Source 1primary paper2026MED
Toolkit/scMOVIR
scMOVIR
Taxonomy: Technique Branch / Method. Workflows sit above the mechanism and technique branches rather than replacing them.
Summary
Here, we present scMOVIR, a single-cell multi-omics database for human viral infections and immune responses.
Usefulness & Problems
No literature-backed usefulness or problem-fit explainer has been materialized for this record yet.
Published Workflows
Objective: Build a comprehensive single-cell multi-omics database for human viral infections and immune responses by integrating heterogeneous datasets into a consistent and interoperable resource.
Why it works: The paper states that consistency and interoperability are supported by standardized preprocessing, batch correction, unified cell-type annotation, and metadata harmonization using authoritative ontologies.
integration of transcriptomic, proteomic, and immune receptor repertoire profiles at single-cell resolutionstandardized preprocessingbatch correctionunified cell-type annotationontology-based metadata harmonizationdataset integrationstandardized preprocessingbatch correctioncell-type annotationmetadata harmonization
Stages
- 1.Dataset integration(library_build)
This stage creates the underlying integrated resource spanning multiple omics modalities and infection contexts.
Selection: Inclusion of transcriptomic, proteomic, and immune receptor repertoire profiles at single-cell resolution from human viral infection contexts.
- 2.Standardized preprocessing and harmonization(secondary_characterization)
This stage standardizes heterogeneous source datasets so they can be compared and explored within one resource.
Selection: Application of batch correction, unified cell-type annotation, and ontology-harmonized metadata to all datasets.
- 3.User-facing exploration and visualization(confirmatory_validation)
This stage makes the curated resource usable for investigating virus-host immune interactions and supporting antiviral research.
Selection: Expose integrated and harmonized data through user-friendly interfaces for exploration and interactive visualization.
Taxonomy & Function
Primary hierarchy
Technique Branch
Method: A concrete computational method used to design, rank, or analyze an engineered system.
Mechanisms
No mechanism tags yet.
Techniques
Computational DesignTarget processes
No target processes tagged yet.
Validation
Cell-freeBacteriaMammalianMouseHumanTherapeuticIndep. Replication
Supporting Sources
Ranked Claims
All datasets in scMOVIR undergo standardized preprocessing including batch correction and unified cell-type annotation, with metadata harmonized using authoritative ontologies.
The datasets in scMOVIR span 59 disease states and more than 30 tissue types.
disease states 59tissue types 30
scMOVIR provides user-friendly interfaces for dataset exploration and interactive visualization of cellular dynamics and molecular profiles.
scMOVIR is a single-cell multi-omics database for human viral infections and immune responses.
scMOVIR compiles 8532 human samples across 114 viral species, subtypes, and strains.
human samples 8532viral species/subtypes/strains 114
scMOVIR systematically integrates transcriptomic, proteomic, and immune receptor repertoire profiles at single-cell resolution.
Approval Evidence
1 source6 linked approval claimsfirst-pass slug scmovir
Here, we present scMOVIR, a single-cell multi-omics database for human viral infections and immune responses.
Source:
processing standardizationsupports
All datasets in scMOVIR undergo standardized preprocessing including batch correction and unified cell-type annotation, with metadata harmonized using authoritative ontologies.
Source:
resource coveragesupports
The datasets in scMOVIR span 59 disease states and more than 30 tissue types.
Source:
resource functionsupports
scMOVIR provides user-friendly interfaces for dataset exploration and interactive visualization of cellular dynamics and molecular profiles.
Source:
resource introductionsupports
scMOVIR is a single-cell multi-omics database for human viral infections and immune responses.
Source:
resource scalesupports
scMOVIR compiles 8532 human samples across 114 viral species, subtypes, and strains.
Source:
resource scopesupports
scMOVIR systematically integrates transcriptomic, proteomic, and immune receptor repertoire profiles at single-cell resolution.
Source:
Comparisons
No literature-backed comparison notes have been materialized for this record yet.
Ranked Citations
- 1.