Toolkit Items

Browse the toolkit beneath workflows. The mechanism branch runs mechanism -> architecture -> component, while the technique branch runs from high-level approaches down to concrete methods.

6 items matching 1 filter

Mechanism Branch

Layer 1

Mechanisms

Top-level concepts: biophysical action modes such as heterodimerization, photocleavage, or RNA binding.

Layer 2

Architectures

Arrangements that realize or deploy mechanisms, including switches, construct patterns, and delivery strategies.

Layer 3

Components

Low-level parts and sequence-defined elements used inside architectures, including protein domains and RNA elements.

Technique Branch

Layer 1

Approaches

High-level engineering practices such as computational design, directed evolution, sequence verification, and functional assay.

Layer 2

Methods

Concrete methods used to design, build, verify, or characterize engineered systems.

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membrane depolarization

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two-component optogenetics

Multi-Component Switch

Two-component optogenetics is a light-controlled multi-component membrane-potential control strategy that combines rhodopsin cyclases with cyclic nucleotide-gated channels. In the cited source, this architecture is reported to enable depolarization or hyperpolarization of membrane potential by regulating intracellular cyclic nucleotide levels and coupling them to channel activation.

CFBacMamMusHumTxRep
Ev 28Rep 9Pr 37

sodium-selective channelrhodopsins

Protein Domain

This review highlights the natural occurrence and engineered variants of sodium-selective channelrhodopsins (NaChRs), emphasizing their importance in optogenetic applications. These tools offer enhanced specificity in Na+ ion conduction, reducing unwanted effects from other ions, and generating strong depolarizing currents. Some of the NaChRs showed nearly no desensitization upon light illumination.

CFBacMamMusHumTxRep
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