Toolkit/SecYEG complex

SecYEG complex

Multi-Component Switch·Research·Since 2010

Taxonomy: Mechanism Branch / Architecture. Workflows sit above the mechanism and technique branches rather than replacing them.

Summary

The SecYEG complex was engineered as a light-responsive protein translocation switch by introducing an organochemical photoswitch into two transmembrane segments that form the lateral gate of the bacterial membrane-embedded protein-conducting pore. Illumination modulates pore gating and thereby controls SecYEG-dependent protein translocation.

Usefulness & Problems

Why this is useful

This tool enables optical control over a core membrane protein localization process, namely translocation through the bacterial SecYEG channel. It is useful for perturbing protein export with light rather than constitutive genetic alteration, based on direct control of pore gating.

Source:

Light‐Induced Control of Protein Translocation by the SecYEG Complex

Problem solved

It addresses the problem of how to externally and reversibly regulate protein translocation through the SecYEG translocon. The reported solution is to couple lateral-gate opening behavior to a light-responsive chemical modification.

Taxonomy & Function

Primary hierarchy

Mechanism Branch

Architecture: A composed arrangement of multiple parts that instantiates one or more mechanisms.

Techniques

No technique tags yet.

Target processes

localization

Input: Light

Implementation Constraints

Implementation requires site-specific introduction of an organochemical photoswitch into two transmembrane segments of the SecYEG lateral gate. The available evidence does not specify the photoswitch chemistry, construct design details, host system, or illumination parameters.

The supplied evidence does not report quantitative performance metrics, wavelength dependence, reversibility, dynamic range, or substrate scope. Independent replication and validation outside the cited study are not provided in the evidence.

Validation

Cell-freeBacteriaMammalianMouseHumanTherapeuticIndep. Replication

Observations

successBacteriamechanistic demo

Inferred from claim c2 during normalization. Visible and UV light reversibly switched azobenzene between trans and cis configurations, enforcing opening and closure of the protein-conducting pore. Derived from claim c2. Quoted text: Reversible switching of the azobenzene between the trans and cis configurations by irradiation with visible and UV light enforced the opening and closure of the protein-conducting pore

Source:

successBacteriamechanistic demo

Inferred from claim c2 during normalization. Visible and UV light reversibly switched azobenzene between trans and cis configurations, enforcing opening and closure of the protein-conducting pore. Derived from claim c2. Quoted text: Reversible switching of the azobenzene between the trans and cis configurations by irradiation with visible and UV light enforced the opening and closure of the protein-conducting pore

Source:

successBacteriamechanistic demo

Inferred from claim c2 during normalization. Visible and UV light reversibly switched azobenzene between trans and cis configurations, enforcing opening and closure of the protein-conducting pore. Derived from claim c2. Quoted text: Reversible switching of the azobenzene between the trans and cis configurations by irradiation with visible and UV light enforced the opening and closure of the protein-conducting pore

Source:

successBacteriamechanistic demo

Inferred from claim c2 during normalization. Visible and UV light reversibly switched azobenzene between trans and cis configurations, enforcing opening and closure of the protein-conducting pore. Derived from claim c2. Quoted text: Reversible switching of the azobenzene between the trans and cis configurations by irradiation with visible and UV light enforced the opening and closure of the protein-conducting pore

Source:

successBacteriamechanistic demo

Inferred from claim c2 during normalization. Visible and UV light reversibly switched azobenzene between trans and cis configurations, enforcing opening and closure of the protein-conducting pore. Derived from claim c2. Quoted text: Reversible switching of the azobenzene between the trans and cis configurations by irradiation with visible and UV light enforced the opening and closure of the protein-conducting pore

Source:

successBacteriamechanistic demo

Inferred from claim c2 during normalization. Visible and UV light reversibly switched azobenzene between trans and cis configurations, enforcing opening and closure of the protein-conducting pore. Derived from claim c2. Quoted text: Reversible switching of the azobenzene between the trans and cis configurations by irradiation with visible and UV light enforced the opening and closure of the protein-conducting pore

Source:

successBacteriamechanistic demo

Inferred from claim c2 during normalization. Visible and UV light reversibly switched azobenzene between trans and cis configurations, enforcing opening and closure of the protein-conducting pore. Derived from claim c2. Quoted text: Reversible switching of the azobenzene between the trans and cis configurations by irradiation with visible and UV light enforced the opening and closure of the protein-conducting pore

Source:

successBacteriamechanistic demo

Inferred from claim c2 during normalization. Visible and UV light reversibly switched azobenzene between trans and cis configurations, enforcing opening and closure of the protein-conducting pore. Derived from claim c2. Quoted text: Reversible switching of the azobenzene between the trans and cis configurations by irradiation with visible and UV light enforced the opening and closure of the protein-conducting pore

Source:

successBacteriamechanistic demo

Inferred from claim c2 during normalization. Visible and UV light reversibly switched azobenzene between trans and cis configurations, enforcing opening and closure of the protein-conducting pore. Derived from claim c2. Quoted text: Reversible switching of the azobenzene between the trans and cis configurations by irradiation with visible and UV light enforced the opening and closure of the protein-conducting pore

Source:

successBacteriamechanistic demo

Inferred from claim c2 during normalization. Visible and UV light reversibly switched azobenzene between trans and cis configurations, enforcing opening and closure of the protein-conducting pore. Derived from claim c2. Quoted text: Reversible switching of the azobenzene between the trans and cis configurations by irradiation with visible and UV light enforced the opening and closure of the protein-conducting pore

Source:

successBacteriamechanistic demo

Inferred from claim c2 during normalization. Visible and UV light reversibly switched azobenzene between trans and cis configurations, enforcing opening and closure of the protein-conducting pore. Derived from claim c2. Quoted text: Reversible switching of the azobenzene between the trans and cis configurations by irradiation with visible and UV light enforced the opening and closure of the protein-conducting pore

Source:

successBacteriamechanistic demo

Inferred from claim c2 during normalization. Visible and UV light reversibly switched azobenzene between trans and cis configurations, enforcing opening and closure of the protein-conducting pore. Derived from claim c2. Quoted text: Reversible switching of the azobenzene between the trans and cis configurations by irradiation with visible and UV light enforced the opening and closure of the protein-conducting pore

Source:

successBacteriamechanistic demo

Inferred from claim c2 during normalization. Visible and UV light reversibly switched azobenzene between trans and cis configurations, enforcing opening and closure of the protein-conducting pore. Derived from claim c2. Quoted text: Reversible switching of the azobenzene between the trans and cis configurations by irradiation with visible and UV light enforced the opening and closure of the protein-conducting pore

Source:

successBacteriamechanistic demo

Inferred from claim c2 during normalization. Visible and UV light reversibly switched azobenzene between trans and cis configurations, enforcing opening and closure of the protein-conducting pore. Derived from claim c2. Quoted text: Reversible switching of the azobenzene between the trans and cis configurations by irradiation with visible and UV light enforced the opening and closure of the protein-conducting pore

Source:

Supporting Sources

Ranked Claims

Claim 1engineering modificationsupports2010Source 1needs review

An organochemical photoswitch was introduced into two transmembrane segments that comprise the lateral gate of the bacterial membrane embedded protein-conducting pore.

An organochemical photoswitch was introduced into two transmembrane segments that comprise the lateral gate of the bacterial-membrane-embedded protein-conducting pore.
Claim 2engineering modificationsupports2010Source 1needs review

An organochemical photoswitch was introduced into two transmembrane segments that comprise the lateral gate of the bacterial membrane embedded protein-conducting pore.

An organochemical photoswitch was introduced into two transmembrane segments that comprise the lateral gate of the bacterial-membrane-embedded protein-conducting pore.
Claim 3engineering modificationsupports2010Source 1needs review

An organochemical photoswitch was introduced into two transmembrane segments that comprise the lateral gate of the bacterial membrane embedded protein-conducting pore.

An organochemical photoswitch was introduced into two transmembrane segments that comprise the lateral gate of the bacterial-membrane-embedded protein-conducting pore.
Claim 4engineering modificationsupports2010Source 1needs review

An organochemical photoswitch was introduced into two transmembrane segments that comprise the lateral gate of the bacterial membrane embedded protein-conducting pore.

An organochemical photoswitch was introduced into two transmembrane segments that comprise the lateral gate of the bacterial-membrane-embedded protein-conducting pore.
Claim 5engineering modificationsupports2010Source 1needs review

An organochemical photoswitch was introduced into two transmembrane segments that comprise the lateral gate of the bacterial membrane embedded protein-conducting pore.

An organochemical photoswitch was introduced into two transmembrane segments that comprise the lateral gate of the bacterial-membrane-embedded protein-conducting pore.
Claim 6engineering modificationsupports2010Source 1needs review

An organochemical photoswitch was introduced into two transmembrane segments that comprise the lateral gate of the bacterial membrane embedded protein-conducting pore.

An organochemical photoswitch was introduced into two transmembrane segments that comprise the lateral gate of the bacterial-membrane-embedded protein-conducting pore.
Claim 7engineering modificationsupports2010Source 1needs review

An organochemical photoswitch was introduced into two transmembrane segments that comprise the lateral gate of the bacterial membrane embedded protein-conducting pore.

An organochemical photoswitch was introduced into two transmembrane segments that comprise the lateral gate of the bacterial-membrane-embedded protein-conducting pore.
Claim 8engineering modificationsupports2010Source 1needs review

An organochemical photoswitch was introduced into two transmembrane segments that comprise the lateral gate of the bacterial membrane embedded protein-conducting pore.

An organochemical photoswitch was introduced into two transmembrane segments that comprise the lateral gate of the bacterial-membrane-embedded protein-conducting pore.
Claim 9engineering modificationsupports2010Source 1needs review

An organochemical photoswitch was introduced into two transmembrane segments that comprise the lateral gate of the bacterial membrane embedded protein-conducting pore.

An organochemical photoswitch was introduced into two transmembrane segments that comprise the lateral gate of the bacterial-membrane-embedded protein-conducting pore.
Claim 10engineering modificationsupports2010Source 1needs review

An organochemical photoswitch was introduced into two transmembrane segments that comprise the lateral gate of the bacterial membrane embedded protein-conducting pore.

An organochemical photoswitch was introduced into two transmembrane segments that comprise the lateral gate of the bacterial-membrane-embedded protein-conducting pore.
Claim 11engineering modificationsupports2010Source 1needs review

An organochemical photoswitch was introduced into two transmembrane segments that comprise the lateral gate of the bacterial membrane embedded protein-conducting pore.

An organochemical photoswitch was introduced into two transmembrane segments that comprise the lateral gate of the bacterial-membrane-embedded protein-conducting pore.
Claim 12engineering modificationsupports2010Source 1needs review

An organochemical photoswitch was introduced into two transmembrane segments that comprise the lateral gate of the bacterial membrane embedded protein-conducting pore.

An organochemical photoswitch was introduced into two transmembrane segments that comprise the lateral gate of the bacterial-membrane-embedded protein-conducting pore.
Claim 13engineering modificationsupports2010Source 1needs review

An organochemical photoswitch was introduced into two transmembrane segments that comprise the lateral gate of the bacterial membrane embedded protein-conducting pore.

An organochemical photoswitch was introduced into two transmembrane segments that comprise the lateral gate of the bacterial-membrane-embedded protein-conducting pore.
Claim 14engineering modificationsupports2010Source 1needs review

An organochemical photoswitch was introduced into two transmembrane segments that comprise the lateral gate of the bacterial membrane embedded protein-conducting pore.

An organochemical photoswitch was introduced into two transmembrane segments that comprise the lateral gate of the bacterial-membrane-embedded protein-conducting pore.
Claim 15functional controlsupports2010Source 1needs review

Protein translocation by the SecYEG complex can be controlled by light-induced gating of the pore.

Light‐Induced Control of Protein Translocation by the SecYEG Complex
Claim 16functional controlsupports2010Source 1needs review

Protein translocation by the SecYEG complex can be controlled by light-induced gating of the pore.

Light‐Induced Control of Protein Translocation by the SecYEG Complex
Claim 17functional controlsupports2010Source 1needs review

Protein translocation by the SecYEG complex can be controlled by light-induced gating of the pore.

Light‐Induced Control of Protein Translocation by the SecYEG Complex
Claim 18functional controlsupports2010Source 1needs review

Protein translocation by the SecYEG complex can be controlled by light-induced gating of the pore.

Light‐Induced Control of Protein Translocation by the SecYEG Complex
Claim 19functional controlsupports2010Source 1needs review

Protein translocation by the SecYEG complex can be controlled by light-induced gating of the pore.

Light‐Induced Control of Protein Translocation by the SecYEG Complex
Claim 20functional controlsupports2010Source 1needs review

Protein translocation by the SecYEG complex can be controlled by light-induced gating of the pore.

Light‐Induced Control of Protein Translocation by the SecYEG Complex
Claim 21functional controlsupports2010Source 1needs review

Protein translocation by the SecYEG complex can be controlled by light-induced gating of the pore.

Light‐Induced Control of Protein Translocation by the SecYEG Complex
Claim 22functional controlsupports2010Source 1needs review

Protein translocation by the SecYEG complex can be controlled by light-induced gating of the pore.

Light‐Induced Control of Protein Translocation by the SecYEG Complex
Claim 23functional controlsupports2010Source 1needs review

Protein translocation by the SecYEG complex can be controlled by light-induced gating of the pore.

Light‐Induced Control of Protein Translocation by the SecYEG Complex
Claim 24functional controlsupports2010Source 1needs review

Protein translocation by the SecYEG complex can be controlled by light-induced gating of the pore.

Light‐Induced Control of Protein Translocation by the SecYEG Complex
Claim 25functional controlsupports2010Source 1needs review

Protein translocation by the SecYEG complex can be controlled by light-induced gating of the pore.

Light‐Induced Control of Protein Translocation by the SecYEG Complex
Claim 26functional controlsupports2010Source 1needs review

Protein translocation by the SecYEG complex can be controlled by light-induced gating of the pore.

Light‐Induced Control of Protein Translocation by the SecYEG Complex
Claim 27functional controlsupports2010Source 1needs review

Protein translocation by the SecYEG complex can be controlled by light-induced gating of the pore.

Light‐Induced Control of Protein Translocation by the SecYEG Complex
Claim 28functional controlsupports2010Source 1needs review

Protein translocation by the SecYEG complex can be controlled by light-induced gating of the pore.

Light‐Induced Control of Protein Translocation by the SecYEG Complex
Claim 29light control mechanismsupports2010Source 1needs review

Visible and UV light reversibly switched azobenzene between trans and cis configurations, enforcing opening and closure of the protein-conducting pore.

Reversible switching of the azobenzene between the trans and cis configurations by irradiation with visible and UV light enforced the opening and closure of the protein-conducting pore
Claim 30light control mechanismsupports2010Source 1needs review

Visible and UV light reversibly switched azobenzene between trans and cis configurations, enforcing opening and closure of the protein-conducting pore.

Reversible switching of the azobenzene between the trans and cis configurations by irradiation with visible and UV light enforced the opening and closure of the protein-conducting pore
Claim 31light control mechanismsupports2010Source 1needs review

Visible and UV light reversibly switched azobenzene between trans and cis configurations, enforcing opening and closure of the protein-conducting pore.

Reversible switching of the azobenzene between the trans and cis configurations by irradiation with visible and UV light enforced the opening and closure of the protein-conducting pore
Claim 32light control mechanismsupports2010Source 1needs review

Visible and UV light reversibly switched azobenzene between trans and cis configurations, enforcing opening and closure of the protein-conducting pore.

Reversible switching of the azobenzene between the trans and cis configurations by irradiation with visible and UV light enforced the opening and closure of the protein-conducting pore
Claim 33light control mechanismsupports2010Source 1needs review

Visible and UV light reversibly switched azobenzene between trans and cis configurations, enforcing opening and closure of the protein-conducting pore.

Reversible switching of the azobenzene between the trans and cis configurations by irradiation with visible and UV light enforced the opening and closure of the protein-conducting pore
Claim 34light control mechanismsupports2010Source 1needs review

Visible and UV light reversibly switched azobenzene between trans and cis configurations, enforcing opening and closure of the protein-conducting pore.

Reversible switching of the azobenzene between the trans and cis configurations by irradiation with visible and UV light enforced the opening and closure of the protein-conducting pore
Claim 35light control mechanismsupports2010Source 1needs review

Visible and UV light reversibly switched azobenzene between trans and cis configurations, enforcing opening and closure of the protein-conducting pore.

Reversible switching of the azobenzene between the trans and cis configurations by irradiation with visible and UV light enforced the opening and closure of the protein-conducting pore
Claim 36light control mechanismsupports2010Source 1needs review

Visible and UV light reversibly switched azobenzene between trans and cis configurations, enforcing opening and closure of the protein-conducting pore.

Reversible switching of the azobenzene between the trans and cis configurations by irradiation with visible and UV light enforced the opening and closure of the protein-conducting pore
Claim 37light control mechanismsupports2010Source 1needs review

Visible and UV light reversibly switched azobenzene between trans and cis configurations, enforcing opening and closure of the protein-conducting pore.

Reversible switching of the azobenzene between the trans and cis configurations by irradiation with visible and UV light enforced the opening and closure of the protein-conducting pore
Claim 38light control mechanismsupports2010Source 1needs review

Visible and UV light reversibly switched azobenzene between trans and cis configurations, enforcing opening and closure of the protein-conducting pore.

Reversible switching of the azobenzene between the trans and cis configurations by irradiation with visible and UV light enforced the opening and closure of the protein-conducting pore
Claim 39light control mechanismsupports2010Source 1needs review

Visible and UV light reversibly switched azobenzene between trans and cis configurations, enforcing opening and closure of the protein-conducting pore.

Reversible switching of the azobenzene between the trans and cis configurations by irradiation with visible and UV light enforced the opening and closure of the protein-conducting pore
Claim 40light control mechanismsupports2010Source 1needs review

Visible and UV light reversibly switched azobenzene between trans and cis configurations, enforcing opening and closure of the protein-conducting pore.

Reversible switching of the azobenzene between the trans and cis configurations by irradiation with visible and UV light enforced the opening and closure of the protein-conducting pore
Claim 41light control mechanismsupports2010Source 1needs review

Visible and UV light reversibly switched azobenzene between trans and cis configurations, enforcing opening and closure of the protein-conducting pore.

Reversible switching of the azobenzene between the trans and cis configurations by irradiation with visible and UV light enforced the opening and closure of the protein-conducting pore
Claim 42light control mechanismsupports2010Source 1needs review

Visible and UV light reversibly switched azobenzene between trans and cis configurations, enforcing opening and closure of the protein-conducting pore.

Reversible switching of the azobenzene between the trans and cis configurations by irradiation with visible and UV light enforced the opening and closure of the protein-conducting pore

Approval Evidence

1 source3 linked approval claimsfirst-pass slug secyeg-complex
Light‐Induced Control of Protein Translocation by the SecYEG Complex

Source:

engineering modificationsupports

An organochemical photoswitch was introduced into two transmembrane segments that comprise the lateral gate of the bacterial membrane embedded protein-conducting pore.

An organochemical photoswitch was introduced into two transmembrane segments that comprise the lateral gate of the bacterial-membrane-embedded protein-conducting pore.

Source:

functional controlsupports

Protein translocation by the SecYEG complex can be controlled by light-induced gating of the pore.

Light‐Induced Control of Protein Translocation by the SecYEG Complex

Source:

light control mechanismsupports

Visible and UV light reversibly switched azobenzene between trans and cis configurations, enforcing opening and closure of the protein-conducting pore.

Reversible switching of the azobenzene between the trans and cis configurations by irradiation with visible and UV light enforced the opening and closure of the protein-conducting pore

Source:

Comparisons

Source-backed strengths

The engineering strategy acts directly on the SecYEG pore by modifying two transmembrane segments that comprise the lateral gate. Source evidence supports functional light control of protein translocation through light-induced gating of the channel.

Source:

An organochemical photoswitch was introduced into two transmembrane segments that comprise the lateral gate of the bacterial-membrane-embedded protein-conducting pore.

Ranked Citations

  1. 1.
    StructuralSource 1Angewandte Chemie International Edition2010Claim 1Claim 2Claim 3

    Extracted from this source document.