Toolkit/optogenetic protein kinase A

optogenetic protein kinase A

Multi-Component Switch·Research·Since 2019

Taxonomy: Mechanism Branch / Architecture. Workflows sit above the mechanism and technique branches rather than replacing them.

Summary

Optogenetic protein kinase A is a light-controlled multi-component switch for probing localized protein kinase A signaling. It uses the Cry2-Cib photodimerizing pair to translocate a low-constitutive-activity protein kinase A catalytic subunit to a Cib-defined subcellular site, where kinase activity is restored.

Usefulness & Problems

Why this is useful

This tool is useful for investigating localized functions of protein kinase A with optical control over subcellular recruitment. The available evidence indicates that it was developed specifically to study spatial aspects of kinase signaling rather than bulk pathway activation alone.

Source:

Upon activation with light, large increases in cellular cAMP levels are observed resulting in down-stream signaling events.

Source:

To this end, I have developed two optogenetic proteins for investigating the localized functions of 1) protein kinase A and 2) its second messenger cAMP.

Problem solved

It addresses the problem of controlling protein kinase A activity at defined subcellular regions to dissect localized signaling functions. The cited work frames this as part of cellular optogenetics for spatiotemporal control of kinase signaling.

Source:

To this end, I have developed two optogenetic proteins for investigating the localized functions of 1) protein kinase A and 2) its second messenger cAMP.

Taxonomy & Function

Primary hierarchy

Mechanism Branch

Architecture: A composed arrangement of multiple parts that instantiates one or more mechanisms.

Techniques

No technique tags yet.

Target processes

signaling

Input: Light

Implementation Constraints

Implementation requires a multi-component construct architecture based on Cry2 and Cib, with Cib localized to a chosen subcellular region and a low-constitutive-activity protein kinase A catalytic subunit fused for light-dependent recruitment. The evidence supports subcellular targeting and domain fusion logic, but does not specify expression system, linker design, cofactors, or illumination parameters.

The supplied evidence is limited to a design/mechanism description and does not report kinetics, dynamic range, reversibility, wavelength details, or validation across cell types. Independent replication is not evident from the provided sources.

Validation

Cell-freeBacteriaMammalianMouseHumanTherapeuticIndep. Replication

Supporting Sources

Ranked Claims

Claim 1engineering designsupports2019Source 1needs review

A photoactivated adenylate cyclase was engineered for expression at specific subcellular locations to investigate localized cAMP signaling.

In order to investigate localized cAMP signaling, a photoactivated adenylate cyclase was engineered to be expressed at specific subcellular locations.
Claim 2engineering designsupports2019Source 1needs review

A photoactivated adenylate cyclase was engineered for expression at specific subcellular locations to investigate localized cAMP signaling.

In order to investigate localized cAMP signaling, a photoactivated adenylate cyclase was engineered to be expressed at specific subcellular locations.
Claim 3engineering designsupports2019Source 1needs review

A photoactivated adenylate cyclase was engineered for expression at specific subcellular locations to investigate localized cAMP signaling.

In order to investigate localized cAMP signaling, a photoactivated adenylate cyclase was engineered to be expressed at specific subcellular locations.
Claim 4engineering designsupports2019Source 1needs review

A photoactivated adenylate cyclase was engineered for expression at specific subcellular locations to investigate localized cAMP signaling.

In order to investigate localized cAMP signaling, a photoactivated adenylate cyclase was engineered to be expressed at specific subcellular locations.
Claim 5engineering designsupports2019Source 1needs review

A photoactivated adenylate cyclase was engineered for expression at specific subcellular locations to investigate localized cAMP signaling.

In order to investigate localized cAMP signaling, a photoactivated adenylate cyclase was engineered to be expressed at specific subcellular locations.
Claim 6engineering designsupports2019Source 1needs review

A photoactivated adenylate cyclase was engineered for expression at specific subcellular locations to investigate localized cAMP signaling.

In order to investigate localized cAMP signaling, a photoactivated adenylate cyclase was engineered to be expressed at specific subcellular locations.
Claim 7engineering designsupports2019Source 1needs review

A photoactivated adenylate cyclase was engineered for expression at specific subcellular locations to investigate localized cAMP signaling.

In order to investigate localized cAMP signaling, a photoactivated adenylate cyclase was engineered to be expressed at specific subcellular locations.
Claim 8functional effectsupports2019Source 1needs review

Light activation of the photoactivated adenylate cyclase produces large increases in cellular cAMP levels and downstream signaling events.

Upon activation with light, large increases in cellular cAMP levels are observed resulting in down-stream signaling events.
Claim 9functional effectsupports2019Source 1needs review

Light activation of the photoactivated adenylate cyclase produces large increases in cellular cAMP levels and downstream signaling events.

Upon activation with light, large increases in cellular cAMP levels are observed resulting in down-stream signaling events.
Claim 10functional effectsupports2019Source 1needs review

Light activation of the photoactivated adenylate cyclase produces large increases in cellular cAMP levels and downstream signaling events.

Upon activation with light, large increases in cellular cAMP levels are observed resulting in down-stream signaling events.
Claim 11functional effectsupports2019Source 1needs review

Light activation of the photoactivated adenylate cyclase produces large increases in cellular cAMP levels and downstream signaling events.

Upon activation with light, large increases in cellular cAMP levels are observed resulting in down-stream signaling events.
Claim 12functional effectsupports2019Source 1needs review

Light activation of the photoactivated adenylate cyclase produces large increases in cellular cAMP levels and downstream signaling events.

Upon activation with light, large increases in cellular cAMP levels are observed resulting in down-stream signaling events.
Claim 13functional effectsupports2019Source 1needs review

Light activation of the photoactivated adenylate cyclase produces large increases in cellular cAMP levels and downstream signaling events.

Upon activation with light, large increases in cellular cAMP levels are observed resulting in down-stream signaling events.
Claim 14functional effectsupports2019Source 1needs review

Light activation of the photoactivated adenylate cyclase produces large increases in cellular cAMP levels and downstream signaling events.

Upon activation with light, large increases in cellular cAMP levels are observed resulting in down-stream signaling events.
Claim 15mechanismsupports2019Source 1needs review

The optogenetic protein kinase A uses the Cry2-Cib photodimerizing pair so that light stimulation translocates a low-constitutive-activity protein kinase A catalytic subunit to the subcellular region where Cib is localized and restores activity.

The optogenetic protein kinase A takes advantage of the Cry2-Cib photodimerizing pair. In short, a protein kinase A catalytic subunit with low constitutive activity was fused to Cry2 such that, upon stimulation with light, it translocates to whatever subcellular region Cib is localized to and activity is restored.
Claim 16mechanismsupports2019Source 1needs review

The optogenetic protein kinase A uses the Cry2-Cib photodimerizing pair so that light stimulation translocates a low-constitutive-activity protein kinase A catalytic subunit to the subcellular region where Cib is localized and restores activity.

The optogenetic protein kinase A takes advantage of the Cry2-Cib photodimerizing pair. In short, a protein kinase A catalytic subunit with low constitutive activity was fused to Cry2 such that, upon stimulation with light, it translocates to whatever subcellular region Cib is localized to and activity is restored.
Claim 17mechanismsupports2019Source 1needs review

The optogenetic protein kinase A uses the Cry2-Cib photodimerizing pair so that light stimulation translocates a low-constitutive-activity protein kinase A catalytic subunit to the subcellular region where Cib is localized and restores activity.

The optogenetic protein kinase A takes advantage of the Cry2-Cib photodimerizing pair. In short, a protein kinase A catalytic subunit with low constitutive activity was fused to Cry2 such that, upon stimulation with light, it translocates to whatever subcellular region Cib is localized to and activity is restored.
Claim 18mechanismsupports2019Source 1needs review

The optogenetic protein kinase A uses the Cry2-Cib photodimerizing pair so that light stimulation translocates a low-constitutive-activity protein kinase A catalytic subunit to the subcellular region where Cib is localized and restores activity.

The optogenetic protein kinase A takes advantage of the Cry2-Cib photodimerizing pair. In short, a protein kinase A catalytic subunit with low constitutive activity was fused to Cry2 such that, upon stimulation with light, it translocates to whatever subcellular region Cib is localized to and activity is restored.
Claim 19mechanismsupports2019Source 1needs review

The optogenetic protein kinase A uses the Cry2-Cib photodimerizing pair so that light stimulation translocates a low-constitutive-activity protein kinase A catalytic subunit to the subcellular region where Cib is localized and restores activity.

The optogenetic protein kinase A takes advantage of the Cry2-Cib photodimerizing pair. In short, a protein kinase A catalytic subunit with low constitutive activity was fused to Cry2 such that, upon stimulation with light, it translocates to whatever subcellular region Cib is localized to and activity is restored.
Claim 20mechanismsupports2019Source 1needs review

The optogenetic protein kinase A uses the Cry2-Cib photodimerizing pair so that light stimulation translocates a low-constitutive-activity protein kinase A catalytic subunit to the subcellular region where Cib is localized and restores activity.

The optogenetic protein kinase A takes advantage of the Cry2-Cib photodimerizing pair. In short, a protein kinase A catalytic subunit with low constitutive activity was fused to Cry2 such that, upon stimulation with light, it translocates to whatever subcellular region Cib is localized to and activity is restored.
Claim 21mechanismsupports2019Source 1needs review

The optogenetic protein kinase A uses the Cry2-Cib photodimerizing pair so that light stimulation translocates a low-constitutive-activity protein kinase A catalytic subunit to the subcellular region where Cib is localized and restores activity.

The optogenetic protein kinase A takes advantage of the Cry2-Cib photodimerizing pair. In short, a protein kinase A catalytic subunit with low constitutive activity was fused to Cry2 such that, upon stimulation with light, it translocates to whatever subcellular region Cib is localized to and activity is restored.
Claim 22tool developmentsupports2019Source 1needs review

The thesis reports development of two optogenetic proteins to investigate localized functions of protein kinase A and cAMP.

To this end, I have developed two optogenetic proteins for investigating the localized functions of 1) protein kinase A and 2) its second messenger cAMP.
Claim 23tool developmentsupports2019Source 1needs review

The thesis reports development of two optogenetic proteins to investigate localized functions of protein kinase A and cAMP.

To this end, I have developed two optogenetic proteins for investigating the localized functions of 1) protein kinase A and 2) its second messenger cAMP.
Claim 24tool developmentsupports2019Source 1needs review

The thesis reports development of two optogenetic proteins to investigate localized functions of protein kinase A and cAMP.

To this end, I have developed two optogenetic proteins for investigating the localized functions of 1) protein kinase A and 2) its second messenger cAMP.
Claim 25tool developmentsupports2019Source 1needs review

The thesis reports development of two optogenetic proteins to investigate localized functions of protein kinase A and cAMP.

To this end, I have developed two optogenetic proteins for investigating the localized functions of 1) protein kinase A and 2) its second messenger cAMP.
Claim 26tool developmentsupports2019Source 1needs review

The thesis reports development of two optogenetic proteins to investigate localized functions of protein kinase A and cAMP.

To this end, I have developed two optogenetic proteins for investigating the localized functions of 1) protein kinase A and 2) its second messenger cAMP.
Claim 27tool developmentsupports2019Source 1needs review

The thesis reports development of two optogenetic proteins to investigate localized functions of protein kinase A and cAMP.

To this end, I have developed two optogenetic proteins for investigating the localized functions of 1) protein kinase A and 2) its second messenger cAMP.
Claim 28tool developmentsupports2019Source 1needs review

The thesis reports development of two optogenetic proteins to investigate localized functions of protein kinase A and cAMP.

To this end, I have developed two optogenetic proteins for investigating the localized functions of 1) protein kinase A and 2) its second messenger cAMP.

Approval Evidence

1 source2 linked approval claimsfirst-pass slug optogenetic-protein-kinase-a
I have developed two optogenetic proteins for investigating the localized functions of 1) protein kinase A and 2) its second messenger cAMP.

Source:

mechanismsupports

The optogenetic protein kinase A uses the Cry2-Cib photodimerizing pair so that light stimulation translocates a low-constitutive-activity protein kinase A catalytic subunit to the subcellular region where Cib is localized and restores activity.

The optogenetic protein kinase A takes advantage of the Cry2-Cib photodimerizing pair. In short, a protein kinase A catalytic subunit with low constitutive activity was fused to Cry2 such that, upon stimulation with light, it translocates to whatever subcellular region Cib is localized to and activity is restored.

Source:

tool developmentsupports

The thesis reports development of two optogenetic proteins to investigate localized functions of protein kinase A and cAMP.

To this end, I have developed two optogenetic proteins for investigating the localized functions of 1) protein kinase A and 2) its second messenger cAMP.

Source:

Comparisons

Source-backed strengths

The design provides light-triggered subcellular translocation through the Cry2-Cib photodimerizing system and couples localization to restoration of protein kinase A activity. The evidence directly supports spatially defined activation logic, but does not provide quantitative performance metrics in the supplied material.

Source:

In order to investigate localized cAMP signaling, a photoactivated adenylate cyclase was engineered to be expressed at specific subcellular locations.

Ranked Citations

  1. 1.
    StructuralSource 1Carolina Digital Repository (University of North Carolina at Chapel Hill)2019Claim 1Claim 2Claim 3

    Extracted from this source document.