Toolkit/small-angle X-ray scattering

small-angle X-ray scattering

Assay Method·Research·Since 2002

Also known as: SAXS

Taxonomy: Technique Branch / Method. Workflows sit above the mechanism and technique branches rather than replacing them.

Summary

Small-angle X-ray scattering (SAXS) is a structural characterization assay used to directly observe solution-state conformational changes in light-responsive proteins. In the cited phototropin literature, SAXS was used with other biophysical approaches to study multidomain phototropins from Chlamydomonas and Arabidopsis.

Usefulness & Problems

Why this is useful

SAXS is useful for probing global protein architecture and conformational change in solution when high-resolution structural information is difficult to obtain. In the cited context, it supported investigation of blue-light-responsive phototropins, which are light-activated kinases relevant to plant signaling and optogenetic tool inspiration.

Source:

The phototropins (phots) are light-activated kinases that are critical for plant physiology and the many diverse optogenetic tools that they have inspired.

Problem solved

This assay helps address the difficulty of obtaining structural information on multidomain phototropins under solution conditions. It provides direct observation of light-associated conformational changes where high-resolution structures remain challenging.

Problem links

Need conditional control of signaling activity

Derived

Small-angle X-ray scattering (SAXS) is a structural characterization assay used to directly observe solution-state conformational changes in light-responsive proteins. In the cited phototropin literature, SAXS supported models of multidomain phototropins from Chlamydomonas and Arabidopsis with an extended linear domain arrangement and LOV2-kinase N-lobe contact.

Need precise spatiotemporal control with light input

Derived

Small-angle X-ray scattering (SAXS) is a structural characterization assay used to directly observe solution-state conformational changes in light-responsive proteins. In the cited phototropin literature, SAXS supported models of multidomain phototropins from Chlamydomonas and Arabidopsis with an extended linear domain arrangement and LOV2-kinase N-lobe contact.

Taxonomy & Function

Primary hierarchy

Technique Branch

Method: A concrete measurement method used to characterize an engineered system.

Target processes

signaling

Input: Light

Implementation Constraints

cofactor dependency: cofactor requirement unknownencoding mode: genetically encodedimplementation constraint: context specific validationimplementation constraint: spectral hardware requirementoperating role: sensorswitch architecture: uncaging

The available evidence supports use of SAXS as a solution-state biophysical assay applied to multidomain phototropins from Chlamydomonas and Arabidopsis. No specific beamline setup, sample preparation requirements, illumination protocol, or construct design details are provided in the supplied evidence.

The evidence does not provide quantitative performance metrics, resolution limits, or detailed experimental conditions for the SAXS measurements. The cited review also states that high-resolution structural information on phototropins remains challenging to obtain, indicating that SAXS does not by itself resolve that gap.

Validation

Cell-freeBacteriaMammalianMouseHumanTherapeuticIndep. Replication

Supporting Sources

Ranked Claims

Claim 1domain architecturesupports2021Source 2needs review

Phototropins contain two blue-light-sensing LOV domains, LOV1 and LOV2, together with a C-terminal serine/threonine kinase domain.

Phototropins combine two blue-light-sensing Light-Oxygen-Voltage (LOV) domains (LOV1 and LOV2) and a C-terminal serine/threonine kinase domain, using the LOV domains to control the catalytic activity of the kinase.
Claim 2domain architecturesupports2021Source 2needs review

Phototropins contain two blue-light-sensing LOV domains, LOV1 and LOV2, together with a C-terminal serine/threonine kinase domain.

Phototropins combine two blue-light-sensing Light-Oxygen-Voltage (LOV) domains (LOV1 and LOV2) and a C-terminal serine/threonine kinase domain, using the LOV domains to control the catalytic activity of the kinase.
Claim 3domain architecturesupports2021Source 2needs review

Phototropins contain two blue-light-sensing LOV domains, LOV1 and LOV2, together with a C-terminal serine/threonine kinase domain.

Phototropins combine two blue-light-sensing Light-Oxygen-Voltage (LOV) domains (LOV1 and LOV2) and a C-terminal serine/threonine kinase domain, using the LOV domains to control the catalytic activity of the kinase.
Claim 4domain architecturesupports2021Source 2needs review

Phototropins contain two blue-light-sensing LOV domains, LOV1 and LOV2, together with a C-terminal serine/threonine kinase domain.

Phototropins combine two blue-light-sensing Light-Oxygen-Voltage (LOV) domains (LOV1 and LOV2) and a C-terminal serine/threonine kinase domain, using the LOV domains to control the catalytic activity of the kinase.
Claim 5domain architecturesupports2021Source 2needs review

Phototropins contain two blue-light-sensing LOV domains, LOV1 and LOV2, together with a C-terminal serine/threonine kinase domain.

Phototropins combine two blue-light-sensing Light-Oxygen-Voltage (LOV) domains (LOV1 and LOV2) and a C-terminal serine/threonine kinase domain, using the LOV domains to control the catalytic activity of the kinase.
Claim 6domain architecturesupports2021Source 2needs review

Phototropins contain two blue-light-sensing LOV domains, LOV1 and LOV2, together with a C-terminal serine/threonine kinase domain.

Phototropins combine two blue-light-sensing Light-Oxygen-Voltage (LOV) domains (LOV1 and LOV2) and a C-terminal serine/threonine kinase domain, using the LOV domains to control the catalytic activity of the kinase.
Claim 7domain architecturesupports2021Source 2needs review

Phototropins contain two blue-light-sensing LOV domains, LOV1 and LOV2, together with a C-terminal serine/threonine kinase domain.

Phototropins combine two blue-light-sensing Light-Oxygen-Voltage (LOV) domains (LOV1 and LOV2) and a C-terminal serine/threonine kinase domain, using the LOV domains to control the catalytic activity of the kinase.
Claim 8domain architecturesupports2021Source 2needs review

Phototropins contain two blue-light-sensing LOV domains, LOV1 and LOV2, together with a C-terminal serine/threonine kinase domain.

Phototropins combine two blue-light-sensing Light-Oxygen-Voltage (LOV) domains (LOV1 and LOV2) and a C-terminal serine/threonine kinase domain, using the LOV domains to control the catalytic activity of the kinase.
Claim 9domain architecturesupports2021Source 2needs review

Phototropins contain two blue-light-sensing LOV domains, LOV1 and LOV2, together with a C-terminal serine/threonine kinase domain.

Phototropins combine two blue-light-sensing Light-Oxygen-Voltage (LOV) domains (LOV1 and LOV2) and a C-terminal serine/threonine kinase domain, using the LOV domains to control the catalytic activity of the kinase.
Claim 10domain architecturesupports2021Source 2needs review

Phototropins contain two blue-light-sensing LOV domains, LOV1 and LOV2, together with a C-terminal serine/threonine kinase domain.

Phototropins combine two blue-light-sensing Light-Oxygen-Voltage (LOV) domains (LOV1 and LOV2) and a C-terminal serine/threonine kinase domain, using the LOV domains to control the catalytic activity of the kinase.
Claim 11functional rolesupports2021Source 2needs review

Phototropins are light-activated kinases important for plant physiology and have inspired diverse optogenetic tools.

The phototropins (phots) are light-activated kinases that are critical for plant physiology and the many diverse optogenetic tools that they have inspired.
Claim 12functional rolesupports2021Source 2needs review

Phototropins are light-activated kinases important for plant physiology and have inspired diverse optogenetic tools.

The phototropins (phots) are light-activated kinases that are critical for plant physiology and the many diverse optogenetic tools that they have inspired.
Claim 13functional rolesupports2021Source 2needs review

Phototropins are light-activated kinases important for plant physiology and have inspired diverse optogenetic tools.

The phototropins (phots) are light-activated kinases that are critical for plant physiology and the many diverse optogenetic tools that they have inspired.
Claim 14functional rolesupports2021Source 2needs review

Phototropins are light-activated kinases important for plant physiology and have inspired diverse optogenetic tools.

The phototropins (phots) are light-activated kinases that are critical for plant physiology and the many diverse optogenetic tools that they have inspired.
Claim 15functional rolesupports2021Source 2needs review

Phototropins are light-activated kinases important for plant physiology and have inspired diverse optogenetic tools.

The phototropins (phots) are light-activated kinases that are critical for plant physiology and the many diverse optogenetic tools that they have inspired.
Claim 16functional rolesupports2021Source 2needs review

Phototropins are light-activated kinases important for plant physiology and have inspired diverse optogenetic tools.

The phototropins (phots) are light-activated kinases that are critical for plant physiology and the many diverse optogenetic tools that they have inspired.
Claim 17functional rolesupports2021Source 2needs review

Phototropins are light-activated kinases important for plant physiology and have inspired diverse optogenetic tools.

The phototropins (phots) are light-activated kinases that are critical for plant physiology and the many diverse optogenetic tools that they have inspired.
Claim 18functional rolesupports2021Source 2needs review

Phototropins are light-activated kinases important for plant physiology and have inspired diverse optogenetic tools.

The phototropins (phots) are light-activated kinases that are critical for plant physiology and the many diverse optogenetic tools that they have inspired.
Claim 19functional rolesupports2021Source 2needs review

Phototropins are light-activated kinases important for plant physiology and have inspired diverse optogenetic tools.

The phototropins (phots) are light-activated kinases that are critical for plant physiology and the many diverse optogenetic tools that they have inspired.
Claim 20functional rolesupports2021Source 2needs review

Phototropins are light-activated kinases important for plant physiology and have inspired diverse optogenetic tools.

The phototropins (phots) are light-activated kinases that are critical for plant physiology and the many diverse optogenetic tools that they have inspired.
Claim 21knowledge gapsupports2021Source 2needs review

High-resolution structural information on phototropins remains challenging to obtain and is presented as important for both fundamental understanding and engineering efforts.

the challenges that will have to be overcome to obtain high-resolution structural information on these exciting photoreceptors. Such information will be essential to advancing fundamental understanding of plant physiology while enabling engineering efforts at both the whole plant and molecular levels.
Claim 22knowledge gapsupports2021Source 2needs review

High-resolution structural information on phototropins remains challenging to obtain and is presented as important for both fundamental understanding and engineering efforts.

the challenges that will have to be overcome to obtain high-resolution structural information on these exciting photoreceptors. Such information will be essential to advancing fundamental understanding of plant physiology while enabling engineering efforts at both the whole plant and molecular levels.
Claim 23knowledge gapsupports2021Source 2needs review

High-resolution structural information on phototropins remains challenging to obtain and is presented as important for both fundamental understanding and engineering efforts.

the challenges that will have to be overcome to obtain high-resolution structural information on these exciting photoreceptors. Such information will be essential to advancing fundamental understanding of plant physiology while enabling engineering efforts at both the whole plant and molecular levels.
Claim 24knowledge gapsupports2021Source 2needs review

High-resolution structural information on phototropins remains challenging to obtain and is presented as important for both fundamental understanding and engineering efforts.

the challenges that will have to be overcome to obtain high-resolution structural information on these exciting photoreceptors. Such information will be essential to advancing fundamental understanding of plant physiology while enabling engineering efforts at both the whole plant and molecular levels.
Claim 25knowledge gapsupports2021Source 2needs review

High-resolution structural information on phototropins remains challenging to obtain and is presented as important for both fundamental understanding and engineering efforts.

the challenges that will have to be overcome to obtain high-resolution structural information on these exciting photoreceptors. Such information will be essential to advancing fundamental understanding of plant physiology while enabling engineering efforts at both the whole plant and molecular levels.
Claim 26knowledge gapsupports2021Source 2needs review

High-resolution structural information on phototropins remains challenging to obtain and is presented as important for both fundamental understanding and engineering efforts.

the challenges that will have to be overcome to obtain high-resolution structural information on these exciting photoreceptors. Such information will be essential to advancing fundamental understanding of plant physiology while enabling engineering efforts at both the whole plant and molecular levels.
Claim 27knowledge gapsupports2021Source 2needs review

High-resolution structural information on phototropins remains challenging to obtain and is presented as important for both fundamental understanding and engineering efforts.

the challenges that will have to be overcome to obtain high-resolution structural information on these exciting photoreceptors. Such information will be essential to advancing fundamental understanding of plant physiology while enabling engineering efforts at both the whole plant and molecular levels.
Claim 28knowledge gapsupports2021Source 2needs review

High-resolution structural information on phototropins remains challenging to obtain and is presented as important for both fundamental understanding and engineering efforts.

the challenges that will have to be overcome to obtain high-resolution structural information on these exciting photoreceptors. Such information will be essential to advancing fundamental understanding of plant physiology while enabling engineering efforts at both the whole plant and molecular levels.
Claim 29knowledge gapsupports2021Source 2needs review

High-resolution structural information on phototropins remains challenging to obtain and is presented as important for both fundamental understanding and engineering efforts.

the challenges that will have to be overcome to obtain high-resolution structural information on these exciting photoreceptors. Such information will be essential to advancing fundamental understanding of plant physiology while enabling engineering efforts at both the whole plant and molecular levels.
Claim 30knowledge gapsupports2021Source 2needs review

High-resolution structural information on phototropins remains challenging to obtain and is presented as important for both fundamental understanding and engineering efforts.

the challenges that will have to be overcome to obtain high-resolution structural information on these exciting photoreceptors. Such information will be essential to advancing fundamental understanding of plant physiology while enabling engineering efforts at both the whole plant and molecular levels.
Claim 31mechanism summarysupports2021Source 2needs review

Activation of the LOV2 domain triggers unfolding of alpha helices that communicate the light signal to the kinase domain.

activation of the LOV2 domain triggers the unfolding of alpha helices that communicate the light signal to the kinase domain
Claim 32mechanism summarysupports2021Source 2needs review

Activation of the LOV2 domain triggers unfolding of alpha helices that communicate the light signal to the kinase domain.

activation of the LOV2 domain triggers the unfolding of alpha helices that communicate the light signal to the kinase domain
Claim 33mechanism summarysupports2021Source 2needs review

Activation of the LOV2 domain triggers unfolding of alpha helices that communicate the light signal to the kinase domain.

activation of the LOV2 domain triggers the unfolding of alpha helices that communicate the light signal to the kinase domain
Claim 34mechanism summarysupports2021Source 2needs review

Activation of the LOV2 domain triggers unfolding of alpha helices that communicate the light signal to the kinase domain.

activation of the LOV2 domain triggers the unfolding of alpha helices that communicate the light signal to the kinase domain
Claim 35mechanism summarysupports2021Source 2needs review

Activation of the LOV2 domain triggers unfolding of alpha helices that communicate the light signal to the kinase domain.

activation of the LOV2 domain triggers the unfolding of alpha helices that communicate the light signal to the kinase domain
Claim 36mechanism summarysupports2021Source 2needs review

Activation of the LOV2 domain triggers unfolding of alpha helices that communicate the light signal to the kinase domain.

activation of the LOV2 domain triggers the unfolding of alpha helices that communicate the light signal to the kinase domain
Claim 37mechanism summarysupports2021Source 2needs review

Activation of the LOV2 domain triggers unfolding of alpha helices that communicate the light signal to the kinase domain.

activation of the LOV2 domain triggers the unfolding of alpha helices that communicate the light signal to the kinase domain
Claim 38mechanism summarysupports2021Source 2needs review

Activation of the LOV2 domain triggers unfolding of alpha helices that communicate the light signal to the kinase domain.

activation of the LOV2 domain triggers the unfolding of alpha helices that communicate the light signal to the kinase domain
Claim 39mechanism summarysupports2021Source 2needs review

Activation of the LOV2 domain triggers unfolding of alpha helices that communicate the light signal to the kinase domain.

activation of the LOV2 domain triggers the unfolding of alpha helices that communicate the light signal to the kinase domain
Claim 40mechanism summarysupports2021Source 2needs review

Activation of the LOV2 domain triggers unfolding of alpha helices that communicate the light signal to the kinase domain.

activation of the LOV2 domain triggers the unfolding of alpha helices that communicate the light signal to the kinase domain
Claim 41structural modelsupports2021Source 2needs review

Recent SAXS and other biophysical studies of multidomain phototropins from Chlamydomonas and Arabidopsis support models with an extended linear domain arrangement in which the regulatory LOV2 domain contacts the kinase domain N-lobe.

Recent studies have made progress addressing these questions by utilizing small-angle X-ray scattering (SAXS) and other biophysical approaches to study multidomain phots from Chlamydomonas and Arabidopsis, leading to models where the domains have an extended linear arrangement, with the regulatory LOV2 domain contacting the kinase domain N-lobe.
Claim 42structural modelsupports2021Source 2needs review

Recent SAXS and other biophysical studies of multidomain phototropins from Chlamydomonas and Arabidopsis support models with an extended linear domain arrangement in which the regulatory LOV2 domain contacts the kinase domain N-lobe.

Recent studies have made progress addressing these questions by utilizing small-angle X-ray scattering (SAXS) and other biophysical approaches to study multidomain phots from Chlamydomonas and Arabidopsis, leading to models where the domains have an extended linear arrangement, with the regulatory LOV2 domain contacting the kinase domain N-lobe.
Claim 43structural modelsupports2021Source 2needs review

Recent SAXS and other biophysical studies of multidomain phototropins from Chlamydomonas and Arabidopsis support models with an extended linear domain arrangement in which the regulatory LOV2 domain contacts the kinase domain N-lobe.

Recent studies have made progress addressing these questions by utilizing small-angle X-ray scattering (SAXS) and other biophysical approaches to study multidomain phots from Chlamydomonas and Arabidopsis, leading to models where the domains have an extended linear arrangement, with the regulatory LOV2 domain contacting the kinase domain N-lobe.
Claim 44structural modelsupports2021Source 2needs review

Recent SAXS and other biophysical studies of multidomain phototropins from Chlamydomonas and Arabidopsis support models with an extended linear domain arrangement in which the regulatory LOV2 domain contacts the kinase domain N-lobe.

Recent studies have made progress addressing these questions by utilizing small-angle X-ray scattering (SAXS) and other biophysical approaches to study multidomain phots from Chlamydomonas and Arabidopsis, leading to models where the domains have an extended linear arrangement, with the regulatory LOV2 domain contacting the kinase domain N-lobe.
Claim 45structural modelsupports2021Source 2needs review

Recent SAXS and other biophysical studies of multidomain phototropins from Chlamydomonas and Arabidopsis support models with an extended linear domain arrangement in which the regulatory LOV2 domain contacts the kinase domain N-lobe.

Recent studies have made progress addressing these questions by utilizing small-angle X-ray scattering (SAXS) and other biophysical approaches to study multidomain phots from Chlamydomonas and Arabidopsis, leading to models where the domains have an extended linear arrangement, with the regulatory LOV2 domain contacting the kinase domain N-lobe.
Claim 46structural modelsupports2021Source 2needs review

Recent SAXS and other biophysical studies of multidomain phototropins from Chlamydomonas and Arabidopsis support models with an extended linear domain arrangement in which the regulatory LOV2 domain contacts the kinase domain N-lobe.

Recent studies have made progress addressing these questions by utilizing small-angle X-ray scattering (SAXS) and other biophysical approaches to study multidomain phots from Chlamydomonas and Arabidopsis, leading to models where the domains have an extended linear arrangement, with the regulatory LOV2 domain contacting the kinase domain N-lobe.
Claim 47structural modelsupports2021Source 2needs review

Recent SAXS and other biophysical studies of multidomain phototropins from Chlamydomonas and Arabidopsis support models with an extended linear domain arrangement in which the regulatory LOV2 domain contacts the kinase domain N-lobe.

Recent studies have made progress addressing these questions by utilizing small-angle X-ray scattering (SAXS) and other biophysical approaches to study multidomain phots from Chlamydomonas and Arabidopsis, leading to models where the domains have an extended linear arrangement, with the regulatory LOV2 domain contacting the kinase domain N-lobe.
Claim 48structural modelsupports2021Source 2needs review

Recent SAXS and other biophysical studies of multidomain phototropins from Chlamydomonas and Arabidopsis support models with an extended linear domain arrangement in which the regulatory LOV2 domain contacts the kinase domain N-lobe.

Recent studies have made progress addressing these questions by utilizing small-angle X-ray scattering (SAXS) and other biophysical approaches to study multidomain phots from Chlamydomonas and Arabidopsis, leading to models where the domains have an extended linear arrangement, with the regulatory LOV2 domain contacting the kinase domain N-lobe.
Claim 49structural modelsupports2021Source 2needs review

Recent SAXS and other biophysical studies of multidomain phototropins from Chlamydomonas and Arabidopsis support models with an extended linear domain arrangement in which the regulatory LOV2 domain contacts the kinase domain N-lobe.

Recent studies have made progress addressing these questions by utilizing small-angle X-ray scattering (SAXS) and other biophysical approaches to study multidomain phots from Chlamydomonas and Arabidopsis, leading to models where the domains have an extended linear arrangement, with the regulatory LOV2 domain contacting the kinase domain N-lobe.
Claim 50structural modelsupports2021Source 2needs review

Recent SAXS and other biophysical studies of multidomain phototropins from Chlamydomonas and Arabidopsis support models with an extended linear domain arrangement in which the regulatory LOV2 domain contacts the kinase domain N-lobe.

Recent studies have made progress addressing these questions by utilizing small-angle X-ray scattering (SAXS) and other biophysical approaches to study multidomain phots from Chlamydomonas and Arabidopsis, leading to models where the domains have an extended linear arrangement, with the regulatory LOV2 domain contacting the kinase domain N-lobe.
Claim 51structural modelsupports2021Source 2needs review

Recent SAXS and other biophysical studies of multidomain phototropins from Chlamydomonas and Arabidopsis support models with an extended linear domain arrangement in which the regulatory LOV2 domain contacts the kinase domain N-lobe.

Recent studies have made progress addressing these questions by utilizing small-angle X-ray scattering (SAXS) and other biophysical approaches to study multidomain phots from Chlamydomonas and Arabidopsis, leading to models where the domains have an extended linear arrangement, with the regulatory LOV2 domain contacting the kinase domain N-lobe.
Claim 52structural modelsupports2021Source 2needs review

Recent SAXS and other biophysical studies of multidomain phototropins from Chlamydomonas and Arabidopsis support models with an extended linear domain arrangement in which the regulatory LOV2 domain contacts the kinase domain N-lobe.

Recent studies have made progress addressing these questions by utilizing small-angle X-ray scattering (SAXS) and other biophysical approaches to study multidomain phots from Chlamydomonas and Arabidopsis, leading to models where the domains have an extended linear arrangement, with the regulatory LOV2 domain contacting the kinase domain N-lobe.
Claim 53structural modelsupports2021Source 2needs review

Recent SAXS and other biophysical studies of multidomain phototropins from Chlamydomonas and Arabidopsis support models with an extended linear domain arrangement in which the regulatory LOV2 domain contacts the kinase domain N-lobe.

Recent studies have made progress addressing these questions by utilizing small-angle X-ray scattering (SAXS) and other biophysical approaches to study multidomain phots from Chlamydomonas and Arabidopsis, leading to models where the domains have an extended linear arrangement, with the regulatory LOV2 domain contacting the kinase domain N-lobe.
Claim 54structural modelsupports2021Source 2needs review

Recent SAXS and other biophysical studies of multidomain phototropins from Chlamydomonas and Arabidopsis support models with an extended linear domain arrangement in which the regulatory LOV2 domain contacts the kinase domain N-lobe.

Recent studies have made progress addressing these questions by utilizing small-angle X-ray scattering (SAXS) and other biophysical approaches to study multidomain phots from Chlamydomonas and Arabidopsis, leading to models where the domains have an extended linear arrangement, with the regulatory LOV2 domain contacting the kinase domain N-lobe.
Claim 55structural modelsupports2021Source 2needs review

Recent SAXS and other biophysical studies of multidomain phototropins from Chlamydomonas and Arabidopsis support models with an extended linear domain arrangement in which the regulatory LOV2 domain contacts the kinase domain N-lobe.

Recent studies have made progress addressing these questions by utilizing small-angle X-ray scattering (SAXS) and other biophysical approaches to study multidomain phots from Chlamydomonas and Arabidopsis, leading to models where the domains have an extended linear arrangement, with the regulatory LOV2 domain contacting the kinase domain N-lobe.
Claim 56structural modelsupports2021Source 2needs review

Recent SAXS and other biophysical studies of multidomain phototropins from Chlamydomonas and Arabidopsis support models with an extended linear domain arrangement in which the regulatory LOV2 domain contacts the kinase domain N-lobe.

Recent studies have made progress addressing these questions by utilizing small-angle X-ray scattering (SAXS) and other biophysical approaches to study multidomain phots from Chlamydomonas and Arabidopsis, leading to models where the domains have an extended linear arrangement, with the regulatory LOV2 domain contacting the kinase domain N-lobe.
Claim 57structural modelsupports2021Source 2needs review

Recent SAXS and other biophysical studies of multidomain phototropins from Chlamydomonas and Arabidopsis support models with an extended linear domain arrangement in which the regulatory LOV2 domain contacts the kinase domain N-lobe.

Recent studies have made progress addressing these questions by utilizing small-angle X-ray scattering (SAXS) and other biophysical approaches to study multidomain phots from Chlamydomonas and Arabidopsis, leading to models where the domains have an extended linear arrangement, with the regulatory LOV2 domain contacting the kinase domain N-lobe.
Claim 58structural modelsupports2021Source 2needs review

Recent SAXS and other biophysical studies of multidomain phototropins from Chlamydomonas and Arabidopsis support models with an extended linear domain arrangement in which the regulatory LOV2 domain contacts the kinase domain N-lobe.

Recent studies have made progress addressing these questions by utilizing small-angle X-ray scattering (SAXS) and other biophysical approaches to study multidomain phots from Chlamydomonas and Arabidopsis, leading to models where the domains have an extended linear arrangement, with the regulatory LOV2 domain contacting the kinase domain N-lobe.
Claim 59structural modelsupports2021Source 2needs review

Recent SAXS and other biophysical studies of multidomain phototropins from Chlamydomonas and Arabidopsis support models with an extended linear domain arrangement in which the regulatory LOV2 domain contacts the kinase domain N-lobe.

Recent studies have made progress addressing these questions by utilizing small-angle X-ray scattering (SAXS) and other biophysical approaches to study multidomain phots from Chlamydomonas and Arabidopsis, leading to models where the domains have an extended linear arrangement, with the regulatory LOV2 domain contacting the kinase domain N-lobe.
Claim 60structural modelsupports2021Source 2needs review

Recent SAXS and other biophysical studies of multidomain phototropins from Chlamydomonas and Arabidopsis support models with an extended linear domain arrangement in which the regulatory LOV2 domain contacts the kinase domain N-lobe.

Recent studies have made progress addressing these questions by utilizing small-angle X-ray scattering (SAXS) and other biophysical approaches to study multidomain phots from Chlamydomonas and Arabidopsis, leading to models where the domains have an extended linear arrangement, with the regulatory LOV2 domain contacting the kinase domain N-lobe.
Claim 61structural modelsupports2021Source 2needs review

Recent SAXS and other biophysical studies of multidomain phototropins from Chlamydomonas and Arabidopsis support models with an extended linear domain arrangement in which the regulatory LOV2 domain contacts the kinase domain N-lobe.

Recent studies have made progress addressing these questions by utilizing small-angle X-ray scattering (SAXS) and other biophysical approaches to study multidomain phots from Chlamydomonas and Arabidopsis, leading to models where the domains have an extended linear arrangement, with the regulatory LOV2 domain contacting the kinase domain N-lobe.
Claim 62structural modelsupports2021Source 2needs review

Recent SAXS and other biophysical studies of multidomain phototropins from Chlamydomonas and Arabidopsis support models with an extended linear domain arrangement in which the regulatory LOV2 domain contacts the kinase domain N-lobe.

Recent studies have made progress addressing these questions by utilizing small-angle X-ray scattering (SAXS) and other biophysical approaches to study multidomain phots from Chlamydomonas and Arabidopsis, leading to models where the domains have an extended linear arrangement, with the regulatory LOV2 domain contacting the kinase domain N-lobe.
Claim 63structural modelsupports2021Source 2needs review

Recent SAXS and other biophysical studies of multidomain phototropins from Chlamydomonas and Arabidopsis support models with an extended linear domain arrangement in which the regulatory LOV2 domain contacts the kinase domain N-lobe.

Recent studies have made progress addressing these questions by utilizing small-angle X-ray scattering (SAXS) and other biophysical approaches to study multidomain phots from Chlamydomonas and Arabidopsis, leading to models where the domains have an extended linear arrangement, with the regulatory LOV2 domain contacting the kinase domain N-lobe.
Claim 64structural modelsupports2021Source 2needs review

Recent SAXS and other biophysical studies of multidomain phototropins from Chlamydomonas and Arabidopsis support models with an extended linear domain arrangement in which the regulatory LOV2 domain contacts the kinase domain N-lobe.

Recent studies have made progress addressing these questions by utilizing small-angle X-ray scattering (SAXS) and other biophysical approaches to study multidomain phots from Chlamydomonas and Arabidopsis, leading to models where the domains have an extended linear arrangement, with the regulatory LOV2 domain contacting the kinase domain N-lobe.
Claim 65structural modelsupports2021Source 2needs review

Recent SAXS and other biophysical studies of multidomain phototropins from Chlamydomonas and Arabidopsis support models with an extended linear domain arrangement in which the regulatory LOV2 domain contacts the kinase domain N-lobe.

Recent studies have made progress addressing these questions by utilizing small-angle X-ray scattering (SAXS) and other biophysical approaches to study multidomain phots from Chlamydomonas and Arabidopsis, leading to models where the domains have an extended linear arrangement, with the regulatory LOV2 domain contacting the kinase domain N-lobe.
Claim 66structural modelsupports2021Source 2needs review

Recent SAXS and other biophysical studies of multidomain phototropins from Chlamydomonas and Arabidopsis support models with an extended linear domain arrangement in which the regulatory LOV2 domain contacts the kinase domain N-lobe.

Recent studies have made progress addressing these questions by utilizing small-angle X-ray scattering (SAXS) and other biophysical approaches to study multidomain phots from Chlamydomonas and Arabidopsis, leading to models where the domains have an extended linear arrangement, with the regulatory LOV2 domain contacting the kinase domain N-lobe.
Claim 67structural modelsupports2021Source 2needs review

Recent SAXS and other biophysical studies of multidomain phototropins from Chlamydomonas and Arabidopsis support models with an extended linear domain arrangement in which the regulatory LOV2 domain contacts the kinase domain N-lobe.

Recent studies have made progress addressing these questions by utilizing small-angle X-ray scattering (SAXS) and other biophysical approaches to study multidomain phots from Chlamydomonas and Arabidopsis, leading to models where the domains have an extended linear arrangement, with the regulatory LOV2 domain contacting the kinase domain N-lobe.
Claim 68structural change observationsupports2002Source 1needs review

Light-induced global conformational change of photoactive yellow protein was directly observed by small-angle X-ray scattering.

Claim 69structural change observationsupports2002Source 1needs review

Light-induced global conformational change of photoactive yellow protein was directly observed by small-angle X-ray scattering.

Claim 70structural change observationsupports2002Source 1needs review

Light-induced global conformational change of photoactive yellow protein was directly observed by small-angle X-ray scattering.

Claim 71structural change observationsupports2002Source 1needs review

Light-induced global conformational change of photoactive yellow protein was directly observed by small-angle X-ray scattering.

Claim 72structural change observationsupports2002Source 1needs review

Light-induced global conformational change of photoactive yellow protein was directly observed by small-angle X-ray scattering.

Claim 73structural change observationsupports2002Source 1needs review

Light-induced global conformational change of photoactive yellow protein was directly observed by small-angle X-ray scattering.

Claim 74structural change observationsupports2002Source 1needs review

Light-induced global conformational change of photoactive yellow protein was directly observed by small-angle X-ray scattering.

Claim 75structural change observationsupports2002Source 1needs review

Light-induced global conformational change of photoactive yellow protein was directly observed by small-angle X-ray scattering.

Claim 76structural change observationsupports2002Source 1needs review

Light-induced global conformational change of photoactive yellow protein was directly observed by small-angle X-ray scattering.

Claim 77structural change observationsupports2002Source 1needs review

Light-induced global conformational change of photoactive yellow protein was directly observed by small-angle X-ray scattering.

Claim 78structural change observationsupports2002Source 1needs review

Light-induced global conformational change of photoactive yellow protein was directly observed by small-angle X-ray scattering.

Claim 79structural change observationsupports2002Source 1needs review

Light-induced global conformational change of photoactive yellow protein was directly observed by small-angle X-ray scattering.

Claim 80structural change observationsupports2002Source 1needs review

Light-induced global conformational change of photoactive yellow protein was directly observed by small-angle X-ray scattering.

Claim 81structural change observationsupports2002Source 1needs review

Light-induced global conformational change of photoactive yellow protein was directly observed by small-angle X-ray scattering.

Claim 82structural change observationsupports2002Source 1needs review

Light-induced global conformational change of photoactive yellow protein was directly observed by small-angle X-ray scattering.

Claim 83structural change observationsupports2002Source 1needs review

Light-induced global conformational change of photoactive yellow protein was directly observed by small-angle X-ray scattering.

Claim 84structural change observationsupports2002Source 1needs review

Light-induced global conformational change of photoactive yellow protein was directly observed by small-angle X-ray scattering.

Approval Evidence

2 sources2 linked approval claimsfirst-pass slug small-angle-x-ray-scattering
Recent studies have made progress addressing these questions by utilizing small-angle X-ray scattering (SAXS) and other biophysical approaches to study multidomain phots from Chlamydomonas and Arabidopsis.

Source:

directly observed by small-angle X-ray scattering (SAXS)

Source:

structural modelsupports

Recent SAXS and other biophysical studies of multidomain phototropins from Chlamydomonas and Arabidopsis support models with an extended linear domain arrangement in which the regulatory LOV2 domain contacts the kinase domain N-lobe.

Recent studies have made progress addressing these questions by utilizing small-angle X-ray scattering (SAXS) and other biophysical approaches to study multidomain phots from Chlamydomonas and Arabidopsis, leading to models where the domains have an extended linear arrangement, with the regulatory LOV2 domain contacting the kinase domain N-lobe.

Source:

structural change observationsupports

Light-induced global conformational change of photoactive yellow protein was directly observed by small-angle X-ray scattering.

Source:

Comparisons

Source-backed strengths

The supplied evidence states that conformational changes were directly observed by SAXS. It is also presented as part of recent progress in studying multidomain phototropins from Chlamydomonas and Arabidopsis.

small-angle X-ray scattering and Avena sativa phototropin LOV2 domain address a similar problem space because they share signaling.

Shared frame: shared target processes: signaling; shared mechanisms: conformational uncaging, conformational_uncaging; same primary input modality: light

small-angle X-ray scattering and caging/uncaging events address a similar problem space because they share signaling.

Shared frame: shared target processes: signaling; shared mechanisms: conformational uncaging, conformational_uncaging; same primary input modality: light

Strengths here: looks easier to implement in practice.

small-angle X-ray scattering and engineered focal adhesion kinase two-input gate address a similar problem space because they share signaling.

Shared frame: shared target processes: signaling; shared mechanisms: conformational uncaging, conformational_uncaging; same primary input modality: light

Strengths here: looks easier to implement in practice.

Ranked Citations

  1. 1.
    StructuralSource 1Biochemistry2002Claim 83Claim 69Claim 84

    Seeded from load plan for claim c1.

  2. 2.
    StructuralSource 2Journal of Biological Chemistry2021Claim 10Claim 10Claim 10

    Seeded from load plan for claim cl4. Extracted from this source document.