Toolkit/synthetic promoters containing CREB1-specific cAMP response elements

synthetic promoters containing CREB1-specific cAMP response elements

Construct Pattern·Research·Since 2012

Taxonomy: Mechanism Branch / Architecture. Workflows sit above the mechanism and technique branches rather than replacing them.

Summary

Synthetic promoters containing CREB1-specific cAMP response elements are engineered transcriptional control sequences used in a designer signaling circuit. In the cited system, they convert cTAAR1-driven cAMP/PKA activation of CREB1 into inducible transgene expression.

Usefulness & Problems

Why this is useful

These promoters are useful for coupling an upstream pharmacologically triggered signaling pathway to transcriptional output. In the reported designer circuit, they enabled guanabenz-responsive control of therapeutic gene expression downstream of rewired cTAAR1 signaling.

Source:

In mice developing symptoms of the metabolic syndrome, this three-in-one treatment strategy was able to simultaneously attenuate hypertension and hyperglycemia as well as obesity and dyslipidemia

Problem solved

They address the problem of translating cTAAR1-mediated intracellular cAMP/PKA signaling into programmable gene expression. Specifically, they provide a synthetic transcriptional interface that links CREB1 activation to expression of payload genes such as GLP-1-Fc(mIgG)-Leptin.

Source:

In mice developing symptoms of the metabolic syndrome, this three-in-one treatment strategy was able to simultaneously attenuate hypertension and hyperglycemia as well as obesity and dyslipidemia

Problem links

Need conditional control of signaling activity

Derived

Synthetic promoters containing CREB1-specific cAMP response elements are engineered transcriptional control sequences used in a designer signaling circuit. In the cited system, they convert cTAAR1-driven cAMP/PKA activation of CREB1 into inducible transgene expression.

Need conditional recombination or state switching

Derived

Synthetic promoters containing CREB1-specific cAMP response elements are engineered transcriptional control sequences used in a designer signaling circuit. In the cited system, they convert cTAAR1-driven cAMP/PKA activation of CREB1 into inducible transgene expression.

Need tighter control over gene expression timing or amplitude

Derived

Synthetic promoters containing CREB1-specific cAMP response elements are engineered transcriptional control sequences used in a designer signaling circuit. In the cited system, they convert cTAAR1-driven cAMP/PKA activation of CREB1 into inducible transgene expression.

Taxonomy & Function

Primary hierarchy

Mechanism Branch

Architecture: A reusable architecture pattern for arranging parts into an engineered system.

Techniques

No technique tags yet.

Target processes

recombinationsignalingtranscription

Implementation Constraints

cofactor dependency: cofactor requirement unknownencoding mode: genetically encodedimplementation constraint: context specific validationoperating role: regulator

The reported implementation places these synthetic promoters downstream of a rewired cTAAR1 signaling module that activates CREB1 via cAMP/PKA. Practical construct details beyond the presence of CREB1-specific cAMP response elements are not provided in the supplied evidence.

Evidence is limited to a single cited study and a specific circuit context involving cTAAR1, CREB1, and therapeutic transgene expression. The supplied evidence does not report promoter sequence architecture, dynamic range, basal leak, cell-type generality, or independent replication.

Validation

Cell-freeBacteriaMammalianMouseHumanTherapeuticIndep. Replication

Supporting Sources

Ranked Claims

Claim 1activation mechanismsupports2012Source 1needs review

Guanabenz activates a synthetic signal cascade that stimulates secretion of GLP-1 and leptin.

the clinically licensed antihypertensive drug guanabenz (Wytensin) activates a synthetic signal cascade that stimulates the secretion of metabolically active peptides GLP-1 and leptin
Claim 2activation mechanismsupports2012Source 1needs review

Guanabenz activates a synthetic signal cascade that stimulates secretion of GLP-1 and leptin.

the clinically licensed antihypertensive drug guanabenz (Wytensin) activates a synthetic signal cascade that stimulates the secretion of metabolically active peptides GLP-1 and leptin
Claim 3activation mechanismsupports2012Source 1needs review

Guanabenz activates a synthetic signal cascade that stimulates secretion of GLP-1 and leptin.

the clinically licensed antihypertensive drug guanabenz (Wytensin) activates a synthetic signal cascade that stimulates the secretion of metabolically active peptides GLP-1 and leptin
Claim 4activation mechanismsupports2012Source 1needs review

Guanabenz activates a synthetic signal cascade that stimulates secretion of GLP-1 and leptin.

the clinically licensed antihypertensive drug guanabenz (Wytensin) activates a synthetic signal cascade that stimulates the secretion of metabolically active peptides GLP-1 and leptin
Claim 5activation mechanismsupports2012Source 1needs review

Guanabenz activates a synthetic signal cascade that stimulates secretion of GLP-1 and leptin.

the clinically licensed antihypertensive drug guanabenz (Wytensin) activates a synthetic signal cascade that stimulates the secretion of metabolically active peptides GLP-1 and leptin
Claim 6activation mechanismsupports2012Source 1needs review

Guanabenz activates a synthetic signal cascade that stimulates secretion of GLP-1 and leptin.

the clinically licensed antihypertensive drug guanabenz (Wytensin) activates a synthetic signal cascade that stimulates the secretion of metabolically active peptides GLP-1 and leptin
Claim 7activation mechanismsupports2012Source 1needs review

Guanabenz activates a synthetic signal cascade that stimulates secretion of GLP-1 and leptin.

the clinically licensed antihypertensive drug guanabenz (Wytensin) activates a synthetic signal cascade that stimulates the secretion of metabolically active peptides GLP-1 and leptin
Claim 8dose responsive controlsupports2012Source 1needs review

Guanabenz dose-dependently controls expression of GLP-1-Fc(mIgG)-Leptin.

it was possible to use guanabenz to dose-dependently control expression of GLP-1-Fc(mIgG)-Leptin
Claim 9dose responsive controlsupports2012Source 1needs review

Guanabenz dose-dependently controls expression of GLP-1-Fc(mIgG)-Leptin.

it was possible to use guanabenz to dose-dependently control expression of GLP-1-Fc(mIgG)-Leptin
Claim 10dose responsive controlsupports2012Source 1needs review

Guanabenz dose-dependently controls expression of GLP-1-Fc(mIgG)-Leptin.

it was possible to use guanabenz to dose-dependently control expression of GLP-1-Fc(mIgG)-Leptin
Claim 11dose responsive controlsupports2012Source 1needs review

Guanabenz dose-dependently controls expression of GLP-1-Fc(mIgG)-Leptin.

it was possible to use guanabenz to dose-dependently control expression of GLP-1-Fc(mIgG)-Leptin
Claim 12dose responsive controlsupports2012Source 1needs review

Guanabenz dose-dependently controls expression of GLP-1-Fc(mIgG)-Leptin.

it was possible to use guanabenz to dose-dependently control expression of GLP-1-Fc(mIgG)-Leptin
Claim 13dose responsive controlsupports2012Source 1needs review

Guanabenz dose-dependently controls expression of GLP-1-Fc(mIgG)-Leptin.

it was possible to use guanabenz to dose-dependently control expression of GLP-1-Fc(mIgG)-Leptin
Claim 14dose responsive controlsupports2012Source 1needs review

Guanabenz dose-dependently controls expression of GLP-1-Fc(mIgG)-Leptin.

it was possible to use guanabenz to dose-dependently control expression of GLP-1-Fc(mIgG)-Leptin
Claim 15mechanistic designsupports2012Source 1needs review

Signal transduction of cTAAR1 was functionally rewired through cAMP/PKA-mediated activation of CREB1 to drive transcription from synthetic promoters containing CREB1-specific cAMP response elements.

the signal transduction of a chimeric trace-amine-associated receptor 1 (cTAAR1) was functionally rewired via cAMP and cAMP-dependent phosphokinase A (PKA)-mediated activation of the cAMP-response element binding protein (CREB1) to transcription of synthetic promoters containing CREB1-specific cAMP response elements
Claim 16mechanistic designsupports2012Source 1needs review

Signal transduction of cTAAR1 was functionally rewired through cAMP/PKA-mediated activation of CREB1 to drive transcription from synthetic promoters containing CREB1-specific cAMP response elements.

the signal transduction of a chimeric trace-amine-associated receptor 1 (cTAAR1) was functionally rewired via cAMP and cAMP-dependent phosphokinase A (PKA)-mediated activation of the cAMP-response element binding protein (CREB1) to transcription of synthetic promoters containing CREB1-specific cAMP response elements
Claim 17mechanistic designsupports2012Source 1needs review

Signal transduction of cTAAR1 was functionally rewired through cAMP/PKA-mediated activation of CREB1 to drive transcription from synthetic promoters containing CREB1-specific cAMP response elements.

the signal transduction of a chimeric trace-amine-associated receptor 1 (cTAAR1) was functionally rewired via cAMP and cAMP-dependent phosphokinase A (PKA)-mediated activation of the cAMP-response element binding protein (CREB1) to transcription of synthetic promoters containing CREB1-specific cAMP response elements
Claim 18mechanistic designsupports2012Source 1needs review

Signal transduction of cTAAR1 was functionally rewired through cAMP/PKA-mediated activation of CREB1 to drive transcription from synthetic promoters containing CREB1-specific cAMP response elements.

the signal transduction of a chimeric trace-amine-associated receptor 1 (cTAAR1) was functionally rewired via cAMP and cAMP-dependent phosphokinase A (PKA)-mediated activation of the cAMP-response element binding protein (CREB1) to transcription of synthetic promoters containing CREB1-specific cAMP response elements
Claim 19mechanistic designsupports2012Source 1needs review

Signal transduction of cTAAR1 was functionally rewired through cAMP/PKA-mediated activation of CREB1 to drive transcription from synthetic promoters containing CREB1-specific cAMP response elements.

the signal transduction of a chimeric trace-amine-associated receptor 1 (cTAAR1) was functionally rewired via cAMP and cAMP-dependent phosphokinase A (PKA)-mediated activation of the cAMP-response element binding protein (CREB1) to transcription of synthetic promoters containing CREB1-specific cAMP response elements
Claim 20mechanistic designsupports2012Source 1needs review

Signal transduction of cTAAR1 was functionally rewired through cAMP/PKA-mediated activation of CREB1 to drive transcription from synthetic promoters containing CREB1-specific cAMP response elements.

the signal transduction of a chimeric trace-amine-associated receptor 1 (cTAAR1) was functionally rewired via cAMP and cAMP-dependent phosphokinase A (PKA)-mediated activation of the cAMP-response element binding protein (CREB1) to transcription of synthetic promoters containing CREB1-specific cAMP response elements
Claim 21mechanistic designsupports2012Source 1needs review

Signal transduction of cTAAR1 was functionally rewired through cAMP/PKA-mediated activation of CREB1 to drive transcription from synthetic promoters containing CREB1-specific cAMP response elements.

the signal transduction of a chimeric trace-amine-associated receptor 1 (cTAAR1) was functionally rewired via cAMP and cAMP-dependent phosphokinase A (PKA)-mediated activation of the cAMP-response element binding protein (CREB1) to transcription of synthetic promoters containing CREB1-specific cAMP response elements
Claim 22therapeutic effectsupports2012Source 1needs review

In mice developing symptoms of metabolic syndrome, the three-in-one treatment strategy simultaneously attenuated hypertension, hyperglycemia, obesity, and dyslipidemia.

In mice developing symptoms of the metabolic syndrome, this three-in-one treatment strategy was able to simultaneously attenuate hypertension and hyperglycemia as well as obesity and dyslipidemia
Claim 23therapeutic effectsupports2012Source 1needs review

In mice developing symptoms of metabolic syndrome, the three-in-one treatment strategy simultaneously attenuated hypertension, hyperglycemia, obesity, and dyslipidemia.

In mice developing symptoms of the metabolic syndrome, this three-in-one treatment strategy was able to simultaneously attenuate hypertension and hyperglycemia as well as obesity and dyslipidemia
Claim 24therapeutic effectsupports2012Source 1needs review

In mice developing symptoms of metabolic syndrome, the three-in-one treatment strategy simultaneously attenuated hypertension, hyperglycemia, obesity, and dyslipidemia.

In mice developing symptoms of the metabolic syndrome, this three-in-one treatment strategy was able to simultaneously attenuate hypertension and hyperglycemia as well as obesity and dyslipidemia
Claim 25therapeutic effectsupports2012Source 1needs review

In mice developing symptoms of metabolic syndrome, the three-in-one treatment strategy simultaneously attenuated hypertension, hyperglycemia, obesity, and dyslipidemia.

In mice developing symptoms of the metabolic syndrome, this three-in-one treatment strategy was able to simultaneously attenuate hypertension and hyperglycemia as well as obesity and dyslipidemia
Claim 26therapeutic effectsupports2012Source 1needs review

In mice developing symptoms of metabolic syndrome, the three-in-one treatment strategy simultaneously attenuated hypertension, hyperglycemia, obesity, and dyslipidemia.

In mice developing symptoms of the metabolic syndrome, this three-in-one treatment strategy was able to simultaneously attenuate hypertension and hyperglycemia as well as obesity and dyslipidemia
Claim 27therapeutic effectsupports2012Source 1needs review

In mice developing symptoms of metabolic syndrome, the three-in-one treatment strategy simultaneously attenuated hypertension, hyperglycemia, obesity, and dyslipidemia.

In mice developing symptoms of the metabolic syndrome, this three-in-one treatment strategy was able to simultaneously attenuate hypertension and hyperglycemia as well as obesity and dyslipidemia
Claim 28therapeutic effectsupports2012Source 1needs review

In mice developing symptoms of metabolic syndrome, the three-in-one treatment strategy simultaneously attenuated hypertension, hyperglycemia, obesity, and dyslipidemia.

In mice developing symptoms of the metabolic syndrome, this three-in-one treatment strategy was able to simultaneously attenuate hypertension and hyperglycemia as well as obesity and dyslipidemia

Approval Evidence

1 source1 linked approval claimfirst-pass slug synthetic-promoters-containing-creb1-specific-camp-response-elements
transcription of synthetic promoters containing CREB1-specific cAMP response elements

Source:

mechanistic designsupports

Signal transduction of cTAAR1 was functionally rewired through cAMP/PKA-mediated activation of CREB1 to drive transcription from synthetic promoters containing CREB1-specific cAMP response elements.

the signal transduction of a chimeric trace-amine-associated receptor 1 (cTAAR1) was functionally rewired via cAMP and cAMP-dependent phosphokinase A (PKA)-mediated activation of the cAMP-response element binding protein (CREB1) to transcription of synthetic promoters containing CREB1-specific cAMP response elements

Source:

Comparisons

Source-backed strengths

The source reports that guanabenz dose-dependently controlled expression of GLP-1-Fc(mIgG)-Leptin through this circuit architecture. The promoters therefore supported signal-dependent transcriptional activation in a pharmacologically actuated designer system.

Compared with CAR-NK

synthetic promoters containing CREB1-specific cAMP response elements and CAR-NK address a similar problem space because they share recombination, signaling.

Shared frame: same top-level item type; shared target processes: recombination, signaling

Relative tradeoffs: appears more independently replicated; looks easier to implement in practice.

synthetic promoters containing CREB1-specific cAMP response elements and chimeric trace-amine-associated receptor 1 address a similar problem space because they share recombination, signaling, transcription.

Shared frame: same top-level item type; shared target processes: recombination, signaling, transcription; shared mechanisms: camp/pka-mediated creb1 activation

Compared with synthetic promoters

synthetic promoters containing CREB1-specific cAMP response elements and synthetic promoters address a similar problem space because they share recombination, transcription.

Shared frame: same top-level item type; shared target processes: recombination, transcription

Relative tradeoffs: appears more independently replicated; looks easier to implement in practice.

Ranked Citations

  1. 1.
    StructuralSource 1Proceedings of the National Academy of Sciences2012Claim 1Claim 2Claim 3

    Extracted from this source document.