Toolkit Items

Browse the toolkit beneath workflows. The mechanism branch runs mechanism -> architecture -> component, while the technique branch runs from high-level approaches down to concrete methods.

2 items matching 1 filter

Mechanism Branch

Layer 1

Mechanisms

Top-level concepts: biophysical action modes such as heterodimerization, photocleavage, or RNA binding.

Layer 2

Architectures

Arrangements that realize or deploy mechanisms, including switches, construct patterns, and delivery strategies.

Layer 3

Components

Low-level parts and sequence-defined elements used inside architectures, including protein domains and RNA elements.

Technique Branch

Layer 1

Approaches

High-level engineering practices such as computational design, directed evolution, sequence verification, and functional assay.

Layer 2

Methods

Concrete methods used to design, build, verify, or characterize engineered systems.

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sirna-mediated gene silencing

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polyamidoamine carriers

Delivery Strategy

Polyamidoamine (PAMAM) carriers spanning generations G0-G7 were characterized as polymeric nucleic acid delivery formulations for light-directed delivery in vitro using photochemical internalization (PCI). In an OHS EGFP osteosarcoma model, PAMAM G3-G7 supported efficient light-directed siRNA silencing, whereas EGFP mRNA up-regulation was not detected after EGFP mRNA/PAMAM transfection with or without PCI.

CFBacMamMusHumTxRep
Ev 43Rep 18Pr 71

upconversion nanoparticle-based siRNA nanocarrier

Delivery Strategy

The upconversion nanoparticle-based siRNA nanocarrier is a nanoparticle delivery system reported to enable near-infrared-induced, spatiotemporally controlled gene silencing. It was demonstrated for spatially restricted GFP knockdown in 2D cell culture and 3D multicellular tumor spheroids.

CFBacMamMusHumTxRep
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