Toolkit Items

Browse the toolkit beneath workflows. The mechanism branch runs mechanism -> architecture -> component, while the technique branch runs from high-level approaches down to concrete methods.

2 items matching 1 filter

Mechanism Branch

Layer 1

Mechanisms

Top-level concepts: biophysical action modes such as heterodimerization, photocleavage, or RNA binding.

Layer 2

Architectures

Arrangements that realize or deploy mechanisms, including switches, construct patterns, and delivery strategies.

Layer 3

Components

Low-level parts and sequence-defined elements used inside architectures, including protein domains and RNA elements.

Technique Branch

Layer 1

Approaches

High-level engineering practices such as computational design, directed evolution, sequence verification, and functional assay.

Layer 2

Methods

Concrete methods used to design, build, verify, or characterize engineered systems.

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apical constriction

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optogenetic control of apical constriction

Engineering Method

Optogenetic control of apical constriction is an engineering method that uses light to drive apical constriction and thereby induce synthetic morphogenesis in mammalian tissues. The available evidence supports this method as a light-responsive approach for reshaping tissue architecture.

CFBacMamMusHumTxRep
Ev 28Rep 9Pr 59

OptoShroom3 is an optogenetic multi-component switch developed for fast spatiotemporal control of apical constriction in mammalian epithelia. Illumination reduces the apical surface area of targeted epithelial cells and can induce synthetic tissue deformations and morphogenesis.

CFBacMamMusHumTxRep
Ev 28Rep 9Pr 37
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