Toolkit/protein engineering approaches for opto-protein development

protein engineering approaches for opto-protein development

Engineering Method·Research·Since 2022

Taxonomy: Technique Branch / Method. Workflows sit above the mechanism and technique branches rather than replacing them.

Summary

Protein engineering approaches for opto-protein development are review-described strategies for creating and optimizing non-neuronal light-regulatable proteins. The approaches specifically include modifying photosensitive domains and fusing them to effector domains to generate light-controllable functions.

Usefulness & Problems

Why this is useful

These approaches are useful for developing novel optogenetic proteins whose activity can be regulated by light. The cited review presents them as protein engineering and synthetic biology strategies that may aid opto-protein development and optimization.

Problem solved

This methodology addresses the challenge of engineering proteins with light-controllable functions in non-neuronal biological contexts. The evidence supports that it does so by leveraging photosensitive domains and coupling them to effector domains.

Problem links

Need precise spatiotemporal control with light input

Derived

Protein engineering approaches for opto-protein development comprise a review-defined methodology for creating and optimizing non-neuronal light-regulatable proteins. The described strategies include modification of photosensitive domains and fusion of these domains to effector domains to generate light-controllable functions.

Taxonomy & Function

Primary hierarchy

Technique Branch

Method: A concrete method used to build, optimize, or evolve an engineered system.

Techniques

No technique tags yet.

Target processes

No target processes tagged yet.

Input: Light

Implementation Constraints

cofactor dependency: cofactor requirement unknownencoding mode: genetically encodedimplementation constraint: context specific validationimplementation constraint: spectral hardware requirementoperating role: builder

The available evidence indicates construct-level design centered on photosensitive domains and their fusion to effector domains. No specific cofactors, host organisms, expression systems, linker designs, or delivery methods are provided in the supplied evidence.

The supplied evidence is review-level and does not provide specific proteins, photoreceptors, wavelengths, quantitative performance, or experimental validation outcomes. Independent replication, comparative benchmarking, and implementation constraints are not described in the provided material.

Validation

Cell-freeBacteriaMammalianMouseHumanTherapeuticIndep. Replication

Supporting Sources

Ranked Claims

Claim 1design strategysupports2022Source 1needs review

Modification of photosensitive domains and their fusion to effector domains are discussed as general strategies for creating light-controllable functions.

general strategies for creating light-controllable functions, modification of the photosensitive domains and their fusion to effector domains
Claim 2design strategysupports2022Source 1needs review

Modification of photosensitive domains and their fusion to effector domains are discussed as general strategies for creating light-controllable functions.

general strategies for creating light-controllable functions, modification of the photosensitive domains and their fusion to effector domains
Claim 3design strategysupports2022Source 1needs review

Modification of photosensitive domains and their fusion to effector domains are discussed as general strategies for creating light-controllable functions.

general strategies for creating light-controllable functions, modification of the photosensitive domains and their fusion to effector domains
Claim 4design strategysupports2022Source 1needs review

Modification of photosensitive domains and their fusion to effector domains are discussed as general strategies for creating light-controllable functions.

general strategies for creating light-controllable functions, modification of the photosensitive domains and their fusion to effector domains
Claim 5design strategysupports2022Source 1needs review

Modification of photosensitive domains and their fusion to effector domains are discussed as general strategies for creating light-controllable functions.

general strategies for creating light-controllable functions, modification of the photosensitive domains and their fusion to effector domains
Claim 6design strategysupports2022Source 1needs review

Modification of photosensitive domains and their fusion to effector domains are discussed as general strategies for creating light-controllable functions.

general strategies for creating light-controllable functions, modification of the photosensitive domains and their fusion to effector domains
Claim 7design strategysupports2022Source 1needs review

Modification of photosensitive domains and their fusion to effector domains are discussed as general strategies for creating light-controllable functions.

general strategies for creating light-controllable functions, modification of the photosensitive domains and their fusion to effector domains
Claim 8design strategysupports2022Source 1needs review

Modification of photosensitive domains and their fusion to effector domains are discussed as general strategies for creating light-controllable functions.

general strategies for creating light-controllable functions, modification of the photosensitive domains and their fusion to effector domains
Claim 9design strategysupports2022Source 1needs review

Modification of photosensitive domains and their fusion to effector domains are discussed as general strategies for creating light-controllable functions.

general strategies for creating light-controllable functions, modification of the photosensitive domains and their fusion to effector domains
Claim 10design strategysupports2022Source 1needs review

Modification of photosensitive domains and their fusion to effector domains are discussed as general strategies for creating light-controllable functions.

general strategies for creating light-controllable functions, modification of the photosensitive domains and their fusion to effector domains
Claim 11design strategysupports2022Source 1needs review

Modification of photosensitive domains and their fusion to effector domains are discussed as general strategies for creating light-controllable functions.

general strategies for creating light-controllable functions, modification of the photosensitive domains and their fusion to effector domains
Claim 12design strategysupports2022Source 1needs review

Modification of photosensitive domains and their fusion to effector domains are discussed as general strategies for creating light-controllable functions.

general strategies for creating light-controllable functions, modification of the photosensitive domains and their fusion to effector domains
Claim 13design strategysupports2022Source 1needs review

Modification of photosensitive domains and their fusion to effector domains are discussed as general strategies for creating light-controllable functions.

general strategies for creating light-controllable functions, modification of the photosensitive domains and their fusion to effector domains
Claim 14design strategysupports2022Source 1needs review

Modification of photosensitive domains and their fusion to effector domains are discussed as general strategies for creating light-controllable functions.

general strategies for creating light-controllable functions, modification of the photosensitive domains and their fusion to effector domains
Claim 15design strategysupports2022Source 1needs review

Modification of photosensitive domains and their fusion to effector domains are discussed as general strategies for creating light-controllable functions.

general strategies for creating light-controllable functions, modification of the photosensitive domains and their fusion to effector domains
Claim 16design strategysupports2022Source 1needs review

Modification of photosensitive domains and their fusion to effector domains are discussed as general strategies for creating light-controllable functions.

general strategies for creating light-controllable functions, modification of the photosensitive domains and their fusion to effector domains
Claim 17design strategysupports2022Source 1needs review

Modification of photosensitive domains and their fusion to effector domains are discussed as general strategies for creating light-controllable functions.

general strategies for creating light-controllable functions, modification of the photosensitive domains and their fusion to effector domains
Claim 18design strategysupports2022Source 1needs review

Modification of photosensitive domains and their fusion to effector domains are discussed as general strategies for creating light-controllable functions.

general strategies for creating light-controllable functions, modification of the photosensitive domains and their fusion to effector domains
Claim 19design strategysupports2022Source 1needs review

Modification of photosensitive domains and their fusion to effector domains are discussed as general strategies for creating light-controllable functions.

general strategies for creating light-controllable functions, modification of the photosensitive domains and their fusion to effector domains
Claim 20design strategysupports2022Source 1needs review

Modification of photosensitive domains and their fusion to effector domains are discussed as general strategies for creating light-controllable functions.

general strategies for creating light-controllable functions, modification of the photosensitive domains and their fusion to effector domains
Claim 21review scopesupports2022Source 1needs review

The review focuses on engineering and optimization of non-neuronal light-regulatable proteins using protein engineering and synthetic biology approaches.

This review highlights different protein engineering and synthetic biology approaches, which might aid in the development and optimization of novel optogenetic proteins (Opto-proteins). Focusing on non-neuronal optogenetics
Claim 22review scopesupports2022Source 1needs review

The review focuses on engineering and optimization of non-neuronal light-regulatable proteins using protein engineering and synthetic biology approaches.

This review highlights different protein engineering and synthetic biology approaches, which might aid in the development and optimization of novel optogenetic proteins (Opto-proteins). Focusing on non-neuronal optogenetics
Claim 23review scopesupports2022Source 1needs review

The review focuses on engineering and optimization of non-neuronal light-regulatable proteins using protein engineering and synthetic biology approaches.

This review highlights different protein engineering and synthetic biology approaches, which might aid in the development and optimization of novel optogenetic proteins (Opto-proteins). Focusing on non-neuronal optogenetics
Claim 24review scopesupports2022Source 1needs review

The review focuses on engineering and optimization of non-neuronal light-regulatable proteins using protein engineering and synthetic biology approaches.

This review highlights different protein engineering and synthetic biology approaches, which might aid in the development and optimization of novel optogenetic proteins (Opto-proteins). Focusing on non-neuronal optogenetics
Claim 25review scopesupports2022Source 1needs review

The review focuses on engineering and optimization of non-neuronal light-regulatable proteins using protein engineering and synthetic biology approaches.

This review highlights different protein engineering and synthetic biology approaches, which might aid in the development and optimization of novel optogenetic proteins (Opto-proteins). Focusing on non-neuronal optogenetics
Claim 26review scopesupports2022Source 1needs review

The review focuses on engineering and optimization of non-neuronal light-regulatable proteins using protein engineering and synthetic biology approaches.

This review highlights different protein engineering and synthetic biology approaches, which might aid in the development and optimization of novel optogenetic proteins (Opto-proteins). Focusing on non-neuronal optogenetics
Claim 27review scopesupports2022Source 1needs review

The review focuses on engineering and optimization of non-neuronal light-regulatable proteins using protein engineering and synthetic biology approaches.

This review highlights different protein engineering and synthetic biology approaches, which might aid in the development and optimization of novel optogenetic proteins (Opto-proteins). Focusing on non-neuronal optogenetics
Claim 28review scopesupports2022Source 1needs review

The review focuses on engineering and optimization of non-neuronal light-regulatable proteins using protein engineering and synthetic biology approaches.

This review highlights different protein engineering and synthetic biology approaches, which might aid in the development and optimization of novel optogenetic proteins (Opto-proteins). Focusing on non-neuronal optogenetics
Claim 29review scopesupports2022Source 1needs review

The review focuses on engineering and optimization of non-neuronal light-regulatable proteins using protein engineering and synthetic biology approaches.

This review highlights different protein engineering and synthetic biology approaches, which might aid in the development and optimization of novel optogenetic proteins (Opto-proteins). Focusing on non-neuronal optogenetics
Claim 30review scopesupports2022Source 1needs review

The review focuses on engineering and optimization of non-neuronal light-regulatable proteins using protein engineering and synthetic biology approaches.

This review highlights different protein engineering and synthetic biology approaches, which might aid in the development and optimization of novel optogenetic proteins (Opto-proteins). Focusing on non-neuronal optogenetics
Claim 31review scopesupports2022Source 1needs review

The review focuses on engineering and optimization of non-neuronal light-regulatable proteins using protein engineering and synthetic biology approaches.

This review highlights different protein engineering and synthetic biology approaches, which might aid in the development and optimization of novel optogenetic proteins (Opto-proteins). Focusing on non-neuronal optogenetics
Claim 32review scopesupports2022Source 1needs review

The review focuses on engineering and optimization of non-neuronal light-regulatable proteins using protein engineering and synthetic biology approaches.

This review highlights different protein engineering and synthetic biology approaches, which might aid in the development and optimization of novel optogenetic proteins (Opto-proteins). Focusing on non-neuronal optogenetics
Claim 33review scopesupports2022Source 1needs review

The review focuses on engineering and optimization of non-neuronal light-regulatable proteins using protein engineering and synthetic biology approaches.

This review highlights different protein engineering and synthetic biology approaches, which might aid in the development and optimization of novel optogenetic proteins (Opto-proteins). Focusing on non-neuronal optogenetics
Claim 34review scopesupports2022Source 1needs review

The review focuses on engineering and optimization of non-neuronal light-regulatable proteins using protein engineering and synthetic biology approaches.

This review highlights different protein engineering and synthetic biology approaches, which might aid in the development and optimization of novel optogenetic proteins (Opto-proteins). Focusing on non-neuronal optogenetics
Claim 35review scopesupports2022Source 1needs review

The review focuses on engineering and optimization of non-neuronal light-regulatable proteins using protein engineering and synthetic biology approaches.

This review highlights different protein engineering and synthetic biology approaches, which might aid in the development and optimization of novel optogenetic proteins (Opto-proteins). Focusing on non-neuronal optogenetics
Claim 36review scopesupports2022Source 1needs review

The review focuses on engineering and optimization of non-neuronal light-regulatable proteins using protein engineering and synthetic biology approaches.

This review highlights different protein engineering and synthetic biology approaches, which might aid in the development and optimization of novel optogenetic proteins (Opto-proteins). Focusing on non-neuronal optogenetics
Claim 37review scopesupports2022Source 1needs review

The review focuses on engineering and optimization of non-neuronal light-regulatable proteins using protein engineering and synthetic biology approaches.

This review highlights different protein engineering and synthetic biology approaches, which might aid in the development and optimization of novel optogenetic proteins (Opto-proteins). Focusing on non-neuronal optogenetics
Claim 38review scopesupports2022Source 1needs review

The review focuses on engineering and optimization of non-neuronal light-regulatable proteins using protein engineering and synthetic biology approaches.

This review highlights different protein engineering and synthetic biology approaches, which might aid in the development and optimization of novel optogenetic proteins (Opto-proteins). Focusing on non-neuronal optogenetics
Claim 39review scopesupports2022Source 1needs review

The review focuses on engineering and optimization of non-neuronal light-regulatable proteins using protein engineering and synthetic biology approaches.

This review highlights different protein engineering and synthetic biology approaches, which might aid in the development and optimization of novel optogenetic proteins (Opto-proteins). Focusing on non-neuronal optogenetics
Claim 40review scopesupports2022Source 1needs review

The review focuses on engineering and optimization of non-neuronal light-regulatable proteins using protein engineering and synthetic biology approaches.

This review highlights different protein engineering and synthetic biology approaches, which might aid in the development and optimization of novel optogenetic proteins (Opto-proteins). Focusing on non-neuronal optogenetics
Claim 41review scopesupports2022Source 1needs review

The review focuses on engineering and optimization of non-neuronal light-regulatable proteins using protein engineering and synthetic biology approaches.

This review highlights different protein engineering and synthetic biology approaches, which might aid in the development and optimization of novel optogenetic proteins (Opto-proteins). Focusing on non-neuronal optogenetics
Claim 42review scopesupports2022Source 1needs review

The review focuses on engineering and optimization of non-neuronal light-regulatable proteins using protein engineering and synthetic biology approaches.

This review highlights different protein engineering and synthetic biology approaches, which might aid in the development and optimization of novel optogenetic proteins (Opto-proteins). Focusing on non-neuronal optogenetics
Claim 43review scopesupports2022Source 1needs review

The review focuses on engineering and optimization of non-neuronal light-regulatable proteins using protein engineering and synthetic biology approaches.

This review highlights different protein engineering and synthetic biology approaches, which might aid in the development and optimization of novel optogenetic proteins (Opto-proteins). Focusing on non-neuronal optogenetics
Claim 44review scopesupports2022Source 1needs review

The review focuses on engineering and optimization of non-neuronal light-regulatable proteins using protein engineering and synthetic biology approaches.

This review highlights different protein engineering and synthetic biology approaches, which might aid in the development and optimization of novel optogenetic proteins (Opto-proteins). Focusing on non-neuronal optogenetics
Claim 45review scopesupports2022Source 1needs review

The review focuses on engineering and optimization of non-neuronal light-regulatable proteins using protein engineering and synthetic biology approaches.

This review highlights different protein engineering and synthetic biology approaches, which might aid in the development and optimization of novel optogenetic proteins (Opto-proteins). Focusing on non-neuronal optogenetics
Claim 46review scopesupports2022Source 1needs review

The review focuses on engineering and optimization of non-neuronal light-regulatable proteins using protein engineering and synthetic biology approaches.

This review highlights different protein engineering and synthetic biology approaches, which might aid in the development and optimization of novel optogenetic proteins (Opto-proteins). Focusing on non-neuronal optogenetics
Claim 47review scopesupports2022Source 1needs review

The review focuses on engineering and optimization of non-neuronal light-regulatable proteins using protein engineering and synthetic biology approaches.

This review highlights different protein engineering and synthetic biology approaches, which might aid in the development and optimization of novel optogenetic proteins (Opto-proteins). Focusing on non-neuronal optogenetics

Approval Evidence

1 source1 linked approval claimfirst-pass slug protein-engineering-approaches-for-opto-protein-development
This review highlights different protein engineering and synthetic biology approaches, which might aid in the development and optimization of novel optogenetic proteins (Opto-proteins).

Source:

review scopesupports

The review focuses on engineering and optimization of non-neuronal light-regulatable proteins using protein engineering and synthetic biology approaches.

This review highlights different protein engineering and synthetic biology approaches, which might aid in the development and optimization of novel optogenetic proteins (Opto-proteins). Focusing on non-neuronal optogenetics

Source:

Comparisons

Source-backed strengths

A key strength is conceptual generality: the review identifies both photosensitive-domain modification and photosensitive-domain/effector-domain fusion as reusable design strategies. The evidence also supports applicability to both development and optimization of novel optogenetic proteins.

protein engineering approaches for opto-protein development and doxycycline-dependent photoactivated gene expression address a similar problem space.

Shared frame: same top-level item type; same primary input modality: light

protein engineering approaches for opto-protein development and oligomerization reactions address a similar problem space.

Shared frame: same top-level item type; same primary input modality: light

protein engineering approaches for opto-protein development and targeted mutagenesis of Arabidopsis phototropins address a similar problem space.

Shared frame: same top-level item type; same primary input modality: light

Ranked Citations

  1. 1.
    StructuralSource 1Frontiers in Bioengineering and Biotechnology2022Claim 20Claim 19Claim 19

    Seeded from load plan for claim cl1. Extracted from this source document.