Browse the toolkit beneath workflows. The mechanism branch runs mechanism -> architecture -> component, while the technique branch runs from high-level approaches down to concrete methods.
5 items matching 1 filter
Mechanism Branch
Layer 1
Mechanisms
Top-level concepts: biophysical action modes such as heterodimerization, photocleavage, or RNA binding.
Layer 2
Architectures
Arrangements that realize or deploy mechanisms, including switches, construct patterns, and delivery strategies.
Layer 3
Components
Low-level parts and sequence-defined elements used inside architectures, including protein domains and RNA elements.
Technique Branch
Layer 1
Approaches
High-level engineering practices such as computational design, directed evolution, sequence verification, and functional assay.
Layer 2
Methods
Concrete methods used to design, build, verify, or characterize engineered systems.
Showing 1-5 of 5
Biomolecular liquid-liquid phase separation (LLPS) is a cellular organizational phenomenon in which biomolecules demix into condensed phases. The cited review describes LLPS as contributing to cellular homeostasis and specifically to cellular redox maintenance, including redox imbalance sensing, signal transduction, and transcriptional regulation.
The bacteriophytochrome sensor unit is a light-sensing protein domain discussed in photoreceptor histidine kinases. A 2019 review places it among receptor sensor units that use recurring signaling strategies for light-driven signal transduction.
The microbial rhodopsin sensor unit is a light-sensing protein domain discussed in photoreceptor histidine kinases. Available evidence indicates that it participates in recurring signaling strategies shared with LOV and bacteriophytochrome sensor units.
Engineered photoreceptors are protein domains used as light-sensitive actuators in microbial systems. The available evidence indicates that they function in bacterial light sensing and signal transduction and are applied in light-control strategies that modulate gene expression, protein function, and motility.
CcaS/R is an optimized chromatic acclimation sensor/regulator module used as a light-input induction system in a dual light-controlled co-culture platform. In the cited implementation, it operates alongside the blue light-activated YF1-FixJ-PhlF module to regulate population composition.