Toolkit Items

Browse the toolkit beneath workflows. The mechanism branch runs mechanism -> architecture -> component, while the technique branch runs from high-level approaches down to concrete methods.

2 items matching 1 filter

Mechanism Branch

Layer 1

Mechanisms

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Top-level concepts: biophysical action modes such as heterodimerization, photocleavage, or RNA binding.

Layer 2

Architectures

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Arrangements that realize or deploy mechanisms, including switches, construct patterns, and delivery strategies.

Layer 3

Components

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Low-level parts and sequence-defined elements used inside architectures, including protein domains and RNA elements.

Technique Branch

Layer 1

Approaches

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High-level engineering practices such as computational design, directed evolution, sequence verification, and functional assay.

Layer 2

Methods

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Concrete methods used to design, build, verify, or characterize engineered systems.

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rna-protein tethering

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stem-loop PEs

Construct Pattern

Stem-loop prime editors (sPEs) are modified prime editing guide RNA constructs in which stem-loop aptamers are added to the 3′ terminus of the pegRNA. This altered pegRNA architecture is used as a basis for tethered prime editors and for split pegRNA prime editor configurations.

CFBacMamMusHumTxRep
Ev 28Rep 9Pr 71

tethered PEs

Construct Pattern

Tethered prime editors (tPEs) are prime editing constructs in which stem-loop aptamer-modified pegRNAs are tethered to Cas9 nickase. The design alters pegRNA architecture to increase prime editing efficiency and flexibility.

CFBacMamMusHumTxRep
Ev 28Rep 9Pr 71
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