Toolkit Items

Browse the toolkit beneath workflows. The mechanism branch runs mechanism -> architecture -> component, while the technique branch runs from high-level approaches down to concrete methods.

11 items matching 1 filter

Mechanism Branch

Layer 1

Mechanisms

Top-level concepts: biophysical action modes such as heterodimerization, photocleavage, or RNA binding.

Layer 2

Architectures

Arrangements that realize or deploy mechanisms, including switches, construct patterns, and delivery strategies.

Layer 3

Components

Low-level parts and sequence-defined elements used inside architectures, including protein domains and RNA elements.

Technique Branch

Layer 1

Approaches

High-level engineering practices such as computational design, directed evolution, sequence verification, and functional assay.

Layer 2

Methods

Concrete methods used to design, build, verify, or characterize engineered systems.

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förster resonance energy transfer (fret)

Showing 1-11 of 11

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near-infrared TC10 FRET biosensor

Construct Pattern

To demonstrate the utility of this tool, we performed multiplex live-cell imaging with a previously developed near-infrared FRET biosensor for the exocytic Rho GTPase TC10.

CFBacMamMusHumTxRep
Ev 28Rep 9Pr 71

single cell FRET measurements

Assay Method

Single cell FRET measurements with Rho GTPase biosensors are a quantitative cell-based assay used in primary human endothelial cells to monitor guanine nucleotide exchange factor activity toward Cdc42 and Rac1. In the cited study, the method was applied to compare the cellular activities of overexpressed endothelial GEFs.

CFBacMamMusHumTxRep
Ev 28Rep 9Pr 71

single-chain genetically encoded RhoB FRET biosensor

Construct Pattern

Here, we describe the development and validation of a single-chain, genetically encoded Förster resonance energy transfer (FRET) biosensor that enables direct visualization of RhoB activity in living cells while preserving its native membrane-targeting determinants.

CFBacMamMusHumTxRep
Ev 28Rep 9Pr 71

nanodisk voltage nanosensors

Construct Pattern

Organic voltage nanosensors based on polystyrene beads and nanodisk technology utilize Fluorescence (Förster) Resonance Energy Transfer (FRET) to sense local electric fields. Non-invasive MP recording from individual targeted sites (synapses and spines) with nanodisks has been realized.

CFBacMamMusHumTxRep
Ev 20Rep 9Pr 71

Booster is a red-shifted genetically encoded FRET biosensor backbone generated by optimizing the order of fluorescent proteins and modulatory domains within a biosensor architecture. In the reported implementation, a Booster-PKA sensor enabled kinase activity readout in a spectral window compatible with CFP/YFP-based FRET biosensors and blue light-responsive optogenetic tools.

CFBacMamMusHumTxRep
Ev 28Rep 9Pr 59
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