Toolkit Items

Browse the toolkit beneath workflows. The mechanism branch runs mechanism -> architecture -> component, while the technique branch runs from high-level approaches down to concrete methods.

3 items matching 1 filter

Mechanism Branch

Layer 1

Mechanisms

Top-level concepts: biophysical action modes such as heterodimerization, photocleavage, or RNA binding.

Layer 2

Architectures

Arrangements that realize or deploy mechanisms, including switches, construct patterns, and delivery strategies.

Layer 3

Components

Low-level parts and sequence-defined elements used inside architectures, including protein domains and RNA elements.

Technique Branch

Layer 1

Approaches

High-level engineering practices such as computational design, directed evolution, sequence verification, and functional assay.

Layer 2

Methods

Concrete methods used to design, build, verify, or characterize engineered systems.

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light-dependent receptor activation

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light-activatable FGF receptor

Construct Pattern

The light-activatable FGF receptor is a genetically encoded construct expressed in an epithelial cell line to control MAPK/ERK signaling with light. In the cited study, it functioned as the optical input module for stimulating the pathway during information transmission measurements under random light pulse trains.

CFBacMamMusHumTxRep
Ev 28Rep 9Pr 59

OptoR2 is a light-activated FGFR2 variant engineered to selectively activate signaling by the major fibroblast growth factor receptor in keratinocytes. Upon illumination, it induces FGFR signaling and, in OptoR2-expressing HEK293T cells, promotes migration and proliferation with temporal precision.

CFBacMamMusHumTxRep
Ev 28Rep 9Pr 37
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