Toolkit Items

Browse the toolkit beneath workflows. The mechanism branch runs mechanism -> architecture -> component, while the technique branch runs from high-level approaches down to concrete methods.

3 items matching 1 filter

Mechanism Branch

Layer 1

Mechanisms

Top-level concepts: biophysical action modes such as heterodimerization, photocleavage, or RNA binding.

Layer 2

Architectures

Arrangements that realize or deploy mechanisms, including switches, construct patterns, and delivery strategies.

Layer 3

Components

Low-level parts and sequence-defined elements used inside architectures, including protein domains and RNA elements.

Technique Branch

Layer 1

Approaches

High-level engineering practices such as computational design, directed evolution, sequence verification, and functional assay.

Layer 2

Methods

Concrete methods used to design, build, verify, or characterize engineered systems.

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enzyme colocalization

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synthetic multienzyme complexes

Construct Pattern

Synthetic multienzyme complexes are engineered multienzyme assemblies, spanning static enzyme nanostructures to dynamic enzyme coacervates, that arrange sequential biosynthetic enzymes in metabolon-like configurations. Some complexes assembled inside microbial cells can be isolated as independent catalytic entities and used for ex vivo biosynthesis.

CFBacMamMusHumTxRep
Ev 20Rep 9Pr 71

bacterial microcompartments

Multi-Component Switch

Special emphasis is placed on BMCs for their spatial precision, selective permeability, and ability to encapsulate multi-enzyme pathways. Recent advances in synthetic biology, from orthogonal shell engineering to modular cargo recruitment, underscore their transformative potential for pathway design and metabolic control.

CFBacMamMusHumTxRep
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