Browse the toolkit beneath workflows. The mechanism branch runs mechanism -> architecture -> component, while the technique branch runs from high-level approaches down to concrete methods.
11 items matching 1 filter
Mechanism Branch
Layer 1
Mechanisms
Top-level concepts: biophysical action modes such as heterodimerization, photocleavage, or RNA binding.
Layer 2
Architectures
Arrangements that realize or deploy mechanisms, including switches, construct patterns, and delivery strategies.
Layer 3
Components
Low-level parts and sequence-defined elements used inside architectures, including protein domains and RNA elements.
Technique Branch
Layer 1
Approaches
High-level engineering practices such as computational design, directed evolution, sequence verification, and functional assay.
Layer 2
Methods
Concrete methods used to design, build, verify, or characterize engineered systems.
Showing 1-11 of 11
The feed-forward and feedback control technique is an engineering method proposed for astrocytes that manipulates intracellular IP3 to stabilize Ca2+ concentration. It is described in the context of Ca2+-based molecular communications nanonetworks, where controlled Ca2+ dynamics are intended to support more reliable signaling behavior.
Closed-loop gene networks are synthetic mammalian gene circuit architectures assembled from gene switches in engineered cells. Reported functions of these complex circuits include event memory, oscillatory protein production, and information-processing behaviors, and microencapsulated mammalian cells carrying such networks have been implanted into mice.
Automated optogenetic feedback control is an engineering method that combines light-driven optogenetic regulation with a feedback loop to control gene expression and cell growth. The available evidence supports it as a control framework for precise and robust regulation rather than as a single molecular reagent.
The optoPlateReader (oPR) is an open-source, solid-state, compact hardware platform for automated optogenetic stimulation and spectroscopy in each well of a 96-well plate. It combines an optoPlate illumination module with an optoReader module containing 96 photodiodes and LEDs to enable 96 parallel light measurements and feedback-enabled optical experiments.
Bioreactor designs for optogenetic stimulation are light-delivery and culture-platform configurations used to stimulate optogenetic systems across experimental formats ranging from simple illumination set-ups to microscopy, microtiter plate, and bioreactor designs. These platforms support applications spanning single-cell stimulation to whole-culture illumination and can be integrated with automated measurement and stimulation for computer-controlled experiments.
In silico feedback control strategies are computationally implemented control schemes coupled to optogenetic measurement and light stimulation platforms. They are used to create computer-controlled living systems through automated measurement and stimulation workflows.
Light-induction hardware-software platforms are optogenetic delivery systems that provide controlled illumination using formats ranging from simple illumination set-ups to microscopy, microtiter plate, and bioreactor designs. They are used to stimulate biological systems with light, and automated implementations can support computer-controlled experiments with in silico feedback control.
Microtiter plate designs for optogenetic stimulation are light-delivery platform formats used to apply regulated optical inputs in biological experiments. The cited review places these designs within a broader range of optogenetic hardware spanning simple illumination setups to microtiter plate and bioreactor implementations, with use cases from single-cell stimulation to whole-culture illumination.
We evaluated the following key areas: adaptive and closed-loop DBS systems...
We evaluated the following key areas: adaptive and closed-loop DBS systems...
The system integrates maximum power point tracking (MPPT) to sustain ultrasonic resonance