins to subcellular organelles, induce organelle contacts, and reconstitute OSBP-VAP ER-Golgi tethering.

We validated these “enhanced” Magnets (eMags) by using them to rapidly and reversibly recruit proteins to subcellular organelles, to induce organelle contacts, and to reconstitute OSBP-VAP ER-Golgi tethering implicated in phosphatidylinositol-4-phosphate transport and metabolism.
Claim 5application capabilitysupports2020Source 3needs review

eMags can be used to rapidly and reversibly recruit proteins to subcellular organelles, induce organelle contacts, and reconstitute OSBP-VAP ER-Golgi tethering.

We validated these “enhanced” Magnets (eMags) by using them to rapidly and reversibly recruit proteins to subcellular organelles, to induce organelle contacts, and to reconstitute OSBP-VAP ER-Golgi tethering implicated in phosphatidylinositol-4-phosphate transport and metabolism.
Claim 6application capabilitysupports2020Source 3needs review

eMags can be used to rapidly and reversibly recruit proteins to subcellular organelles, induce organelle contacts, and reconstitute OSBP-VAP ER-Golgi tethering.

We validated these “enhanced” Magnets (eMags) by using them to rapidly and reversibly recruit proteins to subcellular organelles, to induce organelle contacts, and to reconstitute OSBP-VAP ER-Golgi tethering implicated in phosphatidylinositol-4-phosphate transport and metabolism.
Claim 7application capabilitysupports2020Source 3needs review

eMags can be used to rapidly and reversibly recruit proteins to subcellular organelles, induce organelle contacts, and reconstitute OSBP-VAP ER-Golgi tethering.

We validated these “enhanced” Magnets (eMags) by using them to rapidly and reversibly recruit proteins to subcellular organelles, to induce organelle contacts, and to reconstitute OSBP-VAP ER-Golgi tethering implicated in phosphatidylinositol-4-phosphate transport and metabolism.
Claim 8engineering improvementsupports2020Source 3needs review

The optimized Magnets pair eMags requires neither concatemerization nor low temperature preincubation.

Here we overcome these limitations by engineering an optimized Magnets pair requiring neither concatemerization nor low temperature preincubation.
Claim 9engineering improvementsupports2020Source 3needs review

The optimized Magnets pair eMags requires neither concatemerization nor low temperature preincubation.

Here we overcome these limitations by engineering an optimized Magnets pair requiring neither concatemerization nor low temperature preincubation.
Claim 10engineering improvementsupports2020Source 3needs review

The optimized Magnets pair eMags requires neither concatemerization nor low temperature preincubation.

Here we overcome these limitations by engineering an optimized Magnets pair requiring neither concatemerization nor low temperature preincubation.
Claim 11engineering improvementsupports2020Source 3needs review

The optimized Magnets pair eMags requires neither concatemerization nor low temperature preincubation.

Here we overcome these limitations by engineering an optimized Magnets pair requiring neither concatemerization nor low temperature preincubation.
Claim 12engineering improvementsupports2020Source 3needs review

The optimized Magnets pair eMags requires neither concatemerization nor low temperature preincubation.

Here we overcome these limitations by engineering an optimized Magnets pair requiring neither concatemerization nor low temperature preincubation.
Claim 13engineering improvementsupports2020Source 3needs review

The optimized Magnets pair eMags requires neither concatemerization nor low temperature preincubation.

Here we overcome these limitations by engineering an optimized Magnets pair requiring neither concatemerization nor low temperature preincubation.
Claim 14engineering improvementsupports2020Source 3needs review

The optimized Magnets pair eMags requires neither concatemerization nor low temperature preincubation.

Here we overcome these limitations by engineering an optimized Magnets pair requiring neither concatemerization nor low temperature preincubation.
Claim 15limitationsupports2020Source 3needs review

Magnets require concatemerization for efficient responses and cell preincubation at 28°C to be functional.

However, Magnets require concatemerization for efficient responses and cell preincubation at 28°C to be functional.
preincubation temperature 28 °C
Claim 16limitationsupports2020Source 3needs review

Magnets require concatemerization for efficient responses and cell preincubation at 28°C to be functional.

However, Magnets require concatemerization for efficient responses and cell preincubation at 28°C to be functional.
preincubation temperature 28 °C
Claim 17limitationsupports2020Source 3needs review

Magnets require concatemerization for efficient responses and cell preincubation at 28°C to be functional.

However, Magnets require concatemerization for efficient responses and cell preincubation at 28°C to be functional.
preincubation temperature 28 °C
Claim 18limitationsupports2020Source 3needs review

Magnets require concatemerization for efficient responses and cell preincubation at 28°C to be functional.

However, Magnets require concatemerization for efficient responses and cell preincubation at 28°C to be functional.
preincubation temperature 28 °C
Claim 19limitationsupports2020Source 3needs review

Magnets require concatemerization for efficient responses and cell preincubation at 28°C to be functional.

However, Magnets require concatemerization for efficient responses and cell preincubation at 28°C to be functional.
preincubation temperature 28 °C
Claim 20limitationsupports2020Source 3needs review

Magnets require concatemerization for efficient responses and cell preincubation at 28°C to be functional.

However, Magnets require concatemerization for efficient responses and cell preincubation at 28°C to be functional.
preincubation temperature 28 °C
Claim 21limitationsupports2020Source 3needs review

Magnets require concatemerization for efficient responses and cell preincubation at 28°C to be functional.

However, Magnets require concatemerization for efficient responses and cell preincubation at 28°C to be functional.
preincubation temperature 28 °C
Claim 22mechanism propertysupports2020Source 3needs review

Both Magnets components require simultaneous photoactivation to interact, enabling high spatiotemporal confinement of dimerization with a single-excitation wavelength.

Both Magnets components, which are well-tolerated as protein fusion partners, are photoreceptors requiring simultaneous photoactivation to interact, enabling high spatiotemporal confinement of dimerization with a single-excitation wavelength.
Claim 23mechanism propertysupports2020Source 3needs review

Both Magnets components require simultaneous photoactivation to interact, enabling high spatiotemporal confinement of dimerization with a single-excitation wavelength.

Both Magnets components, which are well-tolerated as protein fusion partners, are photoreceptors requiring simultaneous photoactivation to interact, enabling high spatiotemporal confinement of dimerization with a single-excitation wavelength.
Claim 24mechanism propertysupports2020Source 3needs review

Both Magnets components require simultaneous photoactivation to interact, enabling high spatiotemporal confinement of dimerization with a single-excitation wavelength.

Both Magnets components, which are well-tolerated as protein fusion partners, are photoreceptors requiring simultaneous photoactivation to interact, enabling high spatiotemporal confinement of dimerization with a single-excitation wavelength.
Claim 25mechanism propertysupports2020Source 3needs review

Both Magnets components require simultaneous photoactivation to interact, enabling high spatiotemporal confinement of dimerization with a single-excitation wavelength.

Both Magnets components, which are well-tolerated as protein fusion partners, are photoreceptors requiring simultaneous photoactivation to interact, enabling high spatiotemporal confinement of dimerization with a single-excitation wavelength.
Claim 26mechanism propertysupports2020Source 3needs review

Both Magnets components require simultaneous photoactivation to interact, enabling high spatiotemporal confinement of dimerization with a single-excitation wavelength.

Both Magnets components, which are well-tolerated as protein fusion partners, are photoreceptors requiring simultaneous photoactivation to interact, enabling high spatiotemporal confinement of dimerization with a single-excitation wavelength.
Claim 27mechanism propertysupports2020Source 3needs review

Both Magnets components require simultaneous photoactivation to interact, enabling high spatiotemporal confinement of dimerization with a single-excitation wavelength.

Both Magnets components, which are well-tolerated as protein fusion partners, are photoreceptors requiring simultaneous photoactivation to interact, enabling high spatiotemporal confinement of dimerization with a single-excitation wavelength.
Claim 28mechanism propertysupports2020Source 3needs review

Both Magnets components require simultaneous photoactivation to interact, enabling high spatiotemporal confinement of dimerization with a single-excitation wavelength.

Both Magnets components, which are well-tolerated as protein fusion partners, are photoreceptors requiring simultaneous photoactivation to interact, enabling high spatiotemporal confinement of dimerization with a single-excitation wavelength.
Claim 29tool origin or designsupports2020Source 3needs review

Magnets are engineered from the Neurospora crassa photoreceptor Vivid by orthogonalizing the homodimerization interface into complementary heterodimers.

Magnets are small modules engineered from the Neurospora crassa photoreceptor Vivid by orthogonalizing the homodimerization interface into complementary heterodimers.
Claim 30tool origin or designsupports2020Source 3needs review

Magnets are engineered from the Neurospora crassa photoreceptor Vivid by orthogonalizing the homodimerization interface into complementary heterodimers.

Magnets are small modules engineered from the Neurospora crassa photoreceptor Vivid by orthogonalizing the homodimerization interface into complementary heterodimers.
Claim 31tool origin or designsupports2020Source 3needs review

Magnets are engineered from the Neurospora crassa photoreceptor Vivid by orthogonalizing the homodimerization interface into complementary heterodimers.

Magnets are small modules engineered from the Neurospora crassa photoreceptor Vivid by orthogonalizing the homodimerization interface into complementary heterodimers.
Claim 32tool origin or designsupports2020Source 3needs review

Magnets are engineered from the Neurospora crassa photoreceptor Vivid by orthogonalizing the homodimerization interface into complementary heterodimers.

Magnets are small modules engineered from the Neurospora crassa photoreceptor Vivid by orthogonalizing the homodimerization interface into complementary heterodimers.
Claim 33tool origin or designsupports2020Source 3needs review

Magnets are engineered from the Neurospora crassa photoreceptor Vivid by orthogonalizing the homodimerization interface into complementary heterodimers.

Magnets are small modules engineered from the Neurospora crassa photoreceptor Vivid by orthogonalizing the homodimerization interface into complementary heterodimers.
Claim 34tool origin or designsupports2020Source 3needs review

Magnets are engineered from the Neurospora crassa photoreceptor Vivid by orthogonalizing the homodimerization interface into complementary heterodimers.

Magnets are small modules engineered from the Neurospora crassa photoreceptor Vivid by orthogonalizing the homodimerization interface into complementary heterodimers.
Claim 35tool origin or designsupports2020Source 3needs review

Magnets are engineered from the Neurospora crassa photoreceptor Vivid by orthogonalizing the homodimerization interface into complementary heterodimers.

Magnets are small modules engineered from the Neurospora crassa photoreceptor Vivid by orthogonalizing the homodimerization interface into complementary heterodimers.
Claim 36utility statementsupports2020Source 3needs review

eMags are presented as an effective tool to optogenetically manipulate physiological processes over whole cells or in small subcellular volumes.

eMags represent a very effective tool to optogenetically manipulate physiological processes over whole cells or in small subcellular volumes.
Claim 37utility statementsupports2020Source 3needs review

eMags are presented as an effective tool to optogenetically manipulate physiological processes over whole cells or in small subcellular volumes.

eMags represent a very effective tool to optogenetically manipulate physiological processes over whole cells or in small subcellular volumes.
Claim 38utility statementsupports2020Source 3needs review

eMags are presented as an effective tool to optogenetically manipulate physiological processes over whole cells or in small subcellular volumes.

eMags represent a very effective tool to optogenetically manipulate physiological processes over whole cells or in small subcellular volumes.
Claim 39utility statementsupports2020Source 3needs review

eMags are presented as an effective tool to optogenetically manipulate physiological processes over whole cells or in small subcellular volumes.

eMags represent a very effective tool to optogenetically manipulate physiological processes over whole cells or in small subcellular volumes.
Claim 40utility statementsupports2020Source 3needs review

eMags are presented as an effective tool to optogenetically manipulate physiological processes over whole cells or in small subcellular volumes.

eMags represent a very effective tool to optogenetically manipulate physiological processes over whole cells or in small subcellular volumes.
Claim 41utility statementsupports2020Source 3needs review

eMags are presented as an effective tool to optogenetically manipulate physiological processes over whole cells or in small subcellular volumes.

eMags represent a very effective tool to optogenetically manipulate physiological processes over whole cells or in small subcellular volumes.
Claim 42utility statementsupports2020Source 3needs review

eMags are presented as an effective tool to optogenetically manipulate physiological processes over whole cells or in small subcellular volumes.

eMags represent a very effective tool to optogenetically manipulate physiological processes over whole cells or in small subcellular volumes.
Claim 43comparative performancesupports2018Source 2needs review

Cry2/CIB1, iLID, and Magnets were compared for the extent of light-dependent dimer occurrence in small subcellular volumes.

Here, we compared and quantified the extent of light-dependent dimer occurrence in small, subcellular volumes controlled by three such tools: Cry2/CIB1, iLID, and Magnets.
Claim 44comparative performancesupports2018Source 2needs review

Cry2/CIB1, iLID, and Magnets were compared for the extent of light-dependent dimer occurrence in small subcellular volumes.

Here, we compared and quantified the extent of light-dependent dimer occurrence in small, subcellular volumes controlled by three such tools: Cry2/CIB1, iLID, and Magnets.
Claim 45comparative performancesupports2018Source 2needs review

Cry2/CIB1, iLID, and Magnets were compared for the extent of light-dependent dimer occurrence in small subcellular volumes.

Here, we compared and quantified the extent of light-dependent dimer occurrence in small, subcellular volumes controlled by three such tools: Cry2/CIB1, iLID, and Magnets.
Claim 46comparative performancesupports2018Source 2needs review

Cry2/CIB1, iLID, and Magnets were compared for the extent of light-dependent dimer occurrence in small subcellular volumes.

Here, we compared and quantified the extent of light-dependent dimer occurrence in small, subcellular volumes controlled by three such tools: Cry2/CIB1, iLID, and Magnets.
Claim 47comparative performancesupports2018Source 2needs review

Cry2/CIB1, iLID, and Magnets were compared for the extent of light-dependent dimer occurrence in small subcellular volumes.

Here, we compared and quantified the extent of light-dependent dimer occurrence in small, subcellular volumes controlled by three such tools: Cry2/CIB1, iLID, and Magnets.
Claim 48comparative performancesupports2018Source 2needs review

Cry2/CIB1, iLID, and Magnets were compared for the extent of light-dependent dimer occurrence in small subcellular volumes.

Here, we compared and quantified the extent of light-dependent dimer occurrence in small, subcellular volumes controlled by three such tools: Cry2/CIB1, iLID, and Magnets.
Claim 49comparative performancesupports2018Source 2needs review

Cry2/CIB1, iLID, and Magnets were compared for the extent of light-dependent dimer occurrence in small subcellular volumes.

Here, we compared and quantified the extent of light-dependent dimer occurrence in small, subcellular volumes controlled by three such tools: Cry2/CIB1, iLID, and Magnets.
Claim 50design rulesupports2018Source 2needs review

Efficient spatial confinement of light-induced dimerization to the illuminated area is achieved when the photosensitive component is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.

Efficient spatial confinement of dimer to the area of illumination is achieved when the photosensitive component of the dimerization pair is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.
Claim 51design rulesupports2018Source 2needs review

Efficient spatial confinement of light-induced dimerization to the illuminated area is achieved when the photosensitive component is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.

Efficient spatial confinement of dimer to the area of illumination is achieved when the photosensitive component of the dimerization pair is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.
Claim 52design rulesupports2018Source 2needs review

Efficient spatial confinement of light-induced dimerization to the illuminated area is achieved when the photosensitive component is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.

Efficient spatial confinement of dimer to the area of illumination is achieved when the photosensitive component of the dimerization pair is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.
Claim 53design rulesupports2018Source 2needs review

Efficient spatial confinement of light-induced dimerization to the illuminated area is achieved when the photosensitive component is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.

Efficient spatial confinement of dimer to the area of illumination is achieved when the photosensitive component of the dimerization pair is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.
Claim 54design rulesupports2018Source 2needs review

Efficient spatial confinement of light-induced dimerization to the illuminated area is achieved when the photosensitive component is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.

Efficient spatial confinement of dimer to the area of illumination is achieved when the photosensitive component of the dimerization pair is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.
Claim 55design rulesupports2018Source 2needs review

Efficient spatial confinement of light-induced dimerization to the illuminated area is achieved when the photosensitive component is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.

Efficient spatial confinement of dimer to the area of illumination is achieved when the photosensitive component of the dimerization pair is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.
Claim 56design rulesupports2018Source 2needs review

Efficient spatial confinement of light-induced dimerization to the illuminated area is achieved when the photosensitive component is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.

Efficient spatial confinement of dimer to the area of illumination is achieved when the photosensitive component of the dimerization pair is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.
Claim 57determinant of spatial confinementsupports2018Source 2needs review

The location of the photoreceptor protein in the dimer pair and its switch-off kinetics determine the subcellular volume of dimer formation and the amount of protein recruited in the illuminated volume.

We show that both the location of the photoreceptor protein(s) in the dimer pair and its (their) switch-off kinetics determine the subcellular volume where dimer formation occurs and the amount of protein recruited in the illuminated volume.
Claim 58determinant of spatial confinementsupports2018Source 2needs review

The location of the photoreceptor protein in the dimer pair and its switch-off kinetics determine the subcellular volume of dimer formation and the amount of protein recruited in the illuminated volume.

We show that both the location of the photoreceptor protein(s) in the dimer pair and its (their) switch-off kinetics determine the subcellular volume where dimer formation occurs and the amount of protein recruited in the illuminated volume.
Claim 59determinant of spatial confinementsupports2018Source 2needs review

The location of the photoreceptor protein in the dimer pair and its switch-off kinetics determine the subcellular volume of dimer formation and the amount of protein recruited in the illuminated volume.

We show that both the location of the photoreceptor protein(s) in the dimer pair and its (their) switch-off kinetics determine the subcellular volume where dimer formation occurs and the amount of protein recruited in the illuminated volume.
Claim 60determinant of spatial confinementsupports2018Source 2needs review

The location of the photoreceptor protein in the dimer pair and its switch-off kinetics determine the subcellular volume of dimer formation and the amount of protein recruited in the illuminated volume.

We show that both the location of the photoreceptor protein(s) in the dimer pair and its (their) switch-off kinetics determine the subcellular volume where dimer formation occurs and the amount of protein recruited in the illuminated volume.
Claim 61determinant of spatial confinementsupports2018Source 2needs review

The location of the photoreceptor protein in the dimer pair and its switch-off kinetics determine the subcellular volume of dimer formation and the amount of protein recruited in the illuminated volume.

We show that both the location of the photoreceptor protein(s) in the dimer pair and its (their) switch-off kinetics determine the subcellular volume where dimer formation occurs and the amount of protein recruited in the illuminated volume.
Claim 62determinant of spatial confinementsupports2018Source 2needs review

The location of the photoreceptor protein in the dimer pair and its switch-off kinetics determine the subcellular volume of dimer formation and the amount of protein recruited in the illuminated volume.

We show that both the location of the photoreceptor protein(s) in the dimer pair and its (their) switch-off kinetics determine the subcellular volume where dimer formation occurs and the amount of protein recruited in the illuminated volume.
Claim 63determinant of spatial confinementsupports2018Source 2needs review

The location of the photoreceptor protein in the dimer pair and its switch-off kinetics determine the subcellular volume of dimer formation and the amount of protein recruited in the illuminated volume.

We show that both the location of the photoreceptor protein(s) in the dimer pair and its (their) switch-off kinetics determine the subcellular volume where dimer formation occurs and the amount of protein recruited in the illuminated volume.
Claim 64tradeoffsupports2018Source 2needs review

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, but with reduced total amount of dimer.

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, although this comes at the expense of the total amount of dimer.
Claim 65tradeoffsupports2018Source 2needs review

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, but with reduced total amount of dimer.

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, although this comes at the expense of the total amount of dimer.
Claim 66tradeoffsupports2018Source 2needs review

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, but with reduced total amount of dimer.

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, although this comes at the expense of the total amount of dimer.
Claim 67tradeoffsupports2018Source 2needs review

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, but with reduced total amount of dimer.

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, although this comes at the expense of the total amount of dimer.
Claim 68tradeoffsupports2018Source 2needs review

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, but with reduced total amount of dimer.

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, although this comes at the expense of the total amount of dimer.
Claim 69tradeoffsupports2018Source 2needs review

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, but with reduced total amount of dimer.

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, although this comes at the expense of the total amount of dimer.
Claim 70tradeoffsupports2018Source 2needs review

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, but with reduced total amount of dimer.

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, although this comes at the expense of the total amount of dimer.
Claim 71application utilitysupports2015Source 1needs review

Magnets can be used as optogenetic tools to manipulate molecular processes in biological systems.

We demonstrate the utility of Magnets as powerful tools that can optogenetically manipulate molecular processes in biological systems.
Claim 72application utilitysupports2015Source 1needs review

Magnets can be used as optogenetic tools to manipulate molecular processes in biological systems.

We demonstrate the utility of Magnets as powerful tools that can optogenetically manipulate molecular processes in biological systems.
Claim 73application utilitysupports2015Source 1needs review

Magnets can be used as optogenetic tools to manipulate molecular processes in biological systems.

We demonstrate the utility of Magnets as powerful tools that can optogenetically manipulate molecular processes in biological systems.
Claim 74application utilitysupports2015Source 1needs review

Magnets can be used as optogenetic tools to manipulate molecular processes in biological systems.

We demonstrate the utility of Magnets as powerful tools that can optogenetically manipulate molecular processes in biological systems.
Claim 75application utilitysupports2015Source 1needs review

Magnets can be used as optogenetic tools to manipulate molecular processes in biological systems.

We demonstrate the utility of Magnets as powerful tools that can optogenetically manipulate molecular processes in biological systems.
Claim 76application utilitysupports2015Source 1needs review

Magnets can be used as optogenetic tools to manipulate molecular processes in biological systems.

We demonstrate the utility of Magnets as powerful tools that can optogenetically manipulate molecular processes in biological systems.
Claim 77application utilitysupports2015Source 1needs review

Magnets can be used as optogenetic tools to manipulate molecular processes in biological systems.

We demonstrate the utility of Magnets as powerful tools that can optogenetically manipulate molecular processes in biological systems.
Claim 78comparative performancesupports2015Source 1needs review

Some Magnets variants have substantially faster kinetics than other conventional dimerization-based blue spectrum photoswitches.

developed several variants, including those with substantially faster kinetics than any of the other conventional dimerization-based blue spectrum photoswitches
Claim 79comparative performancesupports2015Source 1needs review

Some Magnets variants have substantially faster kinetics than other conventional dimerization-based blue spectrum photoswitches.

developed several variants, including those with substantially faster kinetics than any of the other conventional dimerization-based blue spectrum photoswitches
Claim 80comparative performancesupports2015Source 1needs review

Some Magnets variants have substantially faster kinetics than other conventional dimerization-based blue spectrum photoswitches.

developed several variants, including those with substantially faster kinetics than any of the other conventional dimerization-based blue spectrum photoswitches
Claim 81comparative performancesupports2015Source 1needs review

Some Magnets variants have substantially faster kinetics than other conventional dimerization-based blue spectrum photoswitches.

developed several variants, including those with substantially faster kinetics than any of the other conventional dimerization-based blue spectrum photoswitches
Claim 82comparative performancesupports2015Source 1needs review

Some Magnets variants have substantially faster kinetics than other conventional dimerization-based blue spectrum photoswitches.

developed several variants, including those with substantially faster kinetics than any of the other conventional dimerization-based blue spectrum photoswitches
Claim 83comparative performancesupports2015Source 1needs review

Some Magnets variants have substantially faster kinetics than other conventional dimerization-based blue spectrum photoswitches.

developed several variants, including those with substantially faster kinetics than any of the other conventional dimerization-based blue spectrum photoswitches
Claim 84comparative performancesupports2015Source 1needs review

Some Magnets variants have substantially faster kinetics than other conventional dimerization-based blue spectrum photoswitches.

developed several variants, including those with substantially faster kinetics than any of the other conventional dimerization-based blue spectrum photoswitches
Claim 85engineering resultsupports2015Source 1needs review

The authors engineered the fungal photoreceptor Vivid to develop pairs of distinct photoswitches called Magnets.

we completed a multi-directional engineering of the fungal photoreceptor Vivid to develop pairs of distinct photoswitches named Magnets
Claim 86engineering resultsupports2015Source 1needs review

The authors engineered the fungal photoreceptor Vivid to develop pairs of distinct photoswitches called Magnets.

we completed a multi-directional engineering of the fungal photoreceptor Vivid to develop pairs of distinct photoswitches named Magnets
Claim 87engineering resultsupports2015Source 1needs review

The authors engineered the fungal photoreceptor Vivid to develop pairs of distinct photoswitches called Magnets.

we completed a multi-directional engineering of the fungal photoreceptor Vivid to develop pairs of distinct photoswitches named Magnets
Claim 88engineering resultsupports2015Source 1needs review

The authors engineered the fungal photoreceptor Vivid to develop pairs of distinct photoswitches called Magnets.

we completed a multi-directional engineering of the fungal photoreceptor Vivid to develop pairs of distinct photoswitches named Magnets
Claim 89engineering resultsupports2015Source 1needs review

The authors engineered the fungal photoreceptor Vivid to develop pairs of distinct photoswitches called Magnets.

we completed a multi-directional engineering of the fungal photoreceptor Vivid to develop pairs of distinct photoswitches named Magnets
Claim 90engineering resultsupports2015Source 1needs review

The authors engineered the fungal photoreceptor Vivid to develop pairs of distinct photoswitches called Magnets.

we completed a multi-directional engineering of the fungal photoreceptor Vivid to develop pairs of distinct photoswitches named Magnets
Claim 91engineering resultsupports2015Source 1needs review

The authors engineered the fungal photoreceptor Vivid to develop pairs of distinct photoswitches called Magnets.

we completed a multi-directional engineering of the fungal photoreceptor Vivid to develop pairs of distinct photoswitches named Magnets
Claim 92kinetic tuningsupports2015Source 1needs review

The switch-off kinetics of Magnets were tuned across four orders of magnitude.

we tuned the switch-off kinetics by four orders of magnitude
switch-off kinetics tuning range four orders of magnitude
Claim 93kinetic tuningsupports2015Source 1needs review

The switch-off kinetics of Magnets were tuned across four orders of magnitude.

we tuned the switch-off kinetics by four orders of magnitude
switch-off kinetics tuning range four orders of magnitude
Claim 94kinetic tuningsupports2015Source 1needs review

The switch-off kinetics of Magnets were tuned across four orders of magnitude.

we tuned the switch-off kinetics by four orders of magnitude
switch-off kinetics tuning range four orders of magnitude
Claim 95kinetic tuningsupports2015Source 1needs review

The switch-off kinetics of Magnets were tuned across four orders of magnitude.

we tuned the switch-off kinetics by four orders of magnitude
switch-off kinetics tuning range four orders of magnitude
Claim 96kinetic tuningsupports2015Source 1needs review

The switch-off kinetics of Magnets were tuned across four orders of magnitude.

we tuned the switch-off kinetics by four orders of magnitude
switch-off kinetics tuning range four orders of magnitude
Claim 97kinetic tuningsupports2015Source 1needs review

The switch-off kinetics of Magnets were tuned across four orders of magnitude.

we tuned the switch-off kinetics by four orders of magnitude
switch-off kinetics tuning range four orders of magnitude
Claim 98kinetic tuningsupports2015Source 1needs review

The switch-off kinetics of Magnets were tuned across four orders of magnitude.

we tuned the switch-off kinetics by four orders of magnitude
switch-off kinetics tuning range four orders of magnitude
Claim 99mechanism propertysupports2015Source 1needs review

Magnets were engineered to recognize each other through electrostatic interactions, preventing homodimerization and enhancing light-induced heterodimerization.

These new photoswitches were engineered to recognize each other based on the electrostatic interactions, thus preventing homodimerization and enhancing light-induced heterodimerization.
Claim 100mechanism propertysupports2015Source 1needs review

Magnets were engineered to recognize each other through electrostatic interactions, preventing homodimerization and enhancing light-induced heterodimerization.

These new photoswitches were engineered to recognize each other based on the electrostatic interactions, thus preventing homodimerization and enhancing light-induced heterodimerization.
Claim 101mechanism propertysupports2015Source 1needs review

Magnets were engineered to recognize each other through electrostatic interactions, preventing homodimerization and enhancing light-induced heterodimerization.

These new photoswitches were engineered to recognize each other based on the electrostatic interactions, thus preventing homodimerization and enhancing light-induced heterodimerization.
Claim 102mechanism propertysupports2015Source 1needs review

Magnets were engineered to recognize each other through electrostatic interactions, preventing homodimerization and enhancing light-induced heterodimerization.

These new photoswitches were engineered to recognize each other based on the electrostatic interactions, thus preventing homodimerization and enhancing light-induced heterodimerization.
Claim 103mechanism propertysupports2015Source 1needs review

Magnets were engineered to recognize each other through electrostatic interactions, preventing homodimerization and enhancing light-induced heterodimerization.

These new photoswitches were engineered to recognize each other based on the electrostatic interactions, thus preventing homodimerization and enhancing light-induced heterodimerization.
Claim 104mechanism propertysupports2015Source 1needs review

Magnets were engineered to recognize each other through electrostatic interactions, preventing homodimerization and enhancing light-induced heterodimerization.

These new photoswitches were engineered to recognize each other based on the electrostatic interactions, thus preventing homodimerization and enhancing light-induced heterodimerization.
Claim 105mechanism propertysupports2015Source 1needs review

Magnets were engineered to recognize each other through electrostatic interactions, preventing homodimerization and enhancing light-induced heterodimerization.

These new photoswitches were engineered to recognize each other based on the electrostatic interactions, thus preventing homodimerization and enhancing light-induced heterodimerization.

Approval Evidence

3 sources12 linked approval claimsfirst-pass slug magnets
Magnets are small modules engineered from the Neurospora crassa photoreceptor Vivid by orthogonalizing the homodimerization interface into complementary heterodimers.

Source:

Here, we compared and quantified the extent of light-dependent dimer occurrence in small, subcellular volumes controlled by three such tools: Cry2/CIB1, iLID, and Magnets.

Source:

pairs of distinct photoswitches named Magnets

Source:

limitationsupports

Magnets require concatemerization for efficient responses and cell preincubation at 28°C to be functional.

However, Magnets require concatemerization for efficient responses and cell preincubation at 28°C to be functional.

Source:

mechanism propertysupports

Both Magnets components require simultaneous photoactivation to interact, enabling high spatiotemporal confinement of dimerization with a single-excitation wavelength.

Both Magnets components, which are well-tolerated as protein fusion partners, are photoreceptors requiring simultaneous photoactivation to interact, enabling high spatiotemporal confinement of dimerization with a single-excitation wavelength.

Source:

tool origin or designsupports

Magnets are engineered from the Neurospora crassa photoreceptor Vivid by orthogonalizing the homodimerization interface into complementary heterodimers.

Magnets are small modules engineered from the Neurospora crassa photoreceptor Vivid by orthogonalizing the homodimerization interface into complementary heterodimers.

Source:

comparative performancesupports

Cry2/CIB1, iLID, and Magnets were compared for the extent of light-dependent dimer occurrence in small subcellular volumes.

Here, we compared and quantified the extent of light-dependent dimer occurrence in small, subcellular volumes controlled by three such tools: Cry2/CIB1, iLID, and Magnets.

Source:

design rulesupports

Efficient spatial confinement of light-induced dimerization to the illuminated area is achieved when the photosensitive component is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.

Efficient spatial confinement of dimer to the area of illumination is achieved when the photosensitive component of the dimerization pair is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.

Source:

determinant of spatial confinementsupports

The location of the photoreceptor protein in the dimer pair and its switch-off kinetics determine the subcellular volume of dimer formation and the amount of protein recruited in the illuminated volume.

We show that both the location of the photoreceptor protein(s) in the dimer pair and its (their) switch-off kinetics determine the subcellular volume where dimer formation occurs and the amount of protein recruited in the illuminated volume.

Source:

tradeoffsupports

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, but with reduced total amount of dimer.

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, although this comes at the expense of the total amount of dimer.

Source:

application utilitysupports

Magnets can be used as optogenetic tools to manipulate molecular processes in biological systems.

We demonstrate the utility of Magnets as powerful tools that can optogenetically manipulate molecular processes in biological systems.

Source:

comparative performancesupports

Some Magnets variants have substantially faster kinetics than other conventional dimerization-based blue spectrum photoswitches.

developed several variants, including those with substantially faster kinetics than any of the other conventional dimerization-based blue spectrum photoswitches

Source:

engineering resultsupports

The authors engineered the fungal photoreceptor Vivid to develop pairs of distinct photoswitches called Magnets.

we completed a multi-directional engineering of the fungal photoreceptor Vivid to develop pairs of distinct photoswitches named Magnets

Source:

kinetic tuningsupports

The switch-off kinetics of Magnets were tuned across four orders of magnitude.

we tuned the switch-off kinetics by four orders of magnitude

Source:

mechanism propertysupports

Magnets were engineered to recognize each other through electrostatic interactions, preventing homodimerization and enhancing light-induced heterodimerization.

These new photoswitches were engineered to recognize each other based on the electrostatic interactions, thus preventing homodimerization and enhancing light-induced heterodimerization.

Source:

Comparisons

Source-backed strengths

Magnets were engineered as complementary heterodimeric photoswitches from the small fungal photoreceptor Vivid, and they have been quantitatively compared with Cry2/CIB1 and iLID for light-dependent dimer occurrence in small subcellular volumes. The optimized eMags pair was reported to support rapid and reversible subcellular recruitment and organelle-contact manipulation without requiring concatemerization or low-temperature preincubation.

Source:

Here we overcome these limitations by engineering an optimized Magnets pair requiring neither concatemerization nor low temperature preincubation.

Source:

Here, we compared and quantified the extent of light-dependent dimer occurrence in small, subcellular volumes controlled by three such tools: Cry2/CIB1, iLID, and Magnets.

Source:

developed several variants, including those with substantially faster kinetics than any of the other conventional dimerization-based blue spectrum photoswitches

Source:

we completed a multi-directional engineering of the fungal photoreceptor Vivid to develop pairs of distinct photoswitches named Magnets

Ranked Citations

  1. 1.
    StructuralSource 1Nature Communications2015Claim 71Claim 72Claim 73

    Extracted from this source document.

  2. 2.
    StructuralSource 2Proceedings of the National Academy of Sciences2018Claim 43Claim 44Claim 45

    Extracted from this source document.

  3. 3.

    Extracted from this source document.