Toolkit/Cry2

Cry2

Multi-Component Switch·Research·Since 1998

Also known as: Arabidopsis Cry2, Arabidopsis CRY2, Arabidopsis cryptochrome 2, Arabidopsis cryptochromes, chicken cryptochrome 2, CIB1, CIBN, cry1, CRY1, cry2, Cry2, CRY2, CRY2-integrated approach, cryptochrome 2, Cryptochrome 2, Cryptochrome-2, CRYPTOCHROME 2, CRYPTOCHROME2, cryptochrome CRY2, CRYs, endogenous CRY2, insect CRY2, iTrkB, light-induced cell membrane recruitment and homo-interaction of iTrkB, mammalian-like cryptochrome2, N-terminus of CIB1, Opto modules, plant Cryptochrome-2, tomato CRY2 gene, vertebrate-like cry2 family

Taxonomy: Mechanism Branch / Architecture. Workflows sit above the mechanism and technique branches rather than replacing them.

Assembly Hierarchy

Part of

  • CRY2/CIB1multi component switch← this item is a component

Summary

Cry2 is a blue-light photoreceptor cryptochrome from Arabidopsis used as a light-responsive multi-component optogenetic switch. The supplied evidence supports blue-light-dependent photoactivation linked to regulation of transcription factor control and to CRY2 degradation.

Usefulness & Problems

Why this is useful

Cry2 is useful as a genetically encoded light input module for controlling cellular processes with blue light. The evidence specifically supports applications involving transcriptional regulation through CIB1-related control and light-regulated protein degradation.

Source:

BcLOVclust could also be applied to control signaling proteins and stress granules in mammalian cells.

Source:

While its usage is currently suited for organisms that can be cultured below ∼30 °C

Source:

BcLOVclust could also be applied to control signaling proteins and stress granules in mammalian cells.

Source:

Arabidopsis cryptochrome 2 is employed for optogenetic induction of caspase-8-mediated apoptosis.

Problem solved

Cry2 helps solve the problem of coupling blue-light exposure to reversible or regulatable control of intracellular protein function. In the supplied evidence, this includes blue-light regulation of the transcription factor CIB1 and characterization of pathways that drive CRY2 degradation.

Source:

BcLOVclust could also be applied to control signaling proteins and stress granules in mammalian cells.

Source:

While its usage is currently suited for organisms that can be cultured below ∼30 °C

Source:

BcLOVclust could also be applied to control signaling proteins and stress granules in mammalian cells.

Source:

We demonstrate this system using PKCε and show that this leads to robust activation of a K+ channel (G protein-gated inwardly rectifying K+ channels 1 and 4)

Published Workflows

Objective: Engineer a BcLOV4-derived optogenetic clustering module that retains light-induced clustering while eliminating plasma membrane association and improving kinetic performance for cytoplasmic applications in mammalian cells.

Why it works: The abstract states that key amino acids coupling BcLOV4 clustering to membrane binding were identified and altered, enabling engineering of a variant that preserves light-induced clustering while removing membrane association. The resulting construct was then benchmarked and tuned through fusion design choices to optimize clustering behavior and application scope.

light-induced protein clusteringdecoupling clustering from membrane bindingtemperature-sensitive cluster dissolutionmultiplexed control of independent condensatesamino-acid-level engineering of a photoreceptor variantcomparative benchmarking against Cry2fusion-based tuning with FUS intrinsically disordered regionfusion-partner selection using fluorescent proteins

Taxonomy & Function

Primary hierarchy

Mechanism Branch

Architecture: A composed arrangement of multiple parts that instantiates one or more mechanisms.

Techniques

No technique tags yet.

Target processes

degradationlocalizationsignalingtranscription

Input: Light

Implementation Constraints

The evidence identifies Cry2 as an Arabidopsis blue-light photoreceptor, so implementation is tied to blue-light illumination and expression of the CRY2 protein or derived constructs. However, the supplied material does not provide concrete construct design details, cofactor requirements, delivery strategies, or expression-system recommendations.

The supplied evidence does not directly document specific optogenetic construct architectures, kinetic performance, dynamic range, or validation in non-plant systems for this tool. Claims about clustering, membrane recruitment, conformational uncaging, or heterodimerization as an engineered switch are not directly supported by the provided excerpts.

Validation

Cell-freeBacteriaMammalianMouseHumanTherapeuticIndep. Replication

Observations

successMammalian Cell Lineapplication demo

Inferred from claim claim_2 during normalization. BcLOVclust shows substantially faster clustering and de-clustering kinetics than Cry2. Derived from claim claim_2. Quoted text: This variant-called BcLOVclust-clustered over many cycles with substantially faster clustering and de-clustering kinetics compared to the widely used optogenetic clustering protein Cry2.

Source:

clustering kinetics comparison(substantially faster)de-clustering kinetics comparison(substantially faster)
successMammalian Cell Lineapplication demo

Inferred from claim claim_5 during normalization. At low temperatures, BcLOVclust and Cry2 can be multiplexed in the same cells to control independent protein condensates with light. Derived from claim claim_5. Quoted text: At low temperatures, BcLOVclust and Cry2 could be multiplexed in the same cells, allowing light control of independent protein condensates.

Source:

successMammalian Cell Lineapplication demo

Inferred from claim claim_5 during normalization. At low temperatures, BcLOVclust and Cry2 can be multiplexed in the same cells to control independent protein condensates with light. Derived from claim claim_5. Quoted text: At low temperatures, BcLOVclust and Cry2 could be multiplexed in the same cells, allowing light control of independent protein condensates.

Source:

successMammalian Cell Lineapplication demo

Inferred from claim claim_2 during normalization. BcLOVclust shows substantially faster clustering and de-clustering kinetics than Cry2. Derived from claim claim_2. Quoted text: This variant-called BcLOVclust-clustered over many cycles with substantially faster clustering and de-clustering kinetics compared to the widely used optogenetic clustering protein Cry2.

Source:

clustering kinetics comparison(substantially faster)de-clustering kinetics comparison(substantially faster)
successMammalian Cell Lineapplication demo

Inferred from claim claim_5 during normalization. At low temperatures, BcLOVclust and Cry2 can be multiplexed in the same cells to control independent protein condensates with light. Derived from claim claim_5. Quoted text: At low temperatures, BcLOVclust and Cry2 could be multiplexed in the same cells, allowing light control of independent protein condensates.

Source:

successMammalian Cell Lineapplication demo

Inferred from claim claim_2 during normalization. BcLOVclust shows substantially faster clustering and de-clustering kinetics than Cry2. Derived from claim claim_2. Quoted text: This variant-called BcLOVclust-clustered over many cycles with substantially faster clustering and de-clustering kinetics compared to the widely used optogenetic clustering protein Cry2.

Source:

clustering kinetics comparison(substantially faster)de-clustering kinetics comparison(substantially faster)
successMammalian Cell Lineapplication demo

Inferred from claim claim_5 during normalization. At low temperatures, BcLOVclust and Cry2 can be multiplexed in the same cells to control independent protein condensates with light. Derived from claim claim_5. Quoted text: At low temperatures, BcLOVclust and Cry2 could be multiplexed in the same cells, allowing light control of independent protein condensates.

Source:

successMammalian Cell Lineapplication demo

Inferred from claim claim_2 during normalization. BcLOVclust shows substantially faster clustering and de-clustering kinetics than Cry2. Derived from claim claim_2. Quoted text: This variant-called BcLOVclust-clustered over many cycles with substantially faster clustering and de-clustering kinetics compared to the widely used optogenetic clustering protein Cry2.

Source:

clustering kinetics comparison(substantially faster)de-clustering kinetics comparison(substantially faster)
successMammalian Cell Lineapplication demo

Inferred from claim claim_5 during normalization. At low temperatures, BcLOVclust and Cry2 can be multiplexed in the same cells to control independent protein condensates with light. Derived from claim claim_5. Quoted text: At low temperatures, BcLOVclust and Cry2 could be multiplexed in the same cells, allowing light control of independent protein condensates.

Source:

successMammalian Cell Lineapplication demo

Inferred from claim claim_2 during normalization. BcLOVclust shows substantially faster clustering and de-clustering kinetics than Cry2. Derived from claim claim_2. Quoted text: This variant-called BcLOVclust-clustered over many cycles with substantially faster clustering and de-clustering kinetics compared to the widely used optogenetic clustering protein Cry2.

Source:

clustering kinetics comparison(substantially faster)de-clustering kinetics comparison(substantially faster)
successMammalian Cell Lineapplication demo

Inferred from claim claim_5 during normalization. At low temperatures, BcLOVclust and Cry2 can be multiplexed in the same cells to control independent protein condensates with light. Derived from claim claim_5. Quoted text: At low temperatures, BcLOVclust and Cry2 could be multiplexed in the same cells, allowing light control of independent protein condensates.

Source:

successMammalian Cell Lineapplication demo

Inferred from claim claim_2 during normalization. BcLOVclust shows substantially faster clustering and de-clustering kinetics than Cry2. Derived from claim claim_2. Quoted text: This variant-called BcLOVclust-clustered over many cycles with substantially faster clustering and de-clustering kinetics compared to the widely used optogenetic clustering protein Cry2.

Source:

clustering kinetics comparison(substantially faster)de-clustering kinetics comparison(substantially faster)
successMammalian Cell Lineapplication demo

Inferred from claim claim_5 during normalization. At low temperatures, BcLOVclust and Cry2 can be multiplexed in the same cells to control independent protein condensates with light. Derived from claim claim_5. Quoted text: At low temperatures, BcLOVclust and Cry2 could be multiplexed in the same cells, allowing light control of independent protein condensates.

Source:

successMammalian Cell Lineapplication demo

Inferred from claim claim_2 during normalization. BcLOVclust shows substantially faster clustering and de-clustering kinetics than Cry2. Derived from claim claim_2. Quoted text: This variant-called BcLOVclust-clustered over many cycles with substantially faster clustering and de-clustering kinetics compared to the widely used optogenetic clustering protein Cry2.

Source:

clustering kinetics comparison(substantially faster)de-clustering kinetics comparison(substantially faster)
successMammalian Cell Lineapplication demo

Inferred from claim claim_5 during normalization. At low temperatures, BcLOVclust and Cry2 can be multiplexed in the same cells to control independent protein condensates with light. Derived from claim claim_5. Quoted text: At low temperatures, BcLOVclust and Cry2 could be multiplexed in the same cells, allowing light control of independent protein condensates.

Source:

successMammalian Cell Lineapplication demo

Inferred from claim claim_2 during normalization. BcLOVclust shows substantially faster clustering and de-clustering kinetics than Cry2. Derived from claim claim_2. Quoted text: This variant-called BcLOVclust-clustered over many cycles with substantially faster clustering and de-clustering kinetics compared to the widely used optogenetic clustering protein Cry2.

Source:

clustering kinetics comparison(substantially faster)de-clustering kinetics comparison(substantially faster)
successMammalian Cell Linemechanistic demo

Inferred from claim claim_3 during normalization. Upon blue light illumination, CRY2 and CIB1 dimerize, reconstitute split-TurboID, and initiate biotinylation. Derived from claim claim_3. Quoted text: upon illumination with blue light, CRY2 and CIB1 dimerize, reconstitute split-TurboID and initiate biotinylation

Source:

successMammalian Cell Linemechanistic demo

Inferred from claim claim_3 during normalization. Upon blue light illumination, CRY2 and CIB1 dimerize, reconstitute split-TurboID, and initiate biotinylation. Derived from claim claim_3. Quoted text: upon illumination with blue light, CRY2 and CIB1 dimerize, reconstitute split-TurboID and initiate biotinylation

Source:

successMammalian Cell Linemechanistic demo

Inferred from claim claim_3 during normalization. Upon blue light illumination, CRY2 and CIB1 dimerize, reconstitute split-TurboID, and initiate biotinylation. Derived from claim claim_3. Quoted text: upon illumination with blue light, CRY2 and CIB1 dimerize, reconstitute split-TurboID and initiate biotinylation

Source:

successMammalian Cell Linemechanistic demo

Inferred from claim claim_3 during normalization. Upon blue light illumination, CRY2 and CIB1 dimerize, reconstitute split-TurboID, and initiate biotinylation. Derived from claim claim_3. Quoted text: upon illumination with blue light, CRY2 and CIB1 dimerize, reconstitute split-TurboID and initiate biotinylation

Source:

successMammalian Cell Linemechanistic demo

Inferred from claim claim_3 during normalization. Upon blue light illumination, CRY2 and CIB1 dimerize, reconstitute split-TurboID, and initiate biotinylation. Derived from claim claim_3. Quoted text: upon illumination with blue light, CRY2 and CIB1 dimerize, reconstitute split-TurboID and initiate biotinylation

Source:

successMammalian Cell Linemechanistic demo

Inferred from claim claim_3 during normalization. Upon blue light illumination, CRY2 and CIB1 dimerize, reconstitute split-TurboID, and initiate biotinylation. Derived from claim claim_3. Quoted text: upon illumination with blue light, CRY2 and CIB1 dimerize, reconstitute split-TurboID and initiate biotinylation

Source:

successMammalian Cell Linemechanistic demo

Inferred from claim claim_3 during normalization. Upon blue light illumination, CRY2 and CIB1 dimerize, reconstitute split-TurboID, and initiate biotinylation. Derived from claim claim_3. Quoted text: upon illumination with blue light, CRY2 and CIB1 dimerize, reconstitute split-TurboID and initiate biotinylation

Source:

Supporting Sources

Source 60primary paper1998Proceedings of the National Academy of Sciences

Ranked Claims

Claim 1application scopesupports2024Source 15needs review

BcLOVclust can be applied to control signaling proteins and stress granules in mammalian cells.

BcLOVclust could also be applied to control signaling proteins and stress granules in mammalian cells.
Claim 2application scopesupports2024Source 15needs review

BcLOVclust can be applied to control signaling proteins and stress granules in mammalian cells.

BcLOVclust could also be applied to control signaling proteins and stress granules in mammalian cells.
Claim 3application scopesupports2024Source 15needs review

BcLOVclust can be applied to control signaling proteins and stress granules in mammalian cells.

BcLOVclust could also be applied to control signaling proteins and stress granules in mammalian cells.
Claim 4application scopesupports2024Source 15needs review

BcLOVclust can be applied to control signaling proteins and stress granules in mammalian cells.

BcLOVclust could also be applied to control signaling proteins and stress granules in mammalian cells.
Claim 5application scopesupports2024Source 15needs review

BcLOVclust can be applied to control signaling proteins and stress granules in mammalian cells.

BcLOVclust could also be applied to control signaling proteins and stress granules in mammalian cells.
Claim 6application scopesupports2024Source 15needs review

BcLOVclust can be applied to control signaling proteins and stress granules in mammalian cells.

BcLOVclust could also be applied to control signaling proteins and stress granules in mammalian cells.
Claim 7application scopesupports2024Source 15needs review

BcLOVclust can be applied to control signaling proteins and stress granules in mammalian cells.

BcLOVclust could also be applied to control signaling proteins and stress granules in mammalian cells.
Claim 8application scopesupports2024Source 15needs review

BcLOVclust can be applied to control signaling proteins and stress granules in mammalian cells.

BcLOVclust could also be applied to control signaling proteins and stress granules in mammalian cells.
Claim 9comparative performancesupports2024Source 15needs review

BcLOVclust shows substantially faster clustering and de-clustering kinetics than Cry2.

This variant-called BcLOVclust-clustered over many cycles with substantially faster clustering and de-clustering kinetics compared to the widely used optogenetic clustering protein Cry2.
clustering kinetics comparison substantially fasterde-clustering kinetics comparison substantially faster
Claim 10comparative performancesupports2024Source 15needs review

BcLOVclust shows substantially faster clustering and de-clustering kinetics than Cry2.

This variant-called BcLOVclust-clustered over many cycles with substantially faster clustering and de-clustering kinetics compared to the widely used optogenetic clustering protein Cry2.
clustering kinetics comparison substantially fasterde-clustering kinetics comparison substantially faster
Claim 11comparative performancesupports2024Source 15needs review

BcLOVclust shows substantially faster clustering and de-clustering kinetics than Cry2.

This variant-called BcLOVclust-clustered over many cycles with substantially faster clustering and de-clustering kinetics compared to the widely used optogenetic clustering protein Cry2.
clustering kinetics comparison substantially fasterde-clustering kinetics comparison substantially faster
Claim 12comparative performancesupports2024Source 15needs review

BcLOVclust shows substantially faster clustering and de-clustering kinetics than Cry2.

This variant-called BcLOVclust-clustered over many cycles with substantially faster clustering and de-clustering kinetics compared to the widely used optogenetic clustering protein Cry2.
clustering kinetics comparison substantially fasterde-clustering kinetics comparison substantially faster
Claim 13comparative performancesupports2024Source 15needs review

BcLOVclust shows substantially faster clustering and de-clustering kinetics than Cry2.

This variant-called BcLOVclust-clustered over many cycles with substantially faster clustering and de-clustering kinetics compared to the widely used optogenetic clustering protein Cry2.
clustering kinetics comparison substantially fasterde-clustering kinetics comparison substantially faster
Claim 14comparative performancesupports2024Source 15needs review

BcLOVclust shows substantially faster clustering and de-clustering kinetics than Cry2.

This variant-called BcLOVclust-clustered over many cycles with substantially faster clustering and de-clustering kinetics compared to the widely used optogenetic clustering protein Cry2.
clustering kinetics comparison substantially fasterde-clustering kinetics comparison substantially faster
Claim 15comparative performancesupports2024Source 15needs review

BcLOVclust shows substantially faster clustering and de-clustering kinetics than Cry2.

This variant-called BcLOVclust-clustered over many cycles with substantially faster clustering and de-clustering kinetics compared to the widely used optogenetic clustering protein Cry2.
clustering kinetics comparison substantially fasterde-clustering kinetics comparison substantially faster
Claim 16comparative performancesupports2024Source 15needs review

BcLOVclust shows substantially faster clustering and de-clustering kinetics than Cry2.

This variant-called BcLOVclust-clustered over many cycles with substantially faster clustering and de-clustering kinetics compared to the widely used optogenetic clustering protein Cry2.
clustering kinetics comparison substantially fasterde-clustering kinetics comparison substantially faster
Claim 17engineered capabilitysupports2024Source 15needs review

BcLOVclust is an engineered BcLOV4-derived variant that clusters in the cytoplasm and does not associate with the membrane in response to blue light.

Herein we identify key amino acids that couple BcLOV4 clustering to membrane binding, allowing us to engineer a variant that clusters in the cytoplasm and does not associate with the membrane in response to blue light.
Claim 18engineered capabilitysupports2024Source 15needs review

BcLOVclust is an engineered BcLOV4-derived variant that clusters in the cytoplasm and does not associate with the membrane in response to blue light.

Herein we identify key amino acids that couple BcLOV4 clustering to membrane binding, allowing us to engineer a variant that clusters in the cytoplasm and does not associate with the membrane in response to blue light.
Claim 19engineered capabilitysupports2024Source 15needs review

BcLOVclust is an engineered BcLOV4-derived variant that clusters in the cytoplasm and does not associate with the membrane in response to blue light.

Herein we identify key amino acids that couple BcLOV4 clustering to membrane binding, allowing us to engineer a variant that clusters in the cytoplasm and does not associate with the membrane in response to blue light.
Claim 20engineered capabilitysupports2024Source 15needs review

BcLOVclust is an engineered BcLOV4-derived variant that clusters in the cytoplasm and does not associate with the membrane in response to blue light.

Herein we identify key amino acids that couple BcLOV4 clustering to membrane binding, allowing us to engineer a variant that clusters in the cytoplasm and does not associate with the membrane in response to blue light.
Claim 21engineered capabilitysupports2024Source 15needs review

BcLOVclust is an engineered BcLOV4-derived variant that clusters in the cytoplasm and does not associate with the membrane in response to blue light.

Herein we identify key amino acids that couple BcLOV4 clustering to membrane binding, allowing us to engineer a variant that clusters in the cytoplasm and does not associate with the membrane in response to blue light.
Claim 22engineered capabilitysupports2024Source 15needs review

BcLOVclust is an engineered BcLOV4-derived variant that clusters in the cytoplasm and does not associate with the membrane in response to blue light.

Herein we identify key amino acids that couple BcLOV4 clustering to membrane binding, allowing us to engineer a variant that clusters in the cytoplasm and does not associate with the membrane in response to blue light.
Claim 23engineered capabilitysupports2024Source 15needs review

BcLOVclust is an engineered BcLOV4-derived variant that clusters in the cytoplasm and does not associate with the membrane in response to blue light.

Herein we identify key amino acids that couple BcLOV4 clustering to membrane binding, allowing us to engineer a variant that clusters in the cytoplasm and does not associate with the membrane in response to blue light.
Claim 24engineered capabilitysupports2024Source 15needs review

BcLOVclust is an engineered BcLOV4-derived variant that clusters in the cytoplasm and does not associate with the membrane in response to blue light.

Herein we identify key amino acids that couple BcLOV4 clustering to membrane binding, allowing us to engineer a variant that clusters in the cytoplasm and does not associate with the membrane in response to blue light.
Claim 25environmental sensitivitysupports2024Source 15needs review

BcLOVclust is temperature sensitive, and its light-induced clusters dissolve faster at higher temperature despite constant illumination.

Like wt BcLOV4, BcLOVclust activity was sensitive to temperature: light-induced clusters spontaneously dissolved at a rate that increased with temperature despite constant illumination.
Claim 26environmental sensitivitysupports2024Source 15needs review

BcLOVclust is temperature sensitive, and its light-induced clusters dissolve faster at higher temperature despite constant illumination.

Like wt BcLOV4, BcLOVclust activity was sensitive to temperature: light-induced clusters spontaneously dissolved at a rate that increased with temperature despite constant illumination.
Claim 27environmental sensitivitysupports2024Source 15needs review

BcLOVclust is temperature sensitive, and its light-induced clusters dissolve faster at higher temperature despite constant illumination.

Like wt BcLOV4, BcLOVclust activity was sensitive to temperature: light-induced clusters spontaneously dissolved at a rate that increased with temperature despite constant illumination.
Claim 28environmental sensitivitysupports2024Source 15needs review

BcLOVclust is temperature sensitive, and its light-induced clusters dissolve faster at higher temperature despite constant illumination.

Like wt BcLOV4, BcLOVclust activity was sensitive to temperature: light-induced clusters spontaneously dissolved at a rate that increased with temperature despite constant illumination.
Claim 29environmental sensitivitysupports2024Source 15needs review

BcLOVclust is temperature sensitive, and its light-induced clusters dissolve faster at higher temperature despite constant illumination.

Like wt BcLOV4, BcLOVclust activity was sensitive to temperature: light-induced clusters spontaneously dissolved at a rate that increased with temperature despite constant illumination.
Claim 30environmental sensitivitysupports2024Source 15needs review

BcLOVclust is temperature sensitive, and its light-induced clusters dissolve faster at higher temperature despite constant illumination.

Like wt BcLOV4, BcLOVclust activity was sensitive to temperature: light-induced clusters spontaneously dissolved at a rate that increased with temperature despite constant illumination.
Claim 31environmental sensitivitysupports2024Source 15needs review

BcLOVclust is temperature sensitive, and its light-induced clusters dissolve faster at higher temperature despite constant illumination.

Like wt BcLOV4, BcLOVclust activity was sensitive to temperature: light-induced clusters spontaneously dissolved at a rate that increased with temperature despite constant illumination.
Claim 32environmental sensitivitysupports2024Source 15needs review

BcLOVclust is temperature sensitive, and its light-induced clusters dissolve faster at higher temperature despite constant illumination.

Like wt BcLOV4, BcLOVclust activity was sensitive to temperature: light-induced clusters spontaneously dissolved at a rate that increased with temperature despite constant illumination.
Claim 33modulation strategysupports2024Source 15needs review

BcLOVclust clustering magnitude can be strengthened by appending a FUS intrinsically disordered region or by selecting the fused fluorescent protein.

The magnitude of clustering could be strengthened by appending an intrinsically disordered region from the fused in sarcoma (FUS) protein, or by selecting the appropriate fluorescent protein to which it was fused.
Claim 34modulation strategysupports2024Source 15needs review

BcLOVclust clustering magnitude can be strengthened by appending a FUS intrinsically disordered region or by selecting the fused fluorescent protein.

The magnitude of clustering could be strengthened by appending an intrinsically disordered region from the fused in sarcoma (FUS) protein, or by selecting the appropriate fluorescent protein to which it was fused.
Claim 35modulation strategysupports2024Source 15needs review

BcLOVclust clustering magnitude can be strengthened by appending a FUS intrinsically disordered region or by selecting the fused fluorescent protein.

The magnitude of clustering could be strengthened by appending an intrinsically disordered region from the fused in sarcoma (FUS) protein, or by selecting the appropriate fluorescent protein to which it was fused.
Claim 36modulation strategysupports2024Source 15needs review

BcLOVclust clustering magnitude can be strengthened by appending a FUS intrinsically disordered region or by selecting the fused fluorescent protein.

The magnitude of clustering could be strengthened by appending an intrinsically disordered region from the fused in sarcoma (FUS) protein, or by selecting the appropriate fluorescent protein to which it was fused.
Claim 37modulation strategysupports2024Source 15needs review

BcLOVclust clustering magnitude can be strengthened by appending a FUS intrinsically disordered region or by selecting the fused fluorescent protein.

The magnitude of clustering could be strengthened by appending an intrinsically disordered region from the fused in sarcoma (FUS) protein, or by selecting the appropriate fluorescent protein to which it was fused.
Claim 38modulation strategysupports2024Source 15needs review

BcLOVclust clustering magnitude can be strengthened by appending a FUS intrinsically disordered region or by selecting the fused fluorescent protein.

The magnitude of clustering could be strengthened by appending an intrinsically disordered region from the fused in sarcoma (FUS) protein, or by selecting the appropriate fluorescent protein to which it was fused.
Claim 39modulation strategysupports2024Source 15needs review

BcLOVclust clustering magnitude can be strengthened by appending a FUS intrinsically disordered region or by selecting the fused fluorescent protein.

The magnitude of clustering could be strengthened by appending an intrinsically disordered region from the fused in sarcoma (FUS) protein, or by selecting the appropriate fluorescent protein to which it was fused.
Claim 40modulation strategysupports2024Source 15needs review

BcLOVclust clustering magnitude can be strengthened by appending a FUS intrinsically disordered region or by selecting the fused fluorescent protein.

The magnitude of clustering could be strengthened by appending an intrinsically disordered region from the fused in sarcoma (FUS) protein, or by selecting the appropriate fluorescent protein to which it was fused.
Claim 41multiplexing capabilitysupports2024Source 15needs review

At low temperatures, BcLOVclust and Cry2 can be multiplexed in the same cells to control independent protein condensates with light.

At low temperatures, BcLOVclust and Cry2 could be multiplexed in the same cells, allowing light control of independent protein condensates.
Claim 42multiplexing capabilitysupports2024Source 15needs review

At low temperatures, BcLOVclust and Cry2 can be multiplexed in the same cells to control independent protein condensates with light.

At low temperatures, BcLOVclust and Cry2 could be multiplexed in the same cells, allowing light control of independent protein condensates.
Claim 43multiplexing capabilitysupports2024Source 15needs review

At low temperatures, BcLOVclust and Cry2 can be multiplexed in the same cells to control independent protein condensates with light.

At low temperatures, BcLOVclust and Cry2 could be multiplexed in the same cells, allowing light control of independent protein condensates.
Claim 44multiplexing capabilitysupports2024Source 15needs review

At low temperatures, BcLOVclust and Cry2 can be multiplexed in the same cells to control independent protein condensates with light.

At low temperatures, BcLOVclust and Cry2 could be multiplexed in the same cells, allowing light control of independent protein condensates.
Claim 45multiplexing capabilitysupports2024Source 15needs review

At low temperatures, BcLOVclust and Cry2 can be multiplexed in the same cells to control independent protein condensates with light.

At low temperatures, BcLOVclust and Cry2 could be multiplexed in the same cells, allowing light control of independent protein condensates.
Claim 46multiplexing capabilitysupports2024Source 15needs review

At low temperatures, BcLOVclust and Cry2 can be multiplexed in the same cells to control independent protein condensates with light.

At low temperatures, BcLOVclust and Cry2 could be multiplexed in the same cells, allowing light control of independent protein condensates.
Claim 47multiplexing capabilitysupports2024Source 15needs review

At low temperatures, BcLOVclust and Cry2 can be multiplexed in the same cells to control independent protein condensates with light.

At low temperatures, BcLOVclust and Cry2 could be multiplexed in the same cells, allowing light control of independent protein condensates.
Claim 48multiplexing capabilitysupports2024Source 15needs review

At low temperatures, BcLOVclust and Cry2 can be multiplexed in the same cells to control independent protein condensates with light.

At low temperatures, BcLOVclust and Cry2 could be multiplexed in the same cells, allowing light control of independent protein condensates.
Claim 49use constraintsupports2024Source 15needs review

BcLOVclust is currently best suited for cells and organisms cultured below approximately 30 °C rather than physiological mammalian temperatures.

While its usage is currently best suited in cells and organisms that can be cultured below ∼30 °C, a deeper understanding of BcLOVclust thermal response will further enable its use at physiological mammalian temperatures.
recommended culture temperature upper range 30 °C
Claim 50use constraintsupports2024Source 15needs review

BcLOVclust is currently best suited for cells and organisms cultured below approximately 30 °C rather than physiological mammalian temperatures.

While its usage is currently best suited in cells and organisms that can be cultured below ∼30 °C, a deeper understanding of BcLOVclust thermal response will further enable its use at physiological mammalian temperatures.
recommended culture temperature upper range 30 °C
Claim 51use constraintsupports2024Source 15needs review

BcLOVclust is currently best suited for cells and organisms cultured below approximately 30 °C rather than physiological mammalian temperatures.

While its usage is currently best suited in cells and organisms that can be cultured below ∼30 °C, a deeper understanding of BcLOVclust thermal response will further enable its use at physiological mammalian temperatures.
recommended culture temperature upper range 30 °C
Claim 52use constraintsupports2024Source 15needs review

BcLOVclust is currently best suited for cells and organisms cultured below approximately 30 °C rather than physiological mammalian temperatures.

While its usage is currently best suited in cells and organisms that can be cultured below ∼30 °C, a deeper understanding of BcLOVclust thermal response will further enable its use at physiological mammalian temperatures.
recommended culture temperature upper range 30 °C
Claim 53use constraintsupports2024Source 15needs review

BcLOVclust is currently best suited for cells and organisms cultured below approximately 30 °C rather than physiological mammalian temperatures.

While its usage is currently best suited in cells and organisms that can be cultured below ∼30 °C, a deeper understanding of BcLOVclust thermal response will further enable its use at physiological mammalian temperatures.
recommended culture temperature upper range 30 °C
Claim 54use constraintsupports2024Source 15needs review

BcLOVclust is currently best suited for cells and organisms cultured below approximately 30 °C rather than physiological mammalian temperatures.

While its usage is currently best suited in cells and organisms that can be cultured below ∼30 °C, a deeper understanding of BcLOVclust thermal response will further enable its use at physiological mammalian temperatures.
recommended culture temperature upper range 30 °C
Claim 55use constraintsupports2024Source 15needs review

BcLOVclust is currently best suited for cells and organisms cultured below approximately 30 °C rather than physiological mammalian temperatures.

While its usage is currently best suited in cells and organisms that can be cultured below ∼30 °C, a deeper understanding of BcLOVclust thermal response will further enable its use at physiological mammalian temperatures.
recommended culture temperature upper range 30 °C
Claim 56use constraintsupports2024Source 15needs review

BcLOVclust is currently best suited for cells and organisms cultured below approximately 30 °C rather than physiological mammalian temperatures.

While its usage is currently best suited in cells and organisms that can be cultured below ∼30 °C, a deeper understanding of BcLOVclust thermal response will further enable its use at physiological mammalian temperatures.
recommended culture temperature upper range 30 °C
Claim 57application constraintsupports2023Source 17needs review

Current use of BcLOVclust is suited for organisms that can be cultured below approximately 30 degrees Celsius.

While its usage is currently suited for organisms that can be cultured below ∼30 °C
temperature suitability threshold below ∼30 °C
Claim 58application constraintsupports2023Source 17needs review

Current use of BcLOVclust is suited for organisms that can be cultured below approximately 30 degrees Celsius.

While its usage is currently suited for organisms that can be cultured below ∼30 °C
temperature suitability threshold below ∼30 °C
Claim 59application constraintsupports2023Source 17needs review

Current use of BcLOVclust is suited for organisms that can be cultured below approximately 30 degrees Celsius.

While its usage is currently suited for organisms that can be cultured below ∼30 °C
temperature suitability threshold below ∼30 °C
Claim 60application constraintsupports2023Source 17needs review

Current use of BcLOVclust is suited for organisms that can be cultured below approximately 30 degrees Celsius.

While its usage is currently suited for organisms that can be cultured below ∼30 °C
temperature suitability threshold below ∼30 °C
Claim 61application constraintsupports2023Source 17needs review

Current use of BcLOVclust is suited for organisms that can be cultured below approximately 30 degrees Celsius.

While its usage is currently suited for organisms that can be cultured below ∼30 °C
temperature suitability threshold below ∼30 °C
Claim 62application constraintsupports2023Source 17needs review

Current use of BcLOVclust is suited for organisms that can be cultured below approximately 30 degrees Celsius.

While its usage is currently suited for organisms that can be cultured below ∼30 °C
temperature suitability threshold below ∼30 °C
Claim 63application constraintsupports2023Source 17needs review

Current use of BcLOVclust is suited for organisms that can be cultured below approximately 30 degrees Celsius.

While its usage is currently suited for organisms that can be cultured below ∼30 °C
temperature suitability threshold below ∼30 °C
Claim 64application scopesupports2023Source 17needs review

BcLOVclust can be used to control signaling proteins and stress granules in mammalian cells.

BcLOVclust could also be applied to control signaling proteins and stress granules in mammalian cells.
Claim 65application scopesupports2023Source 17needs review

BcLOVclust can be used to control signaling proteins and stress granules in mammalian cells.

BcLOVclust could also be applied to control signaling proteins and stress granules in mammalian cells.
Claim 66application scopesupports2023Source 17needs review

BcLOVclust can be used to control signaling proteins and stress granules in mammalian cells.

BcLOVclust could also be applied to control signaling proteins and stress granules in mammalian cells.
Claim 67application scopesupports2023Source 17needs review

BcLOVclust can be used to control signaling proteins and stress granules in mammalian cells.

BcLOVclust could also be applied to control signaling proteins and stress granules in mammalian cells.
Claim 68application scopesupports2023Source 17needs review

BcLOVclust can be used to control signaling proteins and stress granules in mammalian cells.

BcLOVclust could also be applied to control signaling proteins and stress granules in mammalian cells.
Claim 69application scopesupports2023Source 17needs review

BcLOVclust can be used to control signaling proteins and stress granules in mammalian cells.

BcLOVclust could also be applied to control signaling proteins and stress granules in mammalian cells.
Claim 70application scopesupports2023Source 17needs review

BcLOVclust can be used to control signaling proteins and stress granules in mammalian cells.

BcLOVclust could also be applied to control signaling proteins and stress granules in mammalian cells.
Claim 71benchmark comparisonsupports2023Source 10needs review

LAB maps E-cadherin-binding partners with higher accuracy and significantly fewer false positives than TurboID.

We show that LAB can map E-cadherin-binding partners with higher accuracy and significantly fewer false positives than TurboID.
Claim 72benchmark comparisonsupports2023Source 10needs review

LAB maps E-cadherin-binding partners with higher accuracy and significantly fewer false positives than TurboID.

We show that LAB can map E-cadherin-binding partners with higher accuracy and significantly fewer false positives than TurboID.
Claim 73benchmark comparisonsupports2023Source 10needs review

LAB maps E-cadherin-binding partners with higher accuracy and significantly fewer false positives than TurboID.

We show that LAB can map E-cadherin-binding partners with higher accuracy and significantly fewer false positives than TurboID.
Claim 74benchmark comparisonsupports2023Source 10needs review

LAB maps E-cadherin-binding partners with higher accuracy and significantly fewer false positives than TurboID.

We show that LAB can map E-cadherin-binding partners with higher accuracy and significantly fewer false positives than TurboID.
Claim 75benchmark comparisonsupports2023Source 10needs review

LAB maps E-cadherin-binding partners with higher accuracy and significantly fewer false positives than TurboID.

We show that LAB can map E-cadherin-binding partners with higher accuracy and significantly fewer false positives than TurboID.
Claim 76benchmark comparisonsupports2023Source 10needs review

LAB maps E-cadherin-binding partners with higher accuracy and significantly fewer false positives than TurboID.

We show that LAB can map E-cadherin-binding partners with higher accuracy and significantly fewer false positives than TurboID.
Claim 77biological rolesupports2023Source 22needs review

CRY2 is essential in regulating skeletal muscle repair.

Therefore, CRY2 is essential in regulating skeletal muscle repair.
Claim 78comparative performancesupports2023Source 17needs review

BcLOVclust has dramatically faster clustering and de-clustering kinetics than Cry2.

BcLOVclust, clustered over many cycles with dramatically faster clustering and de-clustering kinetics compared to Cry2
Claim 79comparative performancesupports2023Source 17needs review

BcLOVclust has dramatically faster clustering and de-clustering kinetics than Cry2.

BcLOVclust, clustered over many cycles with dramatically faster clustering and de-clustering kinetics compared to Cry2
Claim 80comparative performancesupports2023Source 17needs review

BcLOVclust has dramatically faster clustering and de-clustering kinetics than Cry2.

BcLOVclust, clustered over many cycles with dramatically faster clustering and de-clustering kinetics compared to Cry2
Claim 81comparative performancesupports2023Source 17needs review

BcLOVclust has dramatically faster clustering and de-clustering kinetics than Cry2.

BcLOVclust, clustered over many cycles with dramatically faster clustering and de-clustering kinetics compared to Cry2
Claim 82comparative performancesupports2023Source 17needs review

BcLOVclust has dramatically faster clustering and de-clustering kinetics than Cry2.

BcLOVclust, clustered over many cycles with dramatically faster clustering and de-clustering kinetics compared to Cry2
Claim 83comparative performancesupports2023Source 17needs review

BcLOVclust has dramatically faster clustering and de-clustering kinetics than Cry2.

BcLOVclust, clustered over many cycles with dramatically faster clustering and de-clustering kinetics compared to Cry2
Claim 84comparative performancesupports2023Source 17needs review

BcLOVclust has dramatically faster clustering and de-clustering kinetics than Cry2.

BcLOVclust, clustered over many cycles with dramatically faster clustering and de-clustering kinetics compared to Cry2
Claim 85construct architecturesupports2023Source 10needs review

LAB fuses the two halves of split-TurboID to the photodimeric proteins CRY2 and CIB1.

Our technology, called light-activated BioID (LAB), fuses the two halves of the split-TurboID proximity labeling enzyme to the photodimeric proteins CRY2 and CIB1.
Claim 86construct architecturesupports2023Source 10needs review

LAB fuses the two halves of split-TurboID to the photodimeric proteins CRY2 and CIB1.

Our technology, called light-activated BioID (LAB), fuses the two halves of the split-TurboID proximity labeling enzyme to the photodimeric proteins CRY2 and CIB1.
Claim 87construct architecturesupports2023Source 10needs review

LAB fuses the two halves of split-TurboID to the photodimeric proteins CRY2 and CIB1.

Our technology, called light-activated BioID (LAB), fuses the two halves of the split-TurboID proximity labeling enzyme to the photodimeric proteins CRY2 and CIB1.
Claim 88construct architecturesupports2023Source 10needs review

LAB fuses the two halves of split-TurboID to the photodimeric proteins CRY2 and CIB1.

Our technology, called light-activated BioID (LAB), fuses the two halves of the split-TurboID proximity labeling enzyme to the photodimeric proteins CRY2 and CIB1.
Claim 89construct architecturesupports2023Source 10needs review

LAB fuses the two halves of split-TurboID to the photodimeric proteins CRY2 and CIB1.

Our technology, called light-activated BioID (LAB), fuses the two halves of the split-TurboID proximity labeling enzyme to the photodimeric proteins CRY2 and CIB1.
Claim 90construct architecturesupports2023Source 10needs review

LAB fuses the two halves of split-TurboID to the photodimeric proteins CRY2 and CIB1.

Our technology, called light-activated BioID (LAB), fuses the two halves of the split-TurboID proximity labeling enzyme to the photodimeric proteins CRY2 and CIB1.
Claim 91construct architecturesupports2023Source 10needs review

LAB fuses the two halves of split-TurboID to the photodimeric proteins CRY2 and CIB1.

Our technology, called light-activated BioID (LAB), fuses the two halves of the split-TurboID proximity labeling enzyme to the photodimeric proteins CRY2 and CIB1.
Claim 92degradation pathwaysupports2023Source 9needs review

Wild-type CRY2 and the CRY2 variant are degraded by a lysosomal-mediated degradation pathway.

Further studies revealed that wild-type and CRY2 variants are degraded by the lysosomal-mediated degradation pathway, a mechanism not previously associated with CRY2.
Claim 93engineering resultsupports2023Source 17needs review

A BcLOV4 variant was engineered that clusters in the cytoplasm and does not associate with the membrane in response to blue light.

allowing us to engineer a variant of BcLOV4 that clusters in the cytoplasm and does not associate with the membrane in response to blue light
Claim 94engineering resultsupports2023Source 17needs review

A BcLOV4 variant was engineered that clusters in the cytoplasm and does not associate with the membrane in response to blue light.

allowing us to engineer a variant of BcLOV4 that clusters in the cytoplasm and does not associate with the membrane in response to blue light
Claim 95engineering resultsupports2023Source 17needs review

A BcLOV4 variant was engineered that clusters in the cytoplasm and does not associate with the membrane in response to blue light.

allowing us to engineer a variant of BcLOV4 that clusters in the cytoplasm and does not associate with the membrane in response to blue light
Claim 96engineering resultsupports2023Source 17needs review

A BcLOV4 variant was engineered that clusters in the cytoplasm and does not associate with the membrane in response to blue light.

allowing us to engineer a variant of BcLOV4 that clusters in the cytoplasm and does not associate with the membrane in response to blue light
Claim 97engineering resultsupports2023Source 17needs review

A BcLOV4 variant was engineered that clusters in the cytoplasm and does not associate with the membrane in response to blue light.

allowing us to engineer a variant of BcLOV4 that clusters in the cytoplasm and does not associate with the membrane in response to blue light
Claim 98engineering resultsupports2023Source 17needs review

A BcLOV4 variant was engineered that clusters in the cytoplasm and does not associate with the membrane in response to blue light.

allowing us to engineer a variant of BcLOV4 that clusters in the cytoplasm and does not associate with the membrane in response to blue light
Claim 99engineering resultsupports2023Source 17needs review

A BcLOV4 variant was engineered that clusters in the cytoplasm and does not associate with the membrane in response to blue light.

allowing us to engineer a variant of BcLOV4 that clusters in the cytoplasm and does not associate with the membrane in response to blue light
Claim 100expression regulationsupports2023Source 22needs review

Loss of CRY2 increases the number of PAX7-positive cells associated with myotubes, suggesting increased reserve cell production.

Immunostaining revealed that the number of mononucleated paired box protein 7 (PAX7+) cells associated with myotubes formed by CRY2-/- cells was increased compared with CRY2+/+ cells, suggesting that more reserve cells were produced in the absence of CRY2.
Claim 101functional effectsupports2023Source 23needs review

Arabidopsis cryptochrome 2 is employed for optogenetic induction of caspase-8-mediated apoptosis.

Claim 102functional effectsupports2023Source 22needs review

CRY2-deficient myoblasts survive better in ischemic muscle.

CRY2 deficient myoblasts survived better in ischemic muscle.
Claim 103functional effectsupports2023Source 22needs review

Deletion of CRY2 enhances muscle regeneration.

Using the skeletal muscle lineage and satellite cell-specific CRY2 knockout mice (CRY2scko), we show that the deletion of CRY2 enhances muscle regeneration.
Claim 104functional effectsupports2023Source 22needs review

Deletion of CRY2 stimulates myoblast proliferation.

Single myofiber analysis revealed that deletion of CRY2 stimulates the proliferation of myoblasts.
Claim 105functional effectsupports2023Source 22needs review

Loss of CRY2 enhances myoblast differentiation, evidenced by increased MyHC expression and myotube formation.

The differentiation potential of myoblasts was enhanced by the loss of CRY2 evidenced by increased expression of myosin heavy chain (MyHC) and myotube formation in CRY2-/- cells versus CRY2+/+ cells.
Claim 106mechanismsupports2023Source 22needs review

Loss of CRY2 activates ERK1/2 signaling and ETS1, and ETS1 binds the PAX7 promoter to induce PAX7 transcription.

Loss of CRY2 leads to the activation of the ERK1/2 signaling pathway and ETS1, which binds to the promoter of PAX7 to induce its transcription.
Claim 107mechanismsupports2023Source 9needs review

Ser-420 of CRY2 is required for interaction with the E3 ligases FBXL3 and FBXL21.

which suggests Ser-420 of CRY2 is required for the interaction with E3 ligases
Claim 108mechanism of actionsupports2023Source 10needs review

Upon blue light illumination, CRY2 and CIB1 dimerize, reconstitute split-TurboID, and initiate biotinylation.

upon illumination with blue light, CRY2 and CIB1 dimerize, reconstitute split-TurboID and initiate biotinylation
Claim 109mechanism of actionsupports2023Source 10needs review

Upon blue light illumination, CRY2 and CIB1 dimerize, reconstitute split-TurboID, and initiate biotinylation.

upon illumination with blue light, CRY2 and CIB1 dimerize, reconstitute split-TurboID and initiate biotinylation
Claim 110mechanism of actionsupports2023Source 10needs review

Upon blue light illumination, CRY2 and CIB1 dimerize, reconstitute split-TurboID, and initiate biotinylation.

upon illumination with blue light, CRY2 and CIB1 dimerize, reconstitute split-TurboID and initiate biotinylation
Claim 111mechanism of actionsupports2023Source 10needs review

Upon blue light illumination, CRY2 and CIB1 dimerize, reconstitute split-TurboID, and initiate biotinylation.

upon illumination with blue light, CRY2 and CIB1 dimerize, reconstitute split-TurboID and initiate biotinylation
Claim 112mechanism of actionsupports2023Source 10needs review

Upon blue light illumination, CRY2 and CIB1 dimerize, reconstitute split-TurboID, and initiate biotinylation.

upon illumination with blue light, CRY2 and CIB1 dimerize, reconstitute split-TurboID and initiate biotinylation
Claim 113mechanism of actionsupports2023Source 10needs review

Upon blue light illumination, CRY2 and CIB1 dimerize, reconstitute split-TurboID, and initiate biotinylation.

upon illumination with blue light, CRY2 and CIB1 dimerize, reconstitute split-TurboID and initiate biotinylation
Claim 114mechanism of actionsupports2023Source 10needs review

Upon blue light illumination, CRY2 and CIB1 dimerize, reconstitute split-TurboID, and initiate biotinylation.

upon illumination with blue light, CRY2 and CIB1 dimerize, reconstitute split-TurboID and initiate biotinylation
Claim 115modulation strategysupports2023Source 17needs review

BcLOVclust clustering magnitude can be increased by appending a FUS intrinsically disordered region or by optimizing the fused fluorescent protein.

The magnitude of BcLOVclust clustering could be strengthened by appending an intrinsically disordered region from the fused in sarcoma (FUS) protein, or by optimizing the fluorescent protein to which it was fused.
Claim 116modulation strategysupports2023Source 17needs review

BcLOVclust clustering magnitude can be increased by appending a FUS intrinsically disordered region or by optimizing the fused fluorescent protein.

The magnitude of BcLOVclust clustering could be strengthened by appending an intrinsically disordered region from the fused in sarcoma (FUS) protein, or by optimizing the fluorescent protein to which it was fused.
Claim 117modulation strategysupports2023Source 17needs review

BcLOVclust clustering magnitude can be increased by appending a FUS intrinsically disordered region or by optimizing the fused fluorescent protein.

The magnitude of BcLOVclust clustering could be strengthened by appending an intrinsically disordered region from the fused in sarcoma (FUS) protein, or by optimizing the fluorescent protein to which it was fused.
Claim 118modulation strategysupports2023Source 17needs review

BcLOVclust clustering magnitude can be increased by appending a FUS intrinsically disordered region or by optimizing the fused fluorescent protein.

The magnitude of BcLOVclust clustering could be strengthened by appending an intrinsically disordered region from the fused in sarcoma (FUS) protein, or by optimizing the fluorescent protein to which it was fused.
Claim 119modulation strategysupports2023Source 17needs review

BcLOVclust clustering magnitude can be increased by appending a FUS intrinsically disordered region or by optimizing the fused fluorescent protein.

The magnitude of BcLOVclust clustering could be strengthened by appending an intrinsically disordered region from the fused in sarcoma (FUS) protein, or by optimizing the fluorescent protein to which it was fused.
Claim 120modulation strategysupports2023Source 17needs review

BcLOVclust clustering magnitude can be increased by appending a FUS intrinsically disordered region or by optimizing the fused fluorescent protein.

The magnitude of BcLOVclust clustering could be strengthened by appending an intrinsically disordered region from the fused in sarcoma (FUS) protein, or by optimizing the fluorescent protein to which it was fused.
Claim 121modulation strategysupports2023Source 17needs review

BcLOVclust clustering magnitude can be increased by appending a FUS intrinsically disordered region or by optimizing the fused fluorescent protein.

The magnitude of BcLOVclust clustering could be strengthened by appending an intrinsically disordered region from the fused in sarcoma (FUS) protein, or by optimizing the fluorescent protein to which it was fused.
Claim 122multiplexing capabilitysupports2023Source 17needs review

At low temperatures, BcLOVclust and Cry2 can be multiplexed in the same cells to independently control protein condensates.

At low temperatures, BcLOVclust and Cry2 could be multiplexed in the same cells, allowing light control of independent protein condensates.
Claim 123multiplexing capabilitysupports2023Source 17needs review

At low temperatures, BcLOVclust and Cry2 can be multiplexed in the same cells to independently control protein condensates.

At low temperatures, BcLOVclust and Cry2 could be multiplexed in the same cells, allowing light control of independent protein condensates.
Claim 124multiplexing capabilitysupports2023Source 17needs review

At low temperatures, BcLOVclust and Cry2 can be multiplexed in the same cells to independently control protein condensates.

At low temperatures, BcLOVclust and Cry2 could be multiplexed in the same cells, allowing light control of independent protein condensates.
Claim 125multiplexing capabilitysupports2023Source 17needs review

At low temperatures, BcLOVclust and Cry2 can be multiplexed in the same cells to independently control protein condensates.

At low temperatures, BcLOVclust and Cry2 could be multiplexed in the same cells, allowing light control of independent protein condensates.
Claim 126multiplexing capabilitysupports2023Source 17needs review

At low temperatures, BcLOVclust and Cry2 can be multiplexed in the same cells to independently control protein condensates.

At low temperatures, BcLOVclust and Cry2 could be multiplexed in the same cells, allowing light control of independent protein condensates.
Claim 127multiplexing capabilitysupports2023Source 17needs review

At low temperatures, BcLOVclust and Cry2 can be multiplexed in the same cells to independently control protein condensates.

At low temperatures, BcLOVclust and Cry2 could be multiplexed in the same cells, allowing light control of independent protein condensates.
Claim 128multiplexing capabilitysupports2023Source 17needs review

At low temperatures, BcLOVclust and Cry2 can be multiplexed in the same cells to independently control protein condensates.

At low temperatures, BcLOVclust and Cry2 could be multiplexed in the same cells, allowing light control of independent protein condensates.
Claim 129reversibilitysupports2023Source 10needs review

Turning off the light causes CRY2 and CIB1 to dissociate and halts biotinylation.

Turning off the light leads to the dissociation of CRY2 and CIB1 and halts biotinylation.
Claim 130reversibilitysupports2023Source 10needs review

Turning off the light causes CRY2 and CIB1 to dissociate and halts biotinylation.

Turning off the light leads to the dissociation of CRY2 and CIB1 and halts biotinylation.
Claim 131reversibilitysupports2023Source 10needs review

Turning off the light causes CRY2 and CIB1 to dissociate and halts biotinylation.

Turning off the light leads to the dissociation of CRY2 and CIB1 and halts biotinylation.
Claim 132reversibilitysupports2023Source 10needs review

Turning off the light causes CRY2 and CIB1 to dissociate and halts biotinylation.

Turning off the light leads to the dissociation of CRY2 and CIB1 and halts biotinylation.
Claim 133reversibilitysupports2023Source 10needs review

Turning off the light causes CRY2 and CIB1 to dissociate and halts biotinylation.

Turning off the light leads to the dissociation of CRY2 and CIB1 and halts biotinylation.
Claim 134reversibilitysupports2023Source 10needs review

Turning off the light causes CRY2 and CIB1 to dissociate and halts biotinylation.

Turning off the light leads to the dissociation of CRY2 and CIB1 and halts biotinylation.
Claim 135reversibilitysupports2023Source 10needs review

Turning off the light causes CRY2 and CIB1 to dissociate and halts biotinylation.

Turning off the light leads to the dissociation of CRY2 and CIB1 and halts biotinylation.
Claim 136temperature responsesupports2023Source 17needs review

BcLOVclust retains temperature sensitivity such that light-induced clustering is transient and spontaneous declustering increases with temperature.

BcLOVclust retained the temperature sensitivity of BcLOV4 such that light induced clustering was transient, and the rate of spontaneous declustering increased with temperature.
Claim 137temperature responsesupports2023Source 17needs review

BcLOVclust retains temperature sensitivity such that light-induced clustering is transient and spontaneous declustering increases with temperature.

BcLOVclust retained the temperature sensitivity of BcLOV4 such that light induced clustering was transient, and the rate of spontaneous declustering increased with temperature.
Claim 138temperature responsesupports2023Source 17needs review

BcLOVclust retains temperature sensitivity such that light-induced clustering is transient and spontaneous declustering increases with temperature.

BcLOVclust retained the temperature sensitivity of BcLOV4 such that light induced clustering was transient, and the rate of spontaneous declustering increased with temperature.
Claim 139temperature responsesupports2023Source 17needs review

BcLOVclust retains temperature sensitivity such that light-induced clustering is transient and spontaneous declustering increases with temperature.

BcLOVclust retained the temperature sensitivity of BcLOV4 such that light induced clustering was transient, and the rate of spontaneous declustering increased with temperature.
Claim 140temperature responsesupports2023Source 17needs review

BcLOVclust retains temperature sensitivity such that light-induced clustering is transient and spontaneous declustering increases with temperature.

BcLOVclust retained the temperature sensitivity of BcLOV4 such that light induced clustering was transient, and the rate of spontaneous declustering increased with temperature.
Claim 141temperature responsesupports2023Source 17needs review

BcLOVclust retains temperature sensitivity such that light-induced clustering is transient and spontaneous declustering increases with temperature.

BcLOVclust retained the temperature sensitivity of BcLOV4 such that light induced clustering was transient, and the rate of spontaneous declustering increased with temperature.
Claim 142temperature responsesupports2023Source 17needs review

BcLOVclust retains temperature sensitivity such that light-induced clustering is transient and spontaneous declustering increases with temperature.

BcLOVclust retained the temperature sensitivity of BcLOV4 such that light induced clustering was transient, and the rate of spontaneous declustering increased with temperature.
Claim 143tool descriptionsupports2023Source 10needs review

Light-activated BioID is a light-activated proximity labeling technology for mapping protein-protein interactions at the cell membrane with high accuracy and precision.

Here, we present a light-activated proximity labeling technology for mapping protein-protein interactions at the cell membrane with high accuracy and precision.
Claim 144tool descriptionsupports2023Source 10needs review

Light-activated BioID is a light-activated proximity labeling technology for mapping protein-protein interactions at the cell membrane with high accuracy and precision.

Here, we present a light-activated proximity labeling technology for mapping protein-protein interactions at the cell membrane with high accuracy and precision.
Claim 145tool descriptionsupports2023Source 10needs review

Light-activated BioID is a light-activated proximity labeling technology for mapping protein-protein interactions at the cell membrane with high accuracy and precision.

Here, we present a light-activated proximity labeling technology for mapping protein-protein interactions at the cell membrane with high accuracy and precision.
Claim 146tool descriptionsupports2023Source 10needs review

Light-activated BioID is a light-activated proximity labeling technology for mapping protein-protein interactions at the cell membrane with high accuracy and precision.

Here, we present a light-activated proximity labeling technology for mapping protein-protein interactions at the cell membrane with high accuracy and precision.
Claim 147tool descriptionsupports2023Source 10needs review

Light-activated BioID is a light-activated proximity labeling technology for mapping protein-protein interactions at the cell membrane with high accuracy and precision.

Here, we present a light-activated proximity labeling technology for mapping protein-protein interactions at the cell membrane with high accuracy and precision.
Claim 148tool descriptionsupports2023Source 10needs review

Light-activated BioID is a light-activated proximity labeling technology for mapping protein-protein interactions at the cell membrane with high accuracy and precision.

Here, we present a light-activated proximity labeling technology for mapping protein-protein interactions at the cell membrane with high accuracy and precision.
Claim 149anticipated generalizabilityneutral2022Source 1needs review

The authors anticipate that the approach can be utilized for other PKC isoforms to provide a reliable and direct stimulus for targeted membrane protein phosphorylation.

We anticipate that this approach can be utilized for other PKC isoforms to provide a reliable and direct stimulus for targeted membrane protein phosphorylation by the relevant PKCs.
Claim 150anticipated generalizabilityneutral2022Source 1needs review

The authors anticipate that the approach can be utilized for other PKC isoforms to provide a reliable and direct stimulus for targeted membrane protein phosphorylation.

We anticipate that this approach can be utilized for other PKC isoforms to provide a reliable and direct stimulus for targeted membrane protein phosphorylation by the relevant PKCs.
Claim 151anticipated generalizabilityneutral2022Source 1needs review

The authors anticipate that the approach can be utilized for other PKC isoforms to provide a reliable and direct stimulus for targeted membrane protein phosphorylation.

We anticipate that this approach can be utilized for other PKC isoforms to provide a reliable and direct stimulus for targeted membrane protein phosphorylation by the relevant PKCs.
Claim 152anticipated generalizabilityneutral2022Source 1needs review

The authors anticipate that the approach can be utilized for other PKC isoforms to provide a reliable and direct stimulus for targeted membrane protein phosphorylation.

We anticipate that this approach can be utilized for other PKC isoforms to provide a reliable and direct stimulus for targeted membrane protein phosphorylation by the relevant PKCs.
Claim 153anticipated generalizabilityneutral2022Source 1needs review

The authors anticipate that the approach can be utilized for other PKC isoforms to provide a reliable and direct stimulus for targeted membrane protein phosphorylation.

We anticipate that this approach can be utilized for other PKC isoforms to provide a reliable and direct stimulus for targeted membrane protein phosphorylation by the relevant PKCs.
Claim 154anticipated generalizabilityneutral2022Source 1needs review

The authors anticipate that the approach can be utilized for other PKC isoforms to provide a reliable and direct stimulus for targeted membrane protein phosphorylation.

We anticipate that this approach can be utilized for other PKC isoforms to provide a reliable and direct stimulus for targeted membrane protein phosphorylation by the relevant PKCs.
Claim 155anticipated generalizabilityneutral2022Source 1needs review

The authors anticipate that the approach can be utilized for other PKC isoforms to provide a reliable and direct stimulus for targeted membrane protein phosphorylation.

We anticipate that this approach can be utilized for other PKC isoforms to provide a reliable and direct stimulus for targeted membrane protein phosphorylation by the relevant PKCs.
Claim 156application resultsupports2022Source 1needs review

Using PKCε in this optogenetic system leads to robust activation of GIRK1/4 potassium channels.

We demonstrate this system using PKCε and show that this leads to robust activation of a K+ channel (G protein-gated inwardly rectifying K+ channels 1 and 4)
Claim 157application resultsupports2022Source 1needs review

Using PKCε in this optogenetic system leads to robust activation of GIRK1/4 potassium channels.

We demonstrate this system using PKCε and show that this leads to robust activation of a K+ channel (G protein-gated inwardly rectifying K+ channels 1 and 4)
Claim 158application resultsupports2022Source 1needs review

Using PKCε in this optogenetic system leads to robust activation of GIRK1/4 potassium channels.

We demonstrate this system using PKCε and show that this leads to robust activation of a K+ channel (G protein-gated inwardly rectifying K+ channels 1 and 4)
Claim 159application resultsupports2022Source 1needs review

Using PKCε in this optogenetic system leads to robust activation of GIRK1/4 potassium channels.

We demonstrate this system using PKCε and show that this leads to robust activation of a K+ channel (G protein-gated inwardly rectifying K+ channels 1 and 4)
Claim 160application resultsupports2022Source 1needs review

Using PKCε in this optogenetic system leads to robust activation of GIRK1/4 potassium channels.

We demonstrate this system using PKCε and show that this leads to robust activation of a K+ channel (G protein-gated inwardly rectifying K+ channels 1 and 4)
Claim 161application resultsupports2022Source 1needs review

Using PKCε in this optogenetic system leads to robust activation of GIRK1/4 potassium channels.

We demonstrate this system using PKCε and show that this leads to robust activation of a K+ channel (G protein-gated inwardly rectifying K+ channels 1 and 4)
Claim 162application resultsupports2022Source 1needs review

Using PKCε in this optogenetic system leads to robust activation of GIRK1/4 potassium channels.

We demonstrate this system using PKCε and show that this leads to robust activation of a K+ channel (G protein-gated inwardly rectifying K+ channels 1 and 4)
Claim 163benchmark scopesupports2022Source 16needs review

optoSynC was benchmarked in Caenorhabditis elegans, zebrafish, and murine hippocampal neurons.

We benchmark this tool, optoSynC, in Caenorhabditis elegans, zebrafish, and murine hippocampal neurons.
Claim 164benchmark scopesupports2022Source 16needs review

optoSynC was benchmarked in Caenorhabditis elegans, zebrafish, and murine hippocampal neurons.

We benchmark this tool, optoSynC, in Caenorhabditis elegans, zebrafish, and murine hippocampal neurons.
Claim 165benchmark scopesupports2022Source 16needs review

optoSynC was benchmarked in Caenorhabditis elegans, zebrafish, and murine hippocampal neurons.

We benchmark this tool, optoSynC, in Caenorhabditis elegans, zebrafish, and murine hippocampal neurons.
Claim 166benchmark scopesupports2022Source 16needs review

optoSynC was benchmarked in Caenorhabditis elegans, zebrafish, and murine hippocampal neurons.

We benchmark this tool, optoSynC, in Caenorhabditis elegans, zebrafish, and murine hippocampal neurons.
Claim 167benchmark scopesupports2022Source 16needs review

optoSynC was benchmarked in Caenorhabditis elegans, zebrafish, and murine hippocampal neurons.

We benchmark this tool, optoSynC, in Caenorhabditis elegans, zebrafish, and murine hippocampal neurons.
Claim 168benchmark scopesupports2022Source 16needs review

optoSynC was benchmarked in Caenorhabditis elegans, zebrafish, and murine hippocampal neurons.

We benchmark this tool, optoSynC, in Caenorhabditis elegans, zebrafish, and murine hippocampal neurons.
Claim 169benchmark scopesupports2022Source 16needs review

optoSynC was benchmarked in Caenorhabditis elegans, zebrafish, and murine hippocampal neurons.

We benchmark this tool, optoSynC, in Caenorhabditis elegans, zebrafish, and murine hippocampal neurons.
Claim 170classificationsupports2022Source 16needs review

optoSynC is a highly efficient non-ionic optogenetic silencer.

optoSynC is a highly efficient, ‘non-ionic’ optogenetic silencer
Claim 171classificationsupports2022Source 16needs review

optoSynC is a highly efficient non-ionic optogenetic silencer.

optoSynC is a highly efficient, ‘non-ionic’ optogenetic silencer
Claim 172classificationsupports2022Source 16needs review

optoSynC is a highly efficient non-ionic optogenetic silencer.

optoSynC is a highly efficient, ‘non-ionic’ optogenetic silencer
Claim 173classificationsupports2022Source 16needs review

optoSynC is a highly efficient non-ionic optogenetic silencer.

optoSynC is a highly efficient, ‘non-ionic’ optogenetic silencer
Claim 174classificationsupports2022Source 16needs review

optoSynC is a highly efficient non-ionic optogenetic silencer.

optoSynC is a highly efficient, ‘non-ionic’ optogenetic silencer
Claim 175classificationsupports2022Source 16needs review

optoSynC is a highly efficient non-ionic optogenetic silencer.

optoSynC is a highly efficient, ‘non-ionic’ optogenetic silencer
Claim 176classificationsupports2022Source 16needs review

optoSynC is a highly efficient non-ionic optogenetic silencer.

optoSynC is a highly efficient, ‘non-ionic’ optogenetic silencer
Claim 177compositionsupports2022Source 24needs review

LAB is generated by fusing split-TurboID halves to the photodimeric proteins CRY2 and CIB1.

Our system, called Light Activated BioID (LAB), is generated by fusing the two halves of the split-TurboID proximity labeling enzyme to the photodimeric proteins CRY2 and CIB1.
Claim 178functional effectsupports2022Source 16needs review

optoSynC can inhibit exocytosis for several hours at very low light intensities.

optoSynC can inhibit exocytosis for several hours, at very low light intensities
duration of exocytosis inhibition several hourslight intensity requirement very low light intensities
Claim 179functional effectsupports2022Source 16needs review

optoSynC can inhibit exocytosis for several hours at very low light intensities.

optoSynC can inhibit exocytosis for several hours, at very low light intensities
duration of exocytosis inhibition several hourslight intensity requirement very low light intensities
Claim 180functional effectsupports2022Source 16needs review

optoSynC can inhibit exocytosis for several hours at very low light intensities.

optoSynC can inhibit exocytosis for several hours, at very low light intensities
duration of exocytosis inhibition several hourslight intensity requirement very low light intensities
Claim 181functional effectsupports2022Source 16needs review

optoSynC can inhibit exocytosis for several hours at very low light intensities.

optoSynC can inhibit exocytosis for several hours, at very low light intensities
duration of exocytosis inhibition several hourslight intensity requirement very low light intensities
Claim 182functional effectsupports2022Source 16needs review

optoSynC can inhibit exocytosis for several hours at very low light intensities.

optoSynC can inhibit exocytosis for several hours, at very low light intensities
duration of exocytosis inhibition several hourslight intensity requirement very low light intensities
Claim 183functional effectsupports2022Source 16needs review

optoSynC can inhibit exocytosis for several hours at very low light intensities.

optoSynC can inhibit exocytosis for several hours, at very low light intensities
duration of exocytosis inhibition several hourslight intensity requirement very low light intensities
Claim 184functional effectsupports2022Source 16needs review

optoSynC can inhibit exocytosis for several hours at very low light intensities.

optoSynC can inhibit exocytosis for several hours, at very low light intensities
duration of exocytosis inhibition several hourslight intensity requirement very low light intensities
Claim 185functional rolesupports2022Source 18needs review

Arabidopsis cryptochromes are blue light photoreceptors that regulate plant growth, development, and metabolism.

Cryptochromes (CRYs) are blue light photoreceptors that regulate growth, development, and metabolism in plants.
Claim 186interaction mechanismsupports2022Source 18needs review

Both the N-terminal and C-terminal domains of Arabidopsis cryptochromes participate in light-induced interactions with multiple signaling proteins including the COP1/SPA E3 ubiquitin ligase.

Both the N- and C-terminal domains of CRYs participate in light-induced interaction with multiple signaling proteins. These include the COP1/SPA E3 ubiquitin ligase...
Claim 187kineticssupports2022Source 16needs review

optoSynC-induced locomotion silencing occurs with tau_on of about 7.2 seconds and recovery after light-off with tau_off of about 6.5 minutes.

Locomotion silencing occurs with tauon ~7.2 s and recovers with tauoff ~6.5 min after light-off.
tau off 6.5 mintau on 7.2 s
Claim 188kineticssupports2022Source 16needs review

optoSynC-induced locomotion silencing occurs with tau_on of about 7.2 seconds and recovery after light-off with tau_off of about 6.5 minutes.

Locomotion silencing occurs with tauon ~7.2 s and recovers with tauoff ~6.5 min after light-off.
tau off 6.5 mintau on 7.2 s
Claim 189kineticssupports2022Source 16needs review

optoSynC-induced locomotion silencing occurs with tau_on of about 7.2 seconds and recovery after light-off with tau_off of about 6.5 minutes.

Locomotion silencing occurs with tauon ~7.2 s and recovers with tauoff ~6.5 min after light-off.
tau off 6.5 mintau on 7.2 s
Claim 190kineticssupports2022Source 16needs review

optoSynC-induced locomotion silencing occurs with tau_on of about 7.2 seconds and recovery after light-off with tau_off of about 6.5 minutes.

Locomotion silencing occurs with tauon ~7.2 s and recovers with tauoff ~6.5 min after light-off.
tau off 6.5 mintau on 7.2 s
Claim 191kineticssupports2022Source 16needs review

optoSynC-induced locomotion silencing occurs with tau_on of about 7.2 seconds and recovery after light-off with tau_off of about 6.5 minutes.

Locomotion silencing occurs with tauon ~7.2 s and recovers with tauoff ~6.5 min after light-off.
tau off 6.5 mintau on 7.2 s
Claim 192kineticssupports2022Source 16needs review

optoSynC-induced locomotion silencing occurs with tau_on of about 7.2 seconds and recovery after light-off with tau_off of about 6.5 minutes.

Locomotion silencing occurs with tauon ~7.2 s and recovers with tauoff ~6.5 min after light-off.
tau off 6.5 mintau on 7.2 s
Claim 193kineticssupports2022Source 16needs review

optoSynC-induced locomotion silencing occurs with tau_on of about 7.2 seconds and recovery after light-off with tau_off of about 6.5 minutes.

Locomotion silencing occurs with tauon ~7.2 s and recovers with tauoff ~6.5 min after light-off.
tau off 6.5 mintau on 7.2 s
Claim 194mechanismsupports2022Source 24needs review

Blue light exposure causes CRY2 and CIB1 to dimerize, reconstitute split-TurboID, and biotinylate proximate proteins in the LAB system.

upon exposure to blue light, CRY2 and CIB1 dimerize, reconstitute the split-TurboID enzyme, and biotinylate proximate proteins
Claim 195mechanismsupports2022Source 16needs review

optoSynC uses light-evoked homo-oligomerization of CRY2 to silence synaptic transmission by clustering synaptic vesicles.

Here, we use light-evoked homo-oligomerization of cryptochrome CRY2 to silence synaptic transmission, by clustering synaptic vesicles (SVs).
Claim 196mechanismsupports2022Source 16needs review

optoSynC uses light-evoked homo-oligomerization of CRY2 to silence synaptic transmission by clustering synaptic vesicles.

Here, we use light-evoked homo-oligomerization of cryptochrome CRY2 to silence synaptic transmission, by clustering synaptic vesicles (SVs).
Claim 197mechanismsupports2022Source 16needs review

optoSynC uses light-evoked homo-oligomerization of CRY2 to silence synaptic transmission by clustering synaptic vesicles.

Here, we use light-evoked homo-oligomerization of cryptochrome CRY2 to silence synaptic transmission, by clustering synaptic vesicles (SVs).
Claim 198mechanismsupports2022Source 16needs review

optoSynC uses light-evoked homo-oligomerization of CRY2 to silence synaptic transmission by clustering synaptic vesicles.

Here, we use light-evoked homo-oligomerization of cryptochrome CRY2 to silence synaptic transmission, by clustering synaptic vesicles (SVs).
Claim 199mechanismsupports2022Source 16needs review

optoSynC uses light-evoked homo-oligomerization of CRY2 to silence synaptic transmission by clustering synaptic vesicles.

Here, we use light-evoked homo-oligomerization of cryptochrome CRY2 to silence synaptic transmission, by clustering synaptic vesicles (SVs).
Claim 200mechanismsupports2022Source 16needs review

optoSynC uses light-evoked homo-oligomerization of CRY2 to silence synaptic transmission by clustering synaptic vesicles.

Here, we use light-evoked homo-oligomerization of cryptochrome CRY2 to silence synaptic transmission, by clustering synaptic vesicles (SVs).
Claim 201mechanismsupports2022Source 16needs review

optoSynC uses light-evoked homo-oligomerization of CRY2 to silence synaptic transmission by clustering synaptic vesicles.

Here, we use light-evoked homo-oligomerization of cryptochrome CRY2 to silence synaptic transmission, by clustering synaptic vesicles (SVs).
Claim 202mechanismsupports2022Source 16needs review

optoSynC uses light-evoked homo-oligomerization of cryptochrome CRY2 to silence synaptic transmission by clustering synaptic vesicles.

Here, we use light-evoked homo-oligomerization of cryptochrome CRY2 to silence synaptic transmission, by clustering synaptic vesicles (SVs).
Claim 203mechanismsupports2022Source 16needs review

optoSynC uses light-evoked homo-oligomerization of cryptochrome CRY2 to silence synaptic transmission by clustering synaptic vesicles.

Here, we use light-evoked homo-oligomerization of cryptochrome CRY2 to silence synaptic transmission, by clustering synaptic vesicles (SVs).
Claim 204mechanismsupports2022Source 16needs review

optoSynC uses light-evoked homo-oligomerization of cryptochrome CRY2 to silence synaptic transmission by clustering synaptic vesicles.

Here, we use light-evoked homo-oligomerization of cryptochrome CRY2 to silence synaptic transmission, by clustering synaptic vesicles (SVs).
Claim 205mechanismsupports2022Source 16needs review

optoSynC uses light-evoked homo-oligomerization of cryptochrome CRY2 to silence synaptic transmission by clustering synaptic vesicles.

Here, we use light-evoked homo-oligomerization of cryptochrome CRY2 to silence synaptic transmission, by clustering synaptic vesicles (SVs).
Claim 206mechanismsupports2022Source 16needs review

optoSynC uses light-evoked homo-oligomerization of cryptochrome CRY2 to silence synaptic transmission by clustering synaptic vesicles.

Here, we use light-evoked homo-oligomerization of cryptochrome CRY2 to silence synaptic transmission, by clustering synaptic vesicles (SVs).
Claim 207mechanismsupports2022Source 16needs review

optoSynC uses light-evoked homo-oligomerization of cryptochrome CRY2 to silence synaptic transmission by clustering synaptic vesicles.

Here, we use light-evoked homo-oligomerization of cryptochrome CRY2 to silence synaptic transmission, by clustering synaptic vesicles (SVs).
Claim 208mechanismsupports2022Source 16needs review

optoSynC uses light-evoked homo-oligomerization of cryptochrome CRY2 to silence synaptic transmission by clustering synaptic vesicles.

Here, we use light-evoked homo-oligomerization of cryptochrome CRY2 to silence synaptic transmission, by clustering synaptic vesicles (SVs).
Claim 209mechanismsupports2022Source 18needs review

Upon blue light exposure, inactive monomeric Arabidopsis cryptochromes undergo phosphorylation and oligomerization that are crucial to cryptochrome function.

Upon exposure to blue light, the monomeric inactive CRYs undergo phosphorylation and oligomerization, which are crucial to CRY function.
Claim 210mechanism of actionsupports2022Source 1needs review

Tagging CRY2 with the catalytic domain of PKC isozymes efficiently promotes translocation to the cell surface upon blue light exposure.

We show that tagging CRY2 with the catalytic domain of PKC isozymes can efficiently promote its translocation to the cell surface upon blue light exposure.
Claim 211mechanism of actionsupports2022Source 1needs review

Tagging CRY2 with the catalytic domain of PKC isozymes efficiently promotes translocation to the cell surface upon blue light exposure.

We show that tagging CRY2 with the catalytic domain of PKC isozymes can efficiently promote its translocation to the cell surface upon blue light exposure.
Claim 212mechanism of actionsupports2022Source 1needs review

Tagging CRY2 with the catalytic domain of PKC isozymes efficiently promotes translocation to the cell surface upon blue light exposure.

We show that tagging CRY2 with the catalytic domain of PKC isozymes can efficiently promote its translocation to the cell surface upon blue light exposure.
Claim 213mechanism of actionsupports2022Source 1needs review

Tagging CRY2 with the catalytic domain of PKC isozymes efficiently promotes translocation to the cell surface upon blue light exposure.

We show that tagging CRY2 with the catalytic domain of PKC isozymes can efficiently promote its translocation to the cell surface upon blue light exposure.
Claim 214mechanism of actionsupports2022Source 1needs review

Tagging CRY2 with the catalytic domain of PKC isozymes efficiently promotes translocation to the cell surface upon blue light exposure.

We show that tagging CRY2 with the catalytic domain of PKC isozymes can efficiently promote its translocation to the cell surface upon blue light exposure.
Claim 215mechanism of actionsupports2022Source 1needs review

Tagging CRY2 with the catalytic domain of PKC isozymes efficiently promotes translocation to the cell surface upon blue light exposure.

We show that tagging CRY2 with the catalytic domain of PKC isozymes can efficiently promote its translocation to the cell surface upon blue light exposure.
Claim 216mechanism of actionsupports2022Source 1needs review

Tagging CRY2 with the catalytic domain of PKC isozymes efficiently promotes translocation to the cell surface upon blue light exposure.

We show that tagging CRY2 with the catalytic domain of PKC isozymes can efficiently promote its translocation to the cell surface upon blue light exposure.
Claim 217pathway scopesupports2022Source 18needs review

Arabidopsis cryptochrome signaling involves interactions with transcription factors, hormone signaling intermediates, chromatin-remodeling proteins, and proteins involved in RNA N6 adenosine methylation.

These include the COP1/SPA E3 ubiquitin ligase, several transcription factors, hormone signaling intermediates and proteins involved in chromatin-remodeling and RNA N6 adenosine methylation.
Claim 218performancesupports2022Source 16needs review

optoSynC can inhibit exocytosis for several hours at very low light intensities.

Further, optoSynC can inhibit exocytosis for several hours, at very low light intensities.
exocytosis inhibition duration several hourslight intensity very low
Claim 219performancesupports2022Source 16needs review

optoSynC can inhibit exocytosis for several hours at very low light intensities.

Further, optoSynC can inhibit exocytosis for several hours, at very low light intensities.
exocytosis inhibition duration several hourslight intensity very low
Claim 220performancesupports2022Source 16needs review

optoSynC can inhibit exocytosis for several hours at very low light intensities.

Further, optoSynC can inhibit exocytosis for several hours, at very low light intensities.
exocytosis inhibition duration several hourslight intensity very low
Claim 221performancesupports2022Source 16needs review

optoSynC can inhibit exocytosis for several hours at very low light intensities.

Further, optoSynC can inhibit exocytosis for several hours, at very low light intensities.
exocytosis inhibition duration several hourslight intensity very low
Claim 222performancesupports2022Source 16needs review

optoSynC can inhibit exocytosis for several hours at very low light intensities.

Further, optoSynC can inhibit exocytosis for several hours, at very low light intensities.
exocytosis inhibition duration several hourslight intensity very low
Claim 223performancesupports2022Source 16needs review

optoSynC can inhibit exocytosis for several hours at very low light intensities.

Further, optoSynC can inhibit exocytosis for several hours, at very low light intensities.
exocytosis inhibition duration several hourslight intensity very low
Claim 224performancesupports2022Source 16needs review

optoSynC can inhibit exocytosis for several hours at very low light intensities.

Further, optoSynC can inhibit exocytosis for several hours, at very low light intensities.
exocytosis inhibition duration several hourslight intensity very low
Claim 225performancesupports2022Source 16needs review

optoSynC causes rapid locomotion silencing with an activation time constant of approximately 15 seconds and recovery after light-off with a time constant of approximately 10 minutes.

Locomotion silencing is rapid (tau on ∼15 s) and recovers quickly (tau off ∼10 min) after light-off.
locomotion silencing tau on 15 srecovery tau off after light-off 10 min
Claim 226performancesupports2022Source 16needs review

optoSynC causes rapid locomotion silencing with an activation time constant of approximately 15 seconds and recovery after light-off with a time constant of approximately 10 minutes.

Locomotion silencing is rapid (tau on ∼15 s) and recovers quickly (tau off ∼10 min) after light-off.
locomotion silencing tau on 15 srecovery tau off after light-off 10 min
Claim 227performancesupports2022Source 16needs review

optoSynC causes rapid locomotion silencing with an activation time constant of approximately 15 seconds and recovery after light-off with a time constant of approximately 10 minutes.

Locomotion silencing is rapid (tau on ∼15 s) and recovers quickly (tau off ∼10 min) after light-off.
locomotion silencing tau on 15 srecovery tau off after light-off 10 min
Claim 228performancesupports2022Source 16needs review

optoSynC causes rapid locomotion silencing with an activation time constant of approximately 15 seconds and recovery after light-off with a time constant of approximately 10 minutes.

Locomotion silencing is rapid (tau on ∼15 s) and recovers quickly (tau off ∼10 min) after light-off.
locomotion silencing tau on 15 srecovery tau off after light-off 10 min
Claim 229performancesupports2022Source 16needs review

optoSynC causes rapid locomotion silencing with an activation time constant of approximately 15 seconds and recovery after light-off with a time constant of approximately 10 minutes.

Locomotion silencing is rapid (tau on ∼15 s) and recovers quickly (tau off ∼10 min) after light-off.
locomotion silencing tau on 15 srecovery tau off after light-off 10 min
Claim 230performancesupports2022Source 16needs review

optoSynC causes rapid locomotion silencing with an activation time constant of approximately 15 seconds and recovery after light-off with a time constant of approximately 10 minutes.

Locomotion silencing is rapid (tau on ∼15 s) and recovers quickly (tau off ∼10 min) after light-off.
locomotion silencing tau on 15 srecovery tau off after light-off 10 min
Claim 231performancesupports2022Source 16needs review

optoSynC causes rapid locomotion silencing with an activation time constant of approximately 15 seconds and recovery after light-off with a time constant of approximately 10 minutes.

Locomotion silencing is rapid (tau on ∼15 s) and recovers quickly (tau off ∼10 min) after light-off.
locomotion silencing tau on 15 srecovery tau off after light-off 10 min
Claim 232performancesupports2022Source 16needs review

optoSynC clusters synaptic vesicles within 25 seconds.

optoSynC clusters SVs within 25 s
synaptic vesicle clustering time 25 s
Claim 233performancesupports2022Source 16needs review

optoSynC clusters synaptic vesicles within 25 seconds.

optoSynC clusters SVs within 25 s
synaptic vesicle clustering time 25 s
Claim 234performancesupports2022Source 16needs review

optoSynC clusters synaptic vesicles within 25 seconds.

optoSynC clusters SVs within 25 s
synaptic vesicle clustering time 25 s
Claim 235performancesupports2022Source 16needs review

optoSynC clusters synaptic vesicles within 25 seconds.

optoSynC clusters SVs within 25 s
synaptic vesicle clustering time 25 s
Claim 236performancesupports2022Source 16needs review

optoSynC clusters synaptic vesicles within 25 seconds.

optoSynC clusters SVs within 25 s
synaptic vesicle clustering time 25 s
Claim 237performancesupports2022Source 16needs review

optoSynC clusters synaptic vesicles within 25 seconds.

optoSynC clusters SVs within 25 s
synaptic vesicle clustering time 25 s
Claim 238performancesupports2022Source 16needs review

optoSynC clusters synaptic vesicles within 25 seconds.

optoSynC clusters SVs within 25 s
synaptic vesicle clustering time 25 s
Claim 239specificitysupports2022Source 16needs review

optoSynC does not affect ion currents, biochemistry, or synaptic proteins.

does not affect ion currents, biochemistry or synaptic proteins
Claim 240specificitysupports2022Source 16needs review

optoSynC does not affect ion currents, biochemistry, or synaptic proteins.

does not affect ion currents, biochemistry or synaptic proteins
Claim 241specificitysupports2022Source 16needs review

optoSynC does not affect ion currents, biochemistry, or synaptic proteins.

does not affect ion currents, biochemistry or synaptic proteins
Claim 242specificitysupports2022Source 16needs review

optoSynC does not affect ion currents, biochemistry, or synaptic proteins.

does not affect ion currents, biochemistry or synaptic proteins
Claim 243specificitysupports2022Source 16needs review

optoSynC does not affect ion currents, biochemistry, or synaptic proteins.

does not affect ion currents, biochemistry or synaptic proteins
Claim 244specificitysupports2022Source 16needs review

optoSynC does not affect ion currents, biochemistry, or synaptic proteins.

does not affect ion currents, biochemistry or synaptic proteins
Claim 245specificitysupports2022Source 16needs review

optoSynC does not affect ion currents, biochemistry, or synaptic proteins.

does not affect ion currents, biochemistry or synaptic proteins
Claim 246structural observationsupports2022Source 16needs review

optoSynC clusters synaptic vesicles, observable by electron microscopy.

optoSynC clusters SVs, observable by electron microscopy.
Claim 247structural observationsupports2022Source 16needs review

optoSynC clusters synaptic vesicles, observable by electron microscopy.

optoSynC clusters SVs, observable by electron microscopy.
Claim 248structural observationsupports2022Source 16needs review

optoSynC clusters synaptic vesicles, observable by electron microscopy.

optoSynC clusters SVs, observable by electron microscopy.
Claim 249structural observationsupports2022Source 16needs review

optoSynC clusters synaptic vesicles, observable by electron microscopy.

optoSynC clusters SVs, observable by electron microscopy.
Claim 250structural observationsupports2022Source 16needs review

optoSynC clusters synaptic vesicles, observable by electron microscopy.

optoSynC clusters SVs, observable by electron microscopy.
Claim 251structural observationsupports2022Source 16needs review

optoSynC clusters synaptic vesicles, observable by electron microscopy.

optoSynC clusters SVs, observable by electron microscopy.
Claim 252structural observationsupports2022Source 16needs review

optoSynC clusters synaptic vesicles, observable by electron microscopy.

optoSynC clusters SVs, observable by electron microscopy.
Claim 253tool developmentsupports2022Source 1needs review

The authors developed an optogenetic blue light-activated PKC isozyme system based on CRY2-CIB1 dimerization.

Here, we developed an optogenetic blue light-activated PKC isozyme that harnesses a plant-based dimerization system between the photosensitive cryptochrome-2 (CRY2) and the N terminus of the transcription factor calcium and integrin-binding protein 1 (CIB1)
Claim 254tool developmentsupports2022Source 1needs review

The authors developed an optogenetic blue light-activated PKC isozyme system based on CRY2-CIB1 dimerization.

Here, we developed an optogenetic blue light-activated PKC isozyme that harnesses a plant-based dimerization system between the photosensitive cryptochrome-2 (CRY2) and the N terminus of the transcription factor calcium and integrin-binding protein 1 (CIB1)
Claim 255tool developmentsupports2022Source 1needs review

The authors developed an optogenetic blue light-activated PKC isozyme system based on CRY2-CIB1 dimerization.

Here, we developed an optogenetic blue light-activated PKC isozyme that harnesses a plant-based dimerization system between the photosensitive cryptochrome-2 (CRY2) and the N terminus of the transcription factor calcium and integrin-binding protein 1 (CIB1)
Claim 256tool developmentsupports2022Source 1needs review

The authors developed an optogenetic blue light-activated PKC isozyme system based on CRY2-CIB1 dimerization.

Here, we developed an optogenetic blue light-activated PKC isozyme that harnesses a plant-based dimerization system between the photosensitive cryptochrome-2 (CRY2) and the N terminus of the transcription factor calcium and integrin-binding protein 1 (CIB1)
Claim 257tool developmentsupports2022Source 1needs review

The authors developed an optogenetic blue light-activated PKC isozyme system based on CRY2-CIB1 dimerization.

Here, we developed an optogenetic blue light-activated PKC isozyme that harnesses a plant-based dimerization system between the photosensitive cryptochrome-2 (CRY2) and the N terminus of the transcription factor calcium and integrin-binding protein 1 (CIB1)
Claim 258tool developmentsupports2022Source 1needs review

The authors developed an optogenetic blue light-activated PKC isozyme system based on CRY2-CIB1 dimerization.

Here, we developed an optogenetic blue light-activated PKC isozyme that harnesses a plant-based dimerization system between the photosensitive cryptochrome-2 (CRY2) and the N terminus of the transcription factor calcium and integrin-binding protein 1 (CIB1)
Claim 259tool developmentsupports2022Source 1needs review

The authors developed an optogenetic blue light-activated PKC isozyme system based on CRY2-CIB1 dimerization.

Here, we developed an optogenetic blue light-activated PKC isozyme that harnesses a plant-based dimerization system between the photosensitive cryptochrome-2 (CRY2) and the N terminus of the transcription factor calcium and integrin-binding protein 1 (CIB1)
Claim 260functional effectsupports2021Source 21needs review

CRY2-mediated blue-light signaling enhances freezing tolerance.

CRY2-mediated blue-light signaling enhances freezing tolerance
Claim 261functional effectsupports2021Source 21needs review

CRY2-mediated blue-light signaling enhances freezing tolerance.

CRY2-mediated blue-light signaling enhances freezing tolerance
Claim 262functional effectsupports2021Source 21needs review

CRY2-mediated blue-light signaling enhances freezing tolerance.

CRY2-mediated blue-light signaling enhances freezing tolerance
Claim 263functional effectsupports2021Source 21needs review

CRY2-mediated blue-light signaling enhances freezing tolerance.

CRY2-mediated blue-light signaling enhances freezing tolerance
Claim 264functional effectsupports2021Source 21needs review

CRY2-mediated blue-light signaling enhances freezing tolerance.

CRY2-mediated blue-light signaling enhances freezing tolerance
Claim 265functional effectsupports2021Source 21needs review

CRY2-mediated blue-light signaling enhances freezing tolerance.

CRY2-mediated blue-light signaling enhances freezing tolerance
Claim 266functional effectsupports2021Source 21needs review

CRY2-mediated blue-light signaling enhances freezing tolerance.

CRY2-mediated blue-light signaling enhances freezing tolerance
Claim 267mechanistic insightsupports2021Source 19needs review

Systematic structure-based analyses of photo-activated and inactive plant CRYs elucidate distinct structural elements and critical residues that dynamically participate in photo-induced oligomerization.

Systematic structure-based analyses of photo-activated and inactive plant CRYs elucidate distinct structural elements and critical residues that dynamically partake in photo-induced oligomerization.
Claim 268mechanistic modelsupports2021Source 19needs review

The study offers an updated model of cryptochrome photoactivation mechanism and its regulation by interacting proteins.

Our study offers an updated model of CRYs photoactivation mechanism as well as the mode of its regulation by interacting proteins.
Claim 269molecular mechanismsupports2021Source 21needs review

Cold-stabilized CRY2 competes with HY5 and attenuates the HY5-COP1 interaction, allowing HY5 to accumulate at cold temperatures.

cold-stabilized CRY2 competes with the transcription factor HY5 to attenuate the HY5-COP1 interaction, thereby allowing HY5 to accumulate at cold temperatures
Claim 270molecular mechanismsupports2021Source 21needs review

Cold-stabilized CRY2 competes with HY5 and attenuates the HY5-COP1 interaction, allowing HY5 to accumulate at cold temperatures.

cold-stabilized CRY2 competes with the transcription factor HY5 to attenuate the HY5-COP1 interaction, thereby allowing HY5 to accumulate at cold temperatures
Claim 271molecular mechanismsupports2021Source 21needs review

Cold-stabilized CRY2 competes with HY5 and attenuates the HY5-COP1 interaction, allowing HY5 to accumulate at cold temperatures.

cold-stabilized CRY2 competes with the transcription factor HY5 to attenuate the HY5-COP1 interaction, thereby allowing HY5 to accumulate at cold temperatures
Claim 272molecular mechanismsupports2021Source 21needs review

Cold-stabilized CRY2 competes with HY5 and attenuates the HY5-COP1 interaction, allowing HY5 to accumulate at cold temperatures.

cold-stabilized CRY2 competes with the transcription factor HY5 to attenuate the HY5-COP1 interaction, thereby allowing HY5 to accumulate at cold temperatures
Claim 273molecular mechanismsupports2021Source 21needs review

Cold-stabilized CRY2 competes with HY5 and attenuates the HY5-COP1 interaction, allowing HY5 to accumulate at cold temperatures.

cold-stabilized CRY2 competes with the transcription factor HY5 to attenuate the HY5-COP1 interaction, thereby allowing HY5 to accumulate at cold temperatures
Claim 274molecular mechanismsupports2021Source 21needs review

Cold-stabilized CRY2 competes with HY5 and attenuates the HY5-COP1 interaction, allowing HY5 to accumulate at cold temperatures.

cold-stabilized CRY2 competes with the transcription factor HY5 to attenuate the HY5-COP1 interaction, thereby allowing HY5 to accumulate at cold temperatures
Claim 275molecular mechanismsupports2021Source 21needs review

Cold-stabilized CRY2 competes with HY5 and attenuates the HY5-COP1 interaction, allowing HY5 to accumulate at cold temperatures.

cold-stabilized CRY2 competes with the transcription factor HY5 to attenuate the HY5-COP1 interaction, thereby allowing HY5 to accumulate at cold temperatures
Claim 276regulatory rolesupports2021Source 21needs review

The CRY2-COP1-HY5-BBX7/8 module regulates blue light-dependent cold acclimation in Arabidopsis thaliana.

we demonstrate that the CRYPTOCHROME2 (CRY2)-COP1-HY5-BBX7/8 module regulates blue light-dependent cold acclimation in Arabidopsis thaliana
Claim 277regulatory rolesupports2021Source 21needs review

The CRY2-COP1-HY5-BBX7/8 module regulates blue light-dependent cold acclimation in Arabidopsis thaliana.

we demonstrate that the CRYPTOCHROME2 (CRY2)-COP1-HY5-BBX7/8 module regulates blue light-dependent cold acclimation in Arabidopsis thaliana
Claim 278regulatory rolesupports2021Source 21needs review

The CRY2-COP1-HY5-BBX7/8 module regulates blue light-dependent cold acclimation in Arabidopsis thaliana.

we demonstrate that the CRYPTOCHROME2 (CRY2)-COP1-HY5-BBX7/8 module regulates blue light-dependent cold acclimation in Arabidopsis thaliana
Claim 279regulatory rolesupports2021Source 21needs review

The CRY2-COP1-HY5-BBX7/8 module regulates blue light-dependent cold acclimation in Arabidopsis thaliana.

we demonstrate that the CRYPTOCHROME2 (CRY2)-COP1-HY5-BBX7/8 module regulates blue light-dependent cold acclimation in Arabidopsis thaliana
Claim 280regulatory rolesupports2021Source 21needs review

The CRY2-COP1-HY5-BBX7/8 module regulates blue light-dependent cold acclimation in Arabidopsis thaliana.

we demonstrate that the CRYPTOCHROME2 (CRY2)-COP1-HY5-BBX7/8 module regulates blue light-dependent cold acclimation in Arabidopsis thaliana
Claim 281regulatory rolesupports2021Source 21needs review

The CRY2-COP1-HY5-BBX7/8 module regulates blue light-dependent cold acclimation in Arabidopsis thaliana.

we demonstrate that the CRYPTOCHROME2 (CRY2)-COP1-HY5-BBX7/8 module regulates blue light-dependent cold acclimation in Arabidopsis thaliana
Claim 282regulatory rolesupports2021Source 21needs review

The CRY2-COP1-HY5-BBX7/8 module regulates blue light-dependent cold acclimation in Arabidopsis thaliana.

we demonstrate that the CRYPTOCHROME2 (CRY2)-COP1-HY5-BBX7/8 module regulates blue light-dependent cold acclimation in Arabidopsis thaliana
Claim 283stability changesupports2021Source 21needs review

Blue light-induced phosphorylated forms of CRY2 are stabilized by cold stress.

phosphorylated forms of CRY2 induced by blue light are stabilized by cold stress
Claim 284stability changesupports2021Source 21needs review

Blue light-induced phosphorylated forms of CRY2 are stabilized by cold stress.

phosphorylated forms of CRY2 induced by blue light are stabilized by cold stress
Claim 285stability changesupports2021Source 21needs review

Blue light-induced phosphorylated forms of CRY2 are stabilized by cold stress.

phosphorylated forms of CRY2 induced by blue light are stabilized by cold stress
Claim 286stability changesupports2021Source 21needs review

Blue light-induced phosphorylated forms of CRY2 are stabilized by cold stress.

phosphorylated forms of CRY2 induced by blue light are stabilized by cold stress
Claim 287stability changesupports2021Source 21needs review

Blue light-induced phosphorylated forms of CRY2 are stabilized by cold stress.

phosphorylated forms of CRY2 induced by blue light are stabilized by cold stress
Claim 288stability changesupports2021Source 21needs review

Blue light-induced phosphorylated forms of CRY2 are stabilized by cold stress.

phosphorylated forms of CRY2 induced by blue light are stabilized by cold stress
Claim 289stability changesupports2021Source 21needs review

Blue light-induced phosphorylated forms of CRY2 are stabilized by cold stress.

phosphorylated forms of CRY2 induced by blue light are stabilized by cold stress
Claim 290structural characterizationsupports2021Source 19needs review

The study determined the crystal structure of the photosensory domain of Arabidopsis CRY2 in a tetrameric active state.

In this study, we determine the crystal structure of the photosensory domain of Arabidopsis CRY2 in a tetrameric active state.
Claim 291applicationsupports2020Source 25needs review

Cryptochrome 2 and a light-activated degron are used for optogenetic control of gene expression.

Optogenetic Control of Gene Expression Using Cryptochrome 2 and a Light-Activated Degron
Claim 292functionsupports2020Source 26needs review

Cryptochromes are blue-light receptors that mediate photoresponses in plants.

Cryptochromes are blue-light receptors that mediate photoresponses in plants.
Claim 293integrationsupports2020Source 26needs review

Cryptochromes integrate blue-light signals with other internal and external signals to optimize plant growth and development.

These two mechanisms enable cryptochromes to integrate blue-light signals with other internal and external signals to optimize plant growth and development.
Claim 294mechanismsupports2020Source 26needs review

Cryptochrome homooligomerization alters the affinity of cryptochromes for cryptochrome-interacting proteins to form various cryptochrome complexes.

which alters the affinity of cryptochromes interacting with cryptochrome-interacting proteins to form various cryptochrome complexes
Claim 295mechanismsupports2020Source 26needs review

In darkness cryptochromes are physiologically inactive monomers, and photon absorption leads to conformational change and cryptochrome homooligomerization.

Cryptochromes exist as physiologically inactive monomers in the dark; the absorption of photons leads to conformational change and cryptochrome homooligomerization
Claim 296mechanismsupports2020Source 26needs review

Photoresponsive protein-protein interaction is the primary mode of signal transduction of cryptochromes.

Photoresponsive protein-protein interaction is the primary mode of signal transduction of cryptochromes.
Claim 297regulationsupports2020Source 26needs review

Cryptochrome activity is regulated by photooligomerization, dark monomerization, cryptochrome regulatory proteins, and cryptochrome phosphorylation, ubiquitination, and degradation.

The activity of cryptochromes is regulated by photooligomerization; dark monomerization; cryptochrome regulatory proteins; and cryptochrome phosphorylation, ubiquitination, and degradation.
Claim 298comparative performancesupports2019Source 12needs review

Among the compared strategies, the CRY2-integrated approach that combines light-induced membrane recruitment and iTrkB homo-interaction was the most efficient at activating TrkB receptors.

By comparing all the different strategies, we find that the CRY2-integrated approach to achieve light-induced cell membrane recruitment and homo-interaction of iTrkB is most efficient in activating TrkB receptors.
Claim 299comparative performancesupports2019Source 12needs review

Among the compared strategies, the CRY2-integrated approach that combines light-induced membrane recruitment and iTrkB homo-interaction was the most efficient at activating TrkB receptors.

By comparing all the different strategies, we find that the CRY2-integrated approach to achieve light-induced cell membrane recruitment and homo-interaction of iTrkB is most efficient in activating TrkB receptors.
Claim 300comparative performancesupports2019Source 12needs review

Among the compared strategies, the CRY2-integrated approach that combines light-induced membrane recruitment and iTrkB homo-interaction was the most efficient at activating TrkB receptors.

By comparing all the different strategies, we find that the CRY2-integrated approach to achieve light-induced cell membrane recruitment and homo-interaction of iTrkB is most efficient in activating TrkB receptors.
Claim 301comparative performancesupports2019Source 12needs review

Among the compared strategies, the CRY2-integrated approach that combines light-induced membrane recruitment and iTrkB homo-interaction was the most efficient at activating TrkB receptors.

By comparing all the different strategies, we find that the CRY2-integrated approach to achieve light-induced cell membrane recruitment and homo-interaction of iTrkB is most efficient in activating TrkB receptors.
Claim 302comparative performancesupports2019Source 12needs review

Among the compared strategies, the CRY2-integrated approach that combines light-induced membrane recruitment and iTrkB homo-interaction was the most efficient at activating TrkB receptors.

By comparing all the different strategies, we find that the CRY2-integrated approach to achieve light-induced cell membrane recruitment and homo-interaction of iTrkB is most efficient in activating TrkB receptors.
Claim 303comparative performancesupports2019Source 12needs review

Among the compared strategies, the CRY2-integrated approach that combines light-induced membrane recruitment and iTrkB homo-interaction was the most efficient at activating TrkB receptors.

By comparing all the different strategies, we find that the CRY2-integrated approach to achieve light-induced cell membrane recruitment and homo-interaction of iTrkB is most efficient in activating TrkB receptors.
Claim 304comparative performancesupports2019Source 12needs review

Among the compared strategies, the CRY2-integrated approach that combines light-induced membrane recruitment and iTrkB homo-interaction was the most efficient at activating TrkB receptors.

By comparing all the different strategies, we find that the CRY2-integrated approach to achieve light-induced cell membrane recruitment and homo-interaction of iTrkB is most efficient in activating TrkB receptors.
Claim 305dependency relationshipsupports2019Source 27needs review

BEE1 promotes flowering in a CRY2 partially dependent manner.

BEE1 promotes flowering in a blue light photoreceptor CRYPTOCHROME 2 (CRY2) partially dependent manner
Claim 306generalizabilitysupports2019Source 12needs review

The optical TrkB activation strategy is generalizable to other optical homo-dimerizers, including an aureochrome 1 LOV-domain-based implementation.

we prove that such strategies are generalizable to other optical homo-dimerizers by demonstrating the optical TrkB activation based on the light-oxygen-voltage domain of aureochrome 1 from Vaucheria frigida
Claim 307generalizabilitysupports2019Source 12needs review

The optical TrkB activation strategy is generalizable to other optical homo-dimerizers, including an aureochrome 1 LOV-domain-based implementation.

we prove that such strategies are generalizable to other optical homo-dimerizers by demonstrating the optical TrkB activation based on the light-oxygen-voltage domain of aureochrome 1 from Vaucheria frigida
Claim 308generalizabilitysupports2019Source 12needs review

The optical TrkB activation strategy is generalizable to other optical homo-dimerizers, including an aureochrome 1 LOV-domain-based implementation.

we prove that such strategies are generalizable to other optical homo-dimerizers by demonstrating the optical TrkB activation based on the light-oxygen-voltage domain of aureochrome 1 from Vaucheria frigida
Claim 309generalizabilitysupports2019Source 12needs review

The optical TrkB activation strategy is generalizable to other optical homo-dimerizers, including an aureochrome 1 LOV-domain-based implementation.

we prove that such strategies are generalizable to other optical homo-dimerizers by demonstrating the optical TrkB activation based on the light-oxygen-voltage domain of aureochrome 1 from Vaucheria frigida
Claim 310generalizabilitysupports2019Source 12needs review

The optical TrkB activation strategy is generalizable to other optical homo-dimerizers, including an aureochrome 1 LOV-domain-based implementation.

we prove that such strategies are generalizable to other optical homo-dimerizers by demonstrating the optical TrkB activation based on the light-oxygen-voltage domain of aureochrome 1 from Vaucheria frigida
Claim 311generalizabilitysupports2019Source 12needs review

The optical TrkB activation strategy is generalizable to other optical homo-dimerizers, including an aureochrome 1 LOV-domain-based implementation.

we prove that such strategies are generalizable to other optical homo-dimerizers by demonstrating the optical TrkB activation based on the light-oxygen-voltage domain of aureochrome 1 from Vaucheria frigida
Claim 312generalizabilitysupports2019Source 12needs review

The optical TrkB activation strategy is generalizable to other optical homo-dimerizers, including an aureochrome 1 LOV-domain-based implementation.

we prove that such strategies are generalizable to other optical homo-dimerizers by demonstrating the optical TrkB activation based on the light-oxygen-voltage domain of aureochrome 1 from Vaucheria frigida
Claim 313mechanismsupports2019Source 28needs review

Activity of a split synthetic zinc-finger transcription factor is reconstituted using CRY2- and CIB1-mediated light-induced dimerization.

We reconstitute activity of a split synthetic zinc-finger transcription factor (TF) using light-induced dimerization mediated by the proteins CRY2 and CIB1.
Claim 314pathway modelsupports2019Source 27needs review

BEE1 integrates BES1 and CRY2 in mediating flowering, and BES1-BEE1-FT is a signaling pathway regulating photoperiodic flowering.

Our findings indicate that BEE1 is the integrator of BES1 and CRY2 mediating flowering, and BES1-BEE1-FT is a new signaling pathway in regulating photoperiodic flowering.
Claim 315phenotypic effectsupports2019Source 12needs review

A CRY2-based iTrkB optical strategy induces neurite outgrowth in PC12 cells.

the light-inducible homo-interaction of the intracellular domain of TrkB (iTrkB) in the cytosol or on the plasma membrane is able to induce the activation of downstream MAPK/ERK and PI3K/Akt signaling as well as the neurite outgrowth of PC12 cells
Claim 316phenotypic effectsupports2019Source 12needs review

A CRY2-based iTrkB optical strategy induces neurite outgrowth in PC12 cells.

the light-inducible homo-interaction of the intracellular domain of TrkB (iTrkB) in the cytosol or on the plasma membrane is able to induce the activation of downstream MAPK/ERK and PI3K/Akt signaling as well as the neurite outgrowth of PC12 cells
Claim 317phenotypic effectsupports2019Source 12needs review

A CRY2-based iTrkB optical strategy induces neurite outgrowth in PC12 cells.

the light-inducible homo-interaction of the intracellular domain of TrkB (iTrkB) in the cytosol or on the plasma membrane is able to induce the activation of downstream MAPK/ERK and PI3K/Akt signaling as well as the neurite outgrowth of PC12 cells
Claim 318phenotypic effectsupports2019Source 12needs review

A CRY2-based iTrkB optical strategy induces neurite outgrowth in PC12 cells.

the light-inducible homo-interaction of the intracellular domain of TrkB (iTrkB) in the cytosol or on the plasma membrane is able to induce the activation of downstream MAPK/ERK and PI3K/Akt signaling as well as the neurite outgrowth of PC12 cells
Claim 319phenotypic effectsupports2019Source 12needs review

A CRY2-based iTrkB optical strategy induces neurite outgrowth in PC12 cells.

the light-inducible homo-interaction of the intracellular domain of TrkB (iTrkB) in the cytosol or on the plasma membrane is able to induce the activation of downstream MAPK/ERK and PI3K/Akt signaling as well as the neurite outgrowth of PC12 cells
Claim 320phenotypic effectsupports2019Source 12needs review

A CRY2-based iTrkB optical strategy induces neurite outgrowth in PC12 cells.

the light-inducible homo-interaction of the intracellular domain of TrkB (iTrkB) in the cytosol or on the plasma membrane is able to induce the activation of downstream MAPK/ERK and PI3K/Akt signaling as well as the neurite outgrowth of PC12 cells
Claim 321phenotypic effectsupports2019Source 12needs review

A CRY2-based iTrkB optical strategy induces neurite outgrowth in PC12 cells.

the light-inducible homo-interaction of the intracellular domain of TrkB (iTrkB) in the cytosol or on the plasma membrane is able to induce the activation of downstream MAPK/ERK and PI3K/Akt signaling as well as the neurite outgrowth of PC12 cells
Claim 322physical interactionsupports2019Source 27needs review

BEE1 physically interacts with CRY2 under blue light.

as it physically interacts with CRY2 under the blue light
Claim 323signaling activationsupports2019Source 12needs review

A CRY2-based iTrkB optical strategy can activate downstream MAPK/ERK and PI3K/Akt signaling.

Utilizing the photosensitive protein Arabidopsis thaliana cryptochrome 2 (CRY2), the light-inducible homo-interaction of the intracellular domain of TrkB (iTrkB) in the cytosol or on the plasma membrane is able to induce the activation of downstream MAPK/ERK and PI3K/Akt signaling
Claim 324signaling activationsupports2019Source 12needs review

A CRY2-based iTrkB optical strategy can activate downstream MAPK/ERK and PI3K/Akt signaling.

Utilizing the photosensitive protein Arabidopsis thaliana cryptochrome 2 (CRY2), the light-inducible homo-interaction of the intracellular domain of TrkB (iTrkB) in the cytosol or on the plasma membrane is able to induce the activation of downstream MAPK/ERK and PI3K/Akt signaling
Claim 325signaling activationsupports2019Source 12needs review

A CRY2-based iTrkB optical strategy can activate downstream MAPK/ERK and PI3K/Akt signaling.

Utilizing the photosensitive protein Arabidopsis thaliana cryptochrome 2 (CRY2), the light-inducible homo-interaction of the intracellular domain of TrkB (iTrkB) in the cytosol or on the plasma membrane is able to induce the activation of downstream MAPK/ERK and PI3K/Akt signaling
Claim 326signaling activationsupports2019Source 12needs review

A CRY2-based iTrkB optical strategy can activate downstream MAPK/ERK and PI3K/Akt signaling.

Utilizing the photosensitive protein Arabidopsis thaliana cryptochrome 2 (CRY2), the light-inducible homo-interaction of the intracellular domain of TrkB (iTrkB) in the cytosol or on the plasma membrane is able to induce the activation of downstream MAPK/ERK and PI3K/Akt signaling
Claim 327signaling activationsupports2019Source 12needs review

A CRY2-based iTrkB optical strategy can activate downstream MAPK/ERK and PI3K/Akt signaling.

Utilizing the photosensitive protein Arabidopsis thaliana cryptochrome 2 (CRY2), the light-inducible homo-interaction of the intracellular domain of TrkB (iTrkB) in the cytosol or on the plasma membrane is able to induce the activation of downstream MAPK/ERK and PI3K/Akt signaling
Claim 328signaling activationsupports2019Source 12needs review

A CRY2-based iTrkB optical strategy can activate downstream MAPK/ERK and PI3K/Akt signaling.

Utilizing the photosensitive protein Arabidopsis thaliana cryptochrome 2 (CRY2), the light-inducible homo-interaction of the intracellular domain of TrkB (iTrkB) in the cytosol or on the plasma membrane is able to induce the activation of downstream MAPK/ERK and PI3K/Akt signaling
Claim 329signaling activationsupports2019Source 12needs review

A CRY2-based iTrkB optical strategy can activate downstream MAPK/ERK and PI3K/Akt signaling.

Utilizing the photosensitive protein Arabidopsis thaliana cryptochrome 2 (CRY2), the light-inducible homo-interaction of the intracellular domain of TrkB (iTrkB) in the cytosol or on the plasma membrane is able to induce the activation of downstream MAPK/ERK and PI3K/Akt signaling
Claim 330tool developmentsupports2019Source 12needs review

The authors developed different optogenetic approaches that use light to activate TrkB receptors.

Here we develop different optogenetic approaches that use light to activate TrkB receptors.
Claim 331tool developmentsupports2019Source 12needs review

The authors developed different optogenetic approaches that use light to activate TrkB receptors.

Here we develop different optogenetic approaches that use light to activate TrkB receptors.
Claim 332tool developmentsupports2019Source 12needs review

The authors developed different optogenetic approaches that use light to activate TrkB receptors.

Here we develop different optogenetic approaches that use light to activate TrkB receptors.
Claim 333tool developmentsupports2019Source 12needs review

The authors developed different optogenetic approaches that use light to activate TrkB receptors.

Here we develop different optogenetic approaches that use light to activate TrkB receptors.
Claim 334tool developmentsupports2019Source 12needs review

The authors developed different optogenetic approaches that use light to activate TrkB receptors.

Here we develop different optogenetic approaches that use light to activate TrkB receptors.
Claim 335tool developmentsupports2019Source 12needs review

The authors developed different optogenetic approaches that use light to activate TrkB receptors.

Here we develop different optogenetic approaches that use light to activate TrkB receptors.
Claim 336tool developmentsupports2019Source 12needs review

The authors developed different optogenetic approaches that use light to activate TrkB receptors.

Here we develop different optogenetic approaches that use light to activate TrkB receptors.
Claim 337topic scopesupports2019Source 29needs review

The paper concerns optogenetic regulation of gene expression in mammalian cells using cryptochrome 2 (CRY2).

Claim 338use casesupports2019Source 12needs review

The presented optogenetic strategies are promising tools for investigating BDNF/TrkB signaling with tight spatial and temporal control.

The optogenetic strategies presented are promising tools to investigate BDNF/TrkB signaling with tight spatial and temporal control.
Claim 339use casesupports2019Source 12needs review

The presented optogenetic strategies are promising tools for investigating BDNF/TrkB signaling with tight spatial and temporal control.

The optogenetic strategies presented are promising tools to investigate BDNF/TrkB signaling with tight spatial and temporal control.
Claim 340use casesupports2019Source 12needs review

The presented optogenetic strategies are promising tools for investigating BDNF/TrkB signaling with tight spatial and temporal control.

The optogenetic strategies presented are promising tools to investigate BDNF/TrkB signaling with tight spatial and temporal control.
Claim 341use casesupports2019Source 12needs review

The presented optogenetic strategies are promising tools for investigating BDNF/TrkB signaling with tight spatial and temporal control.

The optogenetic strategies presented are promising tools to investigate BDNF/TrkB signaling with tight spatial and temporal control.
Claim 342use casesupports2019Source 12needs review

The presented optogenetic strategies are promising tools for investigating BDNF/TrkB signaling with tight spatial and temporal control.

The optogenetic strategies presented are promising tools to investigate BDNF/TrkB signaling with tight spatial and temporal control.
Claim 343use casesupports2019Source 12needs review

The presented optogenetic strategies are promising tools for investigating BDNF/TrkB signaling with tight spatial and temporal control.

The optogenetic strategies presented are promising tools to investigate BDNF/TrkB signaling with tight spatial and temporal control.
Claim 344use casesupports2019Source 12needs review

The presented optogenetic strategies are promising tools for investigating BDNF/TrkB signaling with tight spatial and temporal control.

The optogenetic strategies presented are promising tools to investigate BDNF/TrkB signaling with tight spatial and temporal control.
Claim 345cell cycle effectsupports2018Source 30needs review

CRY2 knockdown increases S phase cell population and reduces G1 phase cell population in HOS osteosarcoma cells.

CRY2 knockdown increased the S phase cell population and reduced the G1 phase cell population.
Claim 346clock gene network regulationsupports2018Source 30needs review

CRY2 knockdown increases mRNA expression of CRY1, PER1, PER2, BMAL1, and CLOCK in HOS osteosarcoma cells.

knockdown of CRY2 significantly increased the mRNA expression of CRY1, Period (PER) 1, PER2, BMAL1, and CLOCK.
Claim 347disease rolesupports2018Source 30needs review

CRY2 may function as an anti-oncogene in osteosarcoma.

Our results suggest that CRY2 may be an anti-oncogene in OS
Claim 348expression changesupports2018Source 30needs review

CRY2 knockdown decreases P53 expression and increases c-myc and cyclin D1 expression in HOS osteosarcoma cells.

CRY2 knockdown decreased P53 expression and increased expression of c-myc and cyclin D1.
Claim 349functional rolesupports2018Source 30needs review

CRY2 suppresses proliferation and migration in HOS osteosarcoma cells.

CRY2 knockdown promoted HOS OS cell proliferation and migration.
Claim 350signaling effectsupports2018Source 30needs review

CRY2 knockdown increases ERK1/2 phosphorylation but does not change JNK and P38 phosphorylation in HOS osteosarcoma cells.

CRY2 knockdown increased the phosphorylation of extracellular signal-regulated kinase (ERK) 1/2, but did not change the phosphorylation of c-Jun N terminal kinase (JNK) and P38.
Claim 351signaling effectsupports2018Source 30needs review

CRY2 knockdown increases MMP-2 and β-catenin expression and promotes MAPK and Wnt/β-catenin signaling in HOS osteosarcoma cells.

CRY2 knockdown also increased the expression of matrix metalloproteinase (MMP)-2 and β-catenin, and increased OS cell proliferation and migration by inducing cell cycle progression and promoting mitogen-activated protein kinase (MAPK) and Wnt/β-catenin signaling pathways.
Claim 352tool designsupports2018Source 31needs review

The paper presents four strategies for light-inducible activation of TrkA in the absence of NGF.

Here we present the design and evaluation of four strategies for light-inducible activation of TrkA in the absence of NGF. Our strategies involve the light-sensitive protein Arabidopsis cryptochrome 2 and its binding partner CIB1.
Claim 353comparative mechanismsupports2017Source 32needs review

CRY1 and CRY2 differ strongly in their blue-light-induced interaction with the COP1/SPA complex.

In total, our results demonstrate that CRY1 and CRY2 strongly differ in their blue light-induced interaction with the COP1/SPA complex.
Claim 354dependencysupports2017Source 32needs review

The blue-light-induced association between CRY2 and COP1 is not dependent on SPA proteins in vivo.

In contrast, the blue light-induced association between CRY2 and COP1 was not dependent on SPA proteins in vivo.
Claim 355feedback circuitsupports2017Source 33needs review

CRY and BIC form a negative-feedback circuitry that regulates each other's activity.

These results demonstrate a CRY-BIC negative-feedback circuitry that regulates the activity of each other.
Claim 356functionsupports2017Source 34needs review

CRY2 from Arabidopsis thaliana can be used for blue light-dependent spatiotemporal control of protein homo-oligomerization.

cryptochrome 2 (CRY2) from Arabidopsis thaliana has been recently utilized for blue light-dependent spatiotemporal control of protein homo-oligomerization
Claim 357functional determinantsupports2017Source 35needs review

Blue light-dependent phosphorylation of the CCE domain determines the photosensitivity of Arabidopsis CRY2.

Claim 358interaction propertysupports2017Source 36needs review

CRY2 and CIB1 interact upon light illumination.

CRY2 and CIB1, Arabidopsis proteins that interact upon light illumination
Claim 359light dependent interactionsupports2017Source 32needs review

CRY1 and CRY2 form a complex with COP1 only after blue-light exposure and not in dark-grown seedlings.

our in vivo co-immunoprecipitation experiments suggest that CRY1 and CRY2 form a complex with COP1 only after seedlings were exposed to blue light. No association between COP1 and CRY1 or CRY2 was observed in dark-grown seedlings.
Claim 360light dependent regulationsupports2017Source 37needs review

Arabidopsis cryptochrome 2 undergoes blue light-dependent phosphorylation.

Molecular basis for blue light-dependent phosphorylation of Arabidopsis cryptochrome 2
Claim 361mechanistic dependencysupports2017Source 36needs review

The nuclear clearing phenotype depended on the presence of a dimerization domain in CRY2-fused transcriptional activators.

The nuclear clearing phenotype was dependent on the presence of a dimerization domain contained within the CRY2-fused transcriptional activators.
Claim 362mechanistic determinant identificationsupports2017Source 34needs review

The authors identified important determinants for efficient CRY2 clustering.

Here, we identify important determinants for efficient cryptochrome 2 clustering
Claim 363pathway mechanismsupports2017Source 33needs review

Cryptochromes activate BIC gene transcription by suppressing COP1 activity, resulting in activation of HY5 associated with chromatins of the BIC promoters.

by suppressing the activity of CONSTITUTIVE PHOTOMORPHOGENIC 1 (COP1), resulting in activation of the transcription activator ELONGATED HYPOCOTYL 5 (HY5) that is associated with chromatins of the BIC promoters
Claim 364phenotype observationsupports2017Source 36needs review

In mammalian cells, CRY2-tethered proteins showed light-dependent redistribution and clearing within the nucleus.

While adopting this approach to regulate transcription in mammalian cells, we observed light-dependent redistribution and clearing of CRY2-tethered proteins within the nucleus.
Claim 365physiological functionsupports2017Source 33needs review

Photoreceptor co-action in activating BIC transcription may sustain blue light sensitivity of plants under broad spectra of solar radiation in nature.

suggesting a novel photoreceptor co-action mechanism to sustain blue light sensitivity of plants under the broad spectra of solar radiation in nature.
Claim 366reduced affinity interactionsupports2017Source 32needs review

ΔCC-SPA1 interacts with CRY2 with much lower affinity than wild-type SPA1.

Similarly, ΔCC-SPA1 interacted with CRY2, though with a much lower affinity than wild-type SPA1.
Claim 367regulatory mechanismsupports2017Source 33needs review

BIC1 and BIC2 inhibit Arabidopsis cryptochrome function by blocking blue light-dependent cryptochrome dimerization.

two negative regulators of Arabidopsis cryptochromes, Blue light Inhibitors of Cryptochromes 1 and 2 (BIC1 and BIC2), inhibit cryptochrome function by blocking blue light-dependent cryptochrome dimerization
Claim 368toolbox expansionsupports2017Source 34needs review

This work expands the optogenetic clustering toolbox and provides a guideline for designing new CRY2-based optogenetic modules.

Our work not only expands the optogenetic clustering toolbox but also provides a guideline for designing CRY2-based new optogenetic modules.
Claim 369transcriptional regulationsupports2017Source 33needs review

Cryptochromes mediate light activation of transcription of the BIC genes.

Here we show that cryptochromes mediate light activation of transcription of the BIC genes
Claim 370activation mechanismsupports2016Source 38needs review

Arabidopsis cryptochrome 2 undergoes blue light-dependent homodimerization to become physiologically active.

We found that Arabidopsis cryptochrome 2 (CRY2) undergoes blue light-dependent homodimerization to become physiologically active.
Claim 371comparative effectsupports2016Source 13needs review

Opto-PIP3 largely mimicked the maximal effects of insulin stimulation on IRAP-pHluorin translocation, whereas Opto-Akt only partially triggered translocation.

Strikingly, Opto-PIP3 largely mimicked the maximal effects of insulin stimulation, whereas Opto-Akt only partially triggered translocation.
Claim 372comparative effectsupports2016Source 13needs review

Opto-PIP3 largely mimicked the maximal effects of insulin stimulation on IRAP-pHluorin translocation, whereas Opto-Akt only partially triggered translocation.

Strikingly, Opto-PIP3 largely mimicked the maximal effects of insulin stimulation, whereas Opto-Akt only partially triggered translocation.
Claim 373comparative effectsupports2016Source 13needs review

Opto-PIP3 largely mimicked the maximal effects of insulin stimulation on IRAP-pHluorin translocation, whereas Opto-Akt only partially triggered translocation.

Strikingly, Opto-PIP3 largely mimicked the maximal effects of insulin stimulation, whereas Opto-Akt only partially triggered translocation.
Claim 374comparative effectsupports2016Source 13needs review

Opto-PIP3 largely mimicked the maximal effects of insulin stimulation on IRAP-pHluorin translocation, whereas Opto-Akt only partially triggered translocation.

Strikingly, Opto-PIP3 largely mimicked the maximal effects of insulin stimulation, whereas Opto-Akt only partially triggered translocation.
Claim 375comparative effectsupports2016Source 13needs review

Opto-PIP3 largely mimicked the maximal effects of insulin stimulation on IRAP-pHluorin translocation, whereas Opto-Akt only partially triggered translocation.

Strikingly, Opto-PIP3 largely mimicked the maximal effects of insulin stimulation, whereas Opto-Akt only partially triggered translocation.
Claim 376comparative effectsupports2016Source 13needs review

Opto-PIP3 largely mimicked the maximal effects of insulin stimulation on IRAP-pHluorin translocation, whereas Opto-Akt only partially triggered translocation.

Strikingly, Opto-PIP3 largely mimicked the maximal effects of insulin stimulation, whereas Opto-Akt only partially triggered translocation.
Claim 377comparative effectsupports2016Source 13needs review

Opto-PIP3 largely mimicked the maximal effects of insulin stimulation on IRAP-pHluorin translocation, whereas Opto-Akt only partially triggered translocation.

Strikingly, Opto-PIP3 largely mimicked the maximal effects of insulin stimulation, whereas Opto-Akt only partially triggered translocation.
Claim 378expression phenotype associationsupports2016Source 39needs review

CRY2 mRNA expression in human liver tissue samples was directly associated with hepatic triglyceride content.

In human liver tissue samples, CRY2 mRNA expression was directly associated with hepatic triglyceride content.
Claim 379functional hypothesissupports2016Source 39needs review

CRY2 may act as a switch in hepatic fuel metabolism that promotes triglyceride storage and limits glucose production.

Our data may point to CRY2 as a novel switch in hepatic fuel metabolism promoting triglyceride storage and, concomitantly, limiting glucose production.
Claim 380genetic impairmentsupports2016Source 20needs review

Blue light-dependent CRY2 degradation is significantly impaired in the temperature-sensitive cul1 mutant allele axr6-3, especially under non-permissive temperature.

the blue light-dependent CRY2 degradation is significantly impaired in the temperature-sensitive cul1 mutant allele (axr6-3), especially under the non-permissive temperature
Claim 381genetic impairmentsupports2016Source 20needs review

Blue light-dependent CRY2 degradation is significantly impaired in the temperature-sensitive cul1 mutant allele axr6-3, especially under non-permissive temperature.

the blue light-dependent CRY2 degradation is significantly impaired in the temperature-sensitive cul1 mutant allele (axr6-3), especially under the non-permissive temperature
Claim 382genetic impairmentsupports2016Source 20needs review

Blue light-dependent CRY2 degradation is significantly impaired in the temperature-sensitive cul1 mutant allele axr6-3, especially under non-permissive temperature.

the blue light-dependent CRY2 degradation is significantly impaired in the temperature-sensitive cul1 mutant allele (axr6-3), especially under the non-permissive temperature
Claim 383genetic impairmentsupports2016Source 20needs review

Blue light-dependent CRY2 degradation is significantly impaired in the temperature-sensitive cul1 mutant allele axr6-3, especially under non-permissive temperature.

the blue light-dependent CRY2 degradation is significantly impaired in the temperature-sensitive cul1 mutant allele (axr6-3), especially under the non-permissive temperature
Claim 384genetic impairmentsupports2016Source 20needs review

Blue light-dependent CRY2 degradation is significantly impaired in the temperature-sensitive cul1 mutant allele axr6-3, especially under non-permissive temperature.

the blue light-dependent CRY2 degradation is significantly impaired in the temperature-sensitive cul1 mutant allele (axr6-3), especially under the non-permissive temperature
Claim 385genetic impairmentsupports2016Source 20needs review

Blue light-dependent CRY2 degradation is significantly impaired in the temperature-sensitive cul1 mutant allele axr6-3, especially under non-permissive temperature.

the blue light-dependent CRY2 degradation is significantly impaired in the temperature-sensitive cul1 mutant allele (axr6-3), especially under the non-permissive temperature
Claim 386genetic impairmentsupports2016Source 20needs review

Blue light-dependent CRY2 degradation is significantly impaired in the temperature-sensitive cul1 mutant allele axr6-3, especially under non-permissive temperature.

the blue light-dependent CRY2 degradation is significantly impaired in the temperature-sensitive cul1 mutant allele (axr6-3), especially under the non-permissive temperature
Claim 387genotype phenotype associationsupports2016Source 39needs review

Four CRY2 SNPs were associated with fasting glycaemia in non-diabetic individuals.

Four CRY2 SNPs were associated with fasting glycaemia, as reported earlier.
Claim 388genotype phenotype associationsupports2016Source 39needs review

Minor alleles of the CRY2 SNPs associated with fasting glycaemia were associated with elevated fasting glycaemia and reduced liver fat content.

Importantly, carriers of these SNPs' minor alleles revealed elevated fasting glycaemia and, concomitantly, reduced liver fat content.
Claim 389homeostasis hypothesisneutral2016Source 38needs review

The authors hypothesize that regulated dimerization governs homeostasis of active cryptochromes in plants and other evolutionary lineages.

We hypothesize that regulated dimerization governs homeostasis of the active cryptochromes in plants and other evolutionary lineages.
Claim 390inhibitor interactionsupports2016Source 13needs review

Drug-mediated inhibition of Akt only partially dampened the translocation response of Opto-PIP3.

Conversely, drug-mediated inhibition of Akt only partially dampened the translocation response of Opto-PIP3
Claim 391inhibitor interactionsupports2016Source 13needs review

Drug-mediated inhibition of Akt only partially dampened the translocation response of Opto-PIP3.

Conversely, drug-mediated inhibition of Akt only partially dampened the translocation response of Opto-PIP3
Claim 392inhibitor interactionsupports2016Source 13needs review

Drug-mediated inhibition of Akt only partially dampened the translocation response of Opto-PIP3.

Conversely, drug-mediated inhibition of Akt only partially dampened the translocation response of Opto-PIP3
Claim 393inhibitor interactionsupports2016Source 13needs review

Drug-mediated inhibition of Akt only partially dampened the translocation response of Opto-PIP3.

Conversely, drug-mediated inhibition of Akt only partially dampened the translocation response of Opto-PIP3
Claim 394inhibitor interactionsupports2016Source 13needs review

Drug-mediated inhibition of Akt only partially dampened the translocation response of Opto-PIP3.

Conversely, drug-mediated inhibition of Akt only partially dampened the translocation response of Opto-PIP3
Claim 395inhibitor interactionsupports2016Source 13needs review

Drug-mediated inhibition of Akt only partially dampened the translocation response of Opto-PIP3.

Conversely, drug-mediated inhibition of Akt only partially dampened the translocation response of Opto-PIP3
Claim 396inhibitor interactionsupports2016Source 13needs review

Drug-mediated inhibition of Akt only partially dampened the translocation response of Opto-PIP3.

Conversely, drug-mediated inhibition of Akt only partially dampened the translocation response of Opto-PIP3
Claim 397inhibitory interactionsupports2016Source 38needs review

BIC1 binds to CRY2 and suppresses blue light-dependent dimerization, photobody formation, phosphorylation, degradation, and physiological activities of CRY2.

We identified BIC1 (blue-light inhibitor of cryptochromes 1) as an inhibitor of plant cryptochromes that binds to CRY2 to suppress the blue light-dependent dimerization, photobody formation, phosphorylation, degradation, and physiological activities of CRY2.
Claim 398mechanistic attributionsupports2016Source 20needs review

The role of the COP1-SPA1 complex in blue light-dependent CRY2 degradation is more likely attributable to its CUL4-based E3 ubiquitin ligase activity than to its activity as a cryptochrome signaling partner.

the previously reported function of the COP1-SPA1 protein complex in blue light-dependent CRY2 degradation is more likely to be attributable to its cullin 4 (CUL4)-based E3 ubiquitin ligase activity than its activity as the cryptochrome signaling partner
Claim 399mechanistic attributionsupports2016Source 20needs review

The role of the COP1-SPA1 complex in blue light-dependent CRY2 degradation is more likely attributable to its CUL4-based E3 ubiquitin ligase activity than to its activity as a cryptochrome signaling partner.

the previously reported function of the COP1-SPA1 protein complex in blue light-dependent CRY2 degradation is more likely to be attributable to its cullin 4 (CUL4)-based E3 ubiquitin ligase activity than its activity as the cryptochrome signaling partner
Claim 400mechanistic attributionsupports2016Source 20needs review

The role of the COP1-SPA1 complex in blue light-dependent CRY2 degradation is more likely attributable to its CUL4-based E3 ubiquitin ligase activity than to its activity as a cryptochrome signaling partner.

the previously reported function of the COP1-SPA1 protein complex in blue light-dependent CRY2 degradation is more likely to be attributable to its cullin 4 (CUL4)-based E3 ubiquitin ligase activity than its activity as the cryptochrome signaling partner
Claim 401mechanistic attributionsupports2016Source 20needs review

The role of the COP1-SPA1 complex in blue light-dependent CRY2 degradation is more likely attributable to its CUL4-based E3 ubiquitin ligase activity than to its activity as a cryptochrome signaling partner.

the previously reported function of the COP1-SPA1 protein complex in blue light-dependent CRY2 degradation is more likely to be attributable to its cullin 4 (CUL4)-based E3 ubiquitin ligase activity than its activity as the cryptochrome signaling partner
Claim 402mechanistic attributionsupports2016Source 20needs review

The role of the COP1-SPA1 complex in blue light-dependent CRY2 degradation is more likely attributable to its CUL4-based E3 ubiquitin ligase activity than to its activity as a cryptochrome signaling partner.

the previously reported function of the COP1-SPA1 protein complex in blue light-dependent CRY2 degradation is more likely to be attributable to its cullin 4 (CUL4)-based E3 ubiquitin ligase activity than its activity as the cryptochrome signaling partner
Claim 403mechanistic attributionsupports2016Source 20needs review

The role of the COP1-SPA1 complex in blue light-dependent CRY2 degradation is more likely attributable to its CUL4-based E3 ubiquitin ligase activity than to its activity as a cryptochrome signaling partner.

the previously reported function of the COP1-SPA1 protein complex in blue light-dependent CRY2 degradation is more likely to be attributable to its cullin 4 (CUL4)-based E3 ubiquitin ligase activity than its activity as the cryptochrome signaling partner
Claim 404mechanistic attributionsupports2016Source 20needs review

The role of the COP1-SPA1 complex in blue light-dependent CRY2 degradation is more likely attributable to its CUL4-based E3 ubiquitin ligase activity than to its activity as a cryptochrome signaling partner.

the previously reported function of the COP1-SPA1 protein complex in blue light-dependent CRY2 degradation is more likely to be attributable to its cullin 4 (CUL4)-based E3 ubiquitin ligase activity than its activity as the cryptochrome signaling partner
Claim 405mechanistic conclusionsupports2016Source 13needs review

PI3K and Akt play distinct roles in adipocyte insulin action, and PI3K stimulates Akt-independent pathways important for GLUT4 translocation.

Taken together, these results indicate that PI3K and Akt play distinct roles, and that PI3K stimulates Akt-independent pathways that are important for GLUT4 translocation.
Claim 406mechanistic conclusionsupports2016Source 13needs review

PI3K and Akt play distinct roles in adipocyte insulin action, and PI3K stimulates Akt-independent pathways important for GLUT4 translocation.

Taken together, these results indicate that PI3K and Akt play distinct roles, and that PI3K stimulates Akt-independent pathways that are important for GLUT4 translocation.
Claim 407mechanistic conclusionsupports2016Source 13needs review

PI3K and Akt play distinct roles in adipocyte insulin action, and PI3K stimulates Akt-independent pathways important for GLUT4 translocation.

Taken together, these results indicate that PI3K and Akt play distinct roles, and that PI3K stimulates Akt-independent pathways that are important for GLUT4 translocation.
Claim 408mechanistic conclusionsupports2016Source 13needs review

PI3K and Akt play distinct roles in adipocyte insulin action, and PI3K stimulates Akt-independent pathways important for GLUT4 translocation.

Taken together, these results indicate that PI3K and Akt play distinct roles, and that PI3K stimulates Akt-independent pathways that are important for GLUT4 translocation.
Claim 409mechanistic conclusionsupports2016Source 13needs review

PI3K and Akt play distinct roles in adipocyte insulin action, and PI3K stimulates Akt-independent pathways important for GLUT4 translocation.

Taken together, these results indicate that PI3K and Akt play distinct roles, and that PI3K stimulates Akt-independent pathways that are important for GLUT4 translocation.
Claim 410mechanistic conclusionsupports2016Source 13needs review

PI3K and Akt play distinct roles in adipocyte insulin action, and PI3K stimulates Akt-independent pathways important for GLUT4 translocation.

Taken together, these results indicate that PI3K and Akt play distinct roles, and that PI3K stimulates Akt-independent pathways that are important for GLUT4 translocation.
Claim 411mechanistic conclusionsupports2016Source 13needs review

PI3K and Akt play distinct roles in adipocyte insulin action, and PI3K stimulates Akt-independent pathways important for GLUT4 translocation.

Taken together, these results indicate that PI3K and Akt play distinct roles, and that PI3K stimulates Akt-independent pathways that are important for GLUT4 translocation.
Claim 412mechanistic proposalsupports2016Source 20needs review

Photoexcited CRY2 undergoes Lys48-linked polyubiquitination catalyzed by CUL4- and CUL1-based E3 ubiquitin ligases.

we propose that photoexcited CRY2 undergoes Lys48-linked polyubiquitination catalyzed by the CUL4- and CUL1-based E3 ubiquitin ligases
Claim 413mechanistic proposalsupports2016Source 20needs review

Photoexcited CRY2 undergoes Lys48-linked polyubiquitination catalyzed by CUL4- and CUL1-based E3 ubiquitin ligases.

we propose that photoexcited CRY2 undergoes Lys48-linked polyubiquitination catalyzed by the CUL4- and CUL1-based E3 ubiquitin ligases
Claim 414mechanistic proposalsupports2016Source 20needs review

Photoexcited CRY2 undergoes Lys48-linked polyubiquitination catalyzed by CUL4- and CUL1-based E3 ubiquitin ligases.

we propose that photoexcited CRY2 undergoes Lys48-linked polyubiquitination catalyzed by the CUL4- and CUL1-based E3 ubiquitin ligases
Claim 415mechanistic proposalsupports2016Source 20needs review

Photoexcited CRY2 undergoes Lys48-linked polyubiquitination catalyzed by CUL4- and CUL1-based E3 ubiquitin ligases.

we propose that photoexcited CRY2 undergoes Lys48-linked polyubiquitination catalyzed by the CUL4- and CUL1-based E3 ubiquitin ligases
Claim 416mechanistic proposalsupports2016Source 20needs review

Photoexcited CRY2 undergoes Lys48-linked polyubiquitination catalyzed by CUL4- and CUL1-based E3 ubiquitin ligases.

we propose that photoexcited CRY2 undergoes Lys48-linked polyubiquitination catalyzed by the CUL4- and CUL1-based E3 ubiquitin ligases
Claim 417mechanistic proposalsupports2016Source 20needs review

Photoexcited CRY2 undergoes Lys48-linked polyubiquitination catalyzed by CUL4- and CUL1-based E3 ubiquitin ligases.

we propose that photoexcited CRY2 undergoes Lys48-linked polyubiquitination catalyzed by the CUL4- and CUL1-based E3 ubiquitin ligases
Claim 418mechanistic proposalsupports2016Source 20needs review

Photoexcited CRY2 undergoes Lys48-linked polyubiquitination catalyzed by CUL4- and CUL1-based E3 ubiquitin ligases.

we propose that photoexcited CRY2 undergoes Lys48-linked polyubiquitination catalyzed by the CUL4- and CUL1-based E3 ubiquitin ligases
Claim 419negative association resultsupports2016Source 39needs review

The tested clock gene SNPs were not associated with body fat content, insulin sensitivity, or insulin secretion.

None of the tested SNPs was associated with body fat content, insulin sensitivity, or insulin secretion.
Claim 420partial impairmentsupports2016Source 20needs review

Blue light-dependent CRY2 degradation is only partially impaired in cul4, cop1-5 null, and spa1234 mutants, suggesting involvement of additional E3 ubiquitin ligases.

the blue light-dependent CRY2 degradation is only partially impaired in the cul4 mutant, the cop1-5 null mutant and the spa1234 quadruple mutant, suggesting a possible involvement of additional E3 ubiquitin ligases in the regulation of CRY2
Claim 421partial impairmentsupports2016Source 20needs review

Blue light-dependent CRY2 degradation is only partially impaired in cul4, cop1-5 null, and spa1234 mutants, suggesting involvement of additional E3 ubiquitin ligases.

the blue light-dependent CRY2 degradation is only partially impaired in the cul4 mutant, the cop1-5 null mutant and the spa1234 quadruple mutant, suggesting a possible involvement of additional E3 ubiquitin ligases in the regulation of CRY2
Claim 422partial impairmentsupports2016Source 20needs review

Blue light-dependent CRY2 degradation is only partially impaired in cul4, cop1-5 null, and spa1234 mutants, suggesting involvement of additional E3 ubiquitin ligases.

the blue light-dependent CRY2 degradation is only partially impaired in the cul4 mutant, the cop1-5 null mutant and the spa1234 quadruple mutant, suggesting a possible involvement of additional E3 ubiquitin ligases in the regulation of CRY2
Claim 423partial impairmentsupports2016Source 20needs review

Blue light-dependent CRY2 degradation is only partially impaired in cul4, cop1-5 null, and spa1234 mutants, suggesting involvement of additional E3 ubiquitin ligases.

the blue light-dependent CRY2 degradation is only partially impaired in the cul4 mutant, the cop1-5 null mutant and the spa1234 quadruple mutant, suggesting a possible involvement of additional E3 ubiquitin ligases in the regulation of CRY2
Claim 424partial impairmentsupports2016Source 20needs review

Blue light-dependent CRY2 degradation is only partially impaired in cul4, cop1-5 null, and spa1234 mutants, suggesting involvement of additional E3 ubiquitin ligases.

the blue light-dependent CRY2 degradation is only partially impaired in the cul4 mutant, the cop1-5 null mutant and the spa1234 quadruple mutant, suggesting a possible involvement of additional E3 ubiquitin ligases in the regulation of CRY2
Claim 425partial impairmentsupports2016Source 20needs review

Blue light-dependent CRY2 degradation is only partially impaired in cul4, cop1-5 null, and spa1234 mutants, suggesting involvement of additional E3 ubiquitin ligases.

the blue light-dependent CRY2 degradation is only partially impaired in the cul4 mutant, the cop1-5 null mutant and the spa1234 quadruple mutant, suggesting a possible involvement of additional E3 ubiquitin ligases in the regulation of CRY2
Claim 426partial impairmentsupports2016Source 20needs review

Blue light-dependent CRY2 degradation is only partially impaired in cul4, cop1-5 null, and spa1234 mutants, suggesting involvement of additional E3 ubiquitin ligases.

the blue light-dependent CRY2 degradation is only partially impaired in the cul4 mutant, the cop1-5 null mutant and the spa1234 quadruple mutant, suggesting a possible involvement of additional E3 ubiquitin ligases in the regulation of CRY2
Claim 427regulationsupports2016Source 20needs review

Arabidopsis CRY2 undergoes blue light-dependent ubiquitination and 26S proteasome-dependent degradation.

CRY2 undergoes blue light-dependent ubiquitination and 26S proteasome-dependent degradation.
Claim 428regulationsupports2016Source 20needs review

Arabidopsis CRY2 undergoes blue light-dependent ubiquitination and 26S proteasome-dependent degradation.

CRY2 undergoes blue light-dependent ubiquitination and 26S proteasome-dependent degradation.
Claim 429regulationsupports2016Source 20needs review

Arabidopsis CRY2 undergoes blue light-dependent ubiquitination and 26S proteasome-dependent degradation.

CRY2 undergoes blue light-dependent ubiquitination and 26S proteasome-dependent degradation.
Claim 430regulationsupports2016Source 20needs review

Arabidopsis CRY2 undergoes blue light-dependent ubiquitination and 26S proteasome-dependent degradation.

CRY2 undergoes blue light-dependent ubiquitination and 26S proteasome-dependent degradation.
Claim 431regulationsupports2016Source 20needs review

Arabidopsis CRY2 undergoes blue light-dependent ubiquitination and 26S proteasome-dependent degradation.

CRY2 undergoes blue light-dependent ubiquitination and 26S proteasome-dependent degradation.
Claim 432regulationsupports2016Source 20needs review

Arabidopsis CRY2 undergoes blue light-dependent ubiquitination and 26S proteasome-dependent degradation.

CRY2 undergoes blue light-dependent ubiquitination and 26S proteasome-dependent degradation.
Claim 433regulationsupports2016Source 20needs review

Arabidopsis CRY2 undergoes blue light-dependent ubiquitination and 26S proteasome-dependent degradation.

CRY2 undergoes blue light-dependent ubiquitination and 26S proteasome-dependent degradation.
Claim 434requirement negativesupports2016Source 20needs review

ZTL and LKP2 are not required for blue light-dependent CRY2 degradation.

the F-box proteins ZEITLUPE (ZTL) and Lov Kelch Protein2 (LKP2) ... are not required for the blue light-dependent CRY2 degradation
Claim 435requirement negativesupports2016Source 20needs review

ZTL and LKP2 are not required for blue light-dependent CRY2 degradation.

the F-box proteins ZEITLUPE (ZTL) and Lov Kelch Protein2 (LKP2) ... are not required for the blue light-dependent CRY2 degradation
Claim 436requirement negativesupports2016Source 20needs review

ZTL and LKP2 are not required for blue light-dependent CRY2 degradation.

the F-box proteins ZEITLUPE (ZTL) and Lov Kelch Protein2 (LKP2) ... are not required for the blue light-dependent CRY2 degradation
Claim 437requirement negativesupports2016Source 20needs review

ZTL and LKP2 are not required for blue light-dependent CRY2 degradation.

the F-box proteins ZEITLUPE (ZTL) and Lov Kelch Protein2 (LKP2) ... are not required for the blue light-dependent CRY2 degradation
Claim 438requirement negativesupports2016Source 20needs review

ZTL and LKP2 are not required for blue light-dependent CRY2 degradation.

the F-box proteins ZEITLUPE (ZTL) and Lov Kelch Protein2 (LKP2) ... are not required for the blue light-dependent CRY2 degradation
Claim 439requirement negativesupports2016Source 20needs review

ZTL and LKP2 are not required for blue light-dependent CRY2 degradation.

the F-box proteins ZEITLUPE (ZTL) and Lov Kelch Protein2 (LKP2) ... are not required for the blue light-dependent CRY2 degradation
Claim 440requirement negativesupports2016Source 20needs review

ZTL and LKP2 are not required for blue light-dependent CRY2 degradation.

the F-box proteins ZEITLUPE (ZTL) and Lov Kelch Protein2 (LKP2) ... are not required for the blue light-dependent CRY2 degradation
Claim 441spatial localization effectsupports2016Source 13needs review

Focal targeting of Akt to a region of the cell marked sites where IRAP-pHluorin vesicles fused, supporting local Akt-mediated regulation of exocytosis.

In spatial optogenetic studies, focal targeting of Akt to a region of the cell marked the sites where IRAP-pHluorin vesicles fused, supporting the idea that local Akt-mediated signaling regulates exocytosis.
Claim 442spatial localization effectsupports2016Source 13needs review

Focal targeting of Akt to a region of the cell marked sites where IRAP-pHluorin vesicles fused, supporting local Akt-mediated regulation of exocytosis.

In spatial optogenetic studies, focal targeting of Akt to a region of the cell marked the sites where IRAP-pHluorin vesicles fused, supporting the idea that local Akt-mediated signaling regulates exocytosis.
Claim 443spatial localization effectsupports2016Source 13needs review

Focal targeting of Akt to a region of the cell marked sites where IRAP-pHluorin vesicles fused, supporting local Akt-mediated regulation of exocytosis.

In spatial optogenetic studies, focal targeting of Akt to a region of the cell marked the sites where IRAP-pHluorin vesicles fused, supporting the idea that local Akt-mediated signaling regulates exocytosis.
Claim 444spatial localization effectsupports2016Source 13needs review

Focal targeting of Akt to a region of the cell marked sites where IRAP-pHluorin vesicles fused, supporting local Akt-mediated regulation of exocytosis.

In spatial optogenetic studies, focal targeting of Akt to a region of the cell marked the sites where IRAP-pHluorin vesicles fused, supporting the idea that local Akt-mediated signaling regulates exocytosis.
Claim 445spatial localization effectsupports2016Source 13needs review

Focal targeting of Akt to a region of the cell marked sites where IRAP-pHluorin vesicles fused, supporting local Akt-mediated regulation of exocytosis.

In spatial optogenetic studies, focal targeting of Akt to a region of the cell marked the sites where IRAP-pHluorin vesicles fused, supporting the idea that local Akt-mediated signaling regulates exocytosis.
Claim 446spatial localization effectsupports2016Source 13needs review

Focal targeting of Akt to a region of the cell marked sites where IRAP-pHluorin vesicles fused, supporting local Akt-mediated regulation of exocytosis.

In spatial optogenetic studies, focal targeting of Akt to a region of the cell marked the sites where IRAP-pHluorin vesicles fused, supporting the idea that local Akt-mediated signaling regulates exocytosis.
Claim 447spatial localization effectsupports2016Source 13needs review

Focal targeting of Akt to a region of the cell marked sites where IRAP-pHluorin vesicles fused, supporting local Akt-mediated regulation of exocytosis.

In spatial optogenetic studies, focal targeting of Akt to a region of the cell marked the sites where IRAP-pHluorin vesicles fused, supporting the idea that local Akt-mediated signaling regulates exocytosis.
Claim 448tool descriptionsupports2016Source 13needs review

The study describes optogenetic tools based on CRY2 and CIBN that selectively activate PI3K and Akt in time and space in 3T3-L1 adipocytes.

Here, we describe new optogenetic tools based on CRY2 and the N-terminus of CIB1 (CIBN). We used these 'Opto' modules to activate PI3K and Akt selectively in time and space in 3T3-L1 adipocytes.
Claim 449tool descriptionsupports2016Source 13needs review

The study describes optogenetic tools based on CRY2 and CIBN that selectively activate PI3K and Akt in time and space in 3T3-L1 adipocytes.

Here, we describe new optogenetic tools based on CRY2 and the N-terminus of CIB1 (CIBN). We used these 'Opto' modules to activate PI3K and Akt selectively in time and space in 3T3-L1 adipocytes.
Claim 450tool descriptionsupports2016Source 13needs review

The study describes optogenetic tools based on CRY2 and CIBN that selectively activate PI3K and Akt in time and space in 3T3-L1 adipocytes.

Here, we describe new optogenetic tools based on CRY2 and the N-terminus of CIB1 (CIBN). We used these 'Opto' modules to activate PI3K and Akt selectively in time and space in 3T3-L1 adipocytes.
Claim 451tool descriptionsupports2016Source 13needs review

The study describes optogenetic tools based on CRY2 and CIBN that selectively activate PI3K and Akt in time and space in 3T3-L1 adipocytes.

Here, we describe new optogenetic tools based on CRY2 and the N-terminus of CIB1 (CIBN). We used these 'Opto' modules to activate PI3K and Akt selectively in time and space in 3T3-L1 adipocytes.
Claim 452tool descriptionsupports2016Source 13needs review

The study describes optogenetic tools based on CRY2 and CIBN that selectively activate PI3K and Akt in time and space in 3T3-L1 adipocytes.

Here, we describe new optogenetic tools based on CRY2 and the N-terminus of CIB1 (CIBN). We used these 'Opto' modules to activate PI3K and Akt selectively in time and space in 3T3-L1 adipocytes.
Claim 453tool descriptionsupports2016Source 13needs review

The study describes optogenetic tools based on CRY2 and CIBN that selectively activate PI3K and Akt in time and space in 3T3-L1 adipocytes.

Here, we describe new optogenetic tools based on CRY2 and the N-terminus of CIB1 (CIBN). We used these 'Opto' modules to activate PI3K and Akt selectively in time and space in 3T3-L1 adipocytes.
Claim 454tool descriptionsupports2016Source 13needs review

The study describes optogenetic tools based on CRY2 and CIBN that selectively activate PI3K and Akt in time and space in 3T3-L1 adipocytes.

Here, we describe new optogenetic tools based on CRY2 and the N-terminus of CIB1 (CIBN). We used these 'Opto' modules to activate PI3K and Akt selectively in time and space in 3T3-L1 adipocytes.
Claim 455binding mechanismsupports2015Source 40needs review

FBXW7 binds directly to phosphorylated Thr300 of CRY2.

FBXW7 binds directly to phosphorylated Thr300 of CRY2
Claim 456biomarker implicationsupports2015Source 40needs review

Upregulation of CRY2 caused by downregulation of FBXW7 may be a novel prognostic biomarker and therapeutic target in colorectal cancer.

Taken together, our findings indicate that the upregulation of CRY2 caused by downregulation of FBXW7 may be a novel prognostic biomarker and may represent a new therapeutic target in colorectal cancer.
Claim 457capabilitysupports2015Source 41needs review

CRY2 is a powerful optogenetic tool for light-inducible manipulation of signaling pathways and cellular processes in mammalian cells with high spatiotemporal precision and ease of application.

The photoreceptor cryptochrome 2 (CRY2) has become a powerful optogenetic tool that allows light-inducible manipulation of various signaling pathways and cellular processes in mammalian cells with high spatiotemporal precision and ease of application.
Claim 458chemosensitivity effectsupports2015Source 40needs review

High FBXW7 expression downregulates CRY2 and increases colorectal cancer cell sensitivity to chemotherapy.

High FBXW7 expression downregulates CRY2 and increases colorectal cancer cells' sensitivity to chemotherapy.
Claim 459chemosensitivity effectsupports2015Source 40needs review

Knockdown of CRY2 increases colorectal cancer cell sensitivity to oxaliplatin.

Knockdown of CRY2 increased colorectal cancer sensitivity to oxaliplatin in colorectal cancer cells.
Claim 460comparative activitysupports2015Source 41needs review

Membrane-bound CRY2 has drastically enhanced oligomerization activity compared with cytoplasmic CRY2.

Quantitative analysis reveals that membrane-bound CRY2 has drastically enhanced oligomerization activity compared to that of its cytoplasmic form.
Claim 461determinant relationshipsupports2015Source 42needs review

Blue light-dependent phosphorylation of the CCE domain determines the photosensitivity of Arabidopsis CRY2.

The Blue Light-Dependent Phosphorylation of the CCE Domain Determines the Photosensitivity of Arabidopsis CRY2
Claim 462disease associationsupports2015Source 40needs review

CRY2 is overexpressed in chemoresistant colorectal cancer samples.

Here, we report that CRY2 is overexpressed in chemoresistant colorectal cancer samples
Claim 463inverse correlationsupports2015Source 40needs review

Low FBXW7 expression is correlated with high CRY2 expression in colorectal cancer patient samples.

Low FBXW7 expression is correlated with high CRY2 expression in colorectal cancer patient samples.
Claim 464mechanismsupports2015Source 43needs review

CLICR enables optical regulation of target receptor clustering and downstream signalling through noncovalent interactions with engineered Arabidopsis Cry2.

enabled through the optical regulation of target receptor clustering and downstream signalling using noncovalent interactions with engineered Arabidopsis Cryptochrome 2 (Cry2)
Section: abstract
Claim 465mechanismsupports2015Source 41needs review

Photoexcited CRY2 can undergo both homo-oligomerization and heterodimerization with CIB1 under blue light.

the photoexcited CRY2 can both undergo homo-oligomerization and heterodimerization by binding to its dimerization partner CIB1
Claim 466modulationsupports2015Source 41needs review

Recruitment of cytoplasmic CRY2 to the membrane via interaction with membrane-bound CIB1 significantly intensifies CRY2 homo-oligomerization.

the homo-oligomerization of cytoplasmic CRY2 can be significantly intensified by its recruitment to the membrane via interaction with the membrane-bound CIB1
Claim 467molecular interactionsupports2015Source 40needs review

FBXW7 is a novel E3 ubiquitin ligase that targets CRY2 for proteasomal degradation.

We also identify FBXW7 as a novel E3 ubiquitin ligase for targeting CRY2 through proteasomal degradation.
Claim 468post translational regulationsupports2015Source 40needs review

FBXW7 expression promotes CRY2 degradation by enhancing CRY2 ubiquitination and accelerating CRY2 turnover.

FBXW7 expression leads to degradation of CRY2 through enhancing CRY2 ubiquitination and accelerating the CRY2's turnover rate.
Claim 469prognostic associationsupports2015Source 40needs review

CRY2 overexpression is correlated with poor patient survival in colorectal cancer.

CRY2 overexpression is correlated with poor patient survival
Claim 470comparative stabilitysupports2013Source 44needs review

Plant cryptochrome signaling state lifetimes are not, or are only moderately, stabilized in planta relative to other measured contexts.

Thus, the signaling state lifetimes of plant cryptochromes are not, or are only moderately, stabilized in planta.
Claim 471lifetime measurementsupports2013Source 44needs review

The in vivo half-life of the signaling state of Arabidopsis cry2 is about 16 minutes.

we estimate the in vivo half-lives of the signaling states of cry1 and cry2 to be in the range of 5 and 16 min, respectively
signaling state half-life 16 min
Claim 472mechanistic exclusionsupports2013Source 45needs review

Although CRY2 physically interacts with CIB1 in response to blue light, CRY2 is not the photoreceptor mediating blue-light suppression of CIB1 degradation.

although cryptochrome 2 physically interacts with CIB1 in response to blue light, it is not the photoreceptor mediating blue-light suppression of CIB1 degradation
Claim 473mechanistic modelsupports2013Source 45needs review

Cryptochrome and LOV-domain F-box proteins mediate blue-light regulation of the same transcription factor, CIB1, by distinct mechanisms.

These results support the hypothesis that the evolutionarily unrelated blue-light receptors, cryptochrome and LOV-domain F-box proteins, mediate blue-light regulation of the same transcription factor by distinct mechanisms.
Claim 474physical interactionsupports2013Source 45needs review

Photoexcited CRY2 interacts with the transcription factor CIB1 in Arabidopsis in response to blue light.

In Arabidopsis, the photoexcited cryptochrome 2 interacts with the transcription factor CRYPTOCHROME-INTERACTING basic helix-loop-helix 1 (CIB1)
Claim 475tool developmentsupports2013Source 46needs review

The paper describes development of LITEs, an optogenetic two-hybrid system integrating a TALE DNA-binding domain with cryptochrome 2 and CIB1.

Here we describe the development of light-inducible transcriptional effectors (LITEs), an optogenetic two-hybrid system integrating the customizable TALE DNA-binding domain with the light-sensitive cryptochrome 2 protein and its interacting partner CIB1 from Arabidopsis thaliana.
Claim 476genetic regulationsupports2012Source 6needs review

phyA influences cry2 stability because a phyA mutant has enhanced cry2 levels, particularly under low fluence rate blue light.

a phyA mutant had enhanced cry2 levels, particularly under low fluence rate blue light
Claim 477genetic regulationsupports2012Source 6needs review

phyA influences cry2 stability because a phyA mutant has enhanced cry2 levels, particularly under low fluence rate blue light.

a phyA mutant had enhanced cry2 levels, particularly under low fluence rate blue light
Claim 478genetic regulationsupports2012Source 6needs review

phyA influences cry2 stability because a phyA mutant has enhanced cry2 levels, particularly under low fluence rate blue light.

a phyA mutant had enhanced cry2 levels, particularly under low fluence rate blue light
Claim 479genetic regulationsupports2012Source 6needs review

phyA influences cry2 stability because a phyA mutant has enhanced cry2 levels, particularly under low fluence rate blue light.

a phyA mutant had enhanced cry2 levels, particularly under low fluence rate blue light
Claim 480genetic regulationsupports2012Source 6needs review

phyA influences cry2 stability because a phyA mutant has enhanced cry2 levels, particularly under low fluence rate blue light.

a phyA mutant had enhanced cry2 levels, particularly under low fluence rate blue light
Claim 481genetic regulationsupports2012Source 6needs review

phyA influences cry2 stability because a phyA mutant has enhanced cry2 levels, particularly under low fluence rate blue light.

a phyA mutant had enhanced cry2 levels, particularly under low fluence rate blue light
Claim 482genetic regulationsupports2012Source 6needs review

phyA influences cry2 stability because a phyA mutant has enhanced cry2 levels, particularly under low fluence rate blue light.

a phyA mutant had enhanced cry2 levels, particularly under low fluence rate blue light
Claim 483genetic regulationsupports2012Source 6needs review

SPA proteins contribute to cry2 degradation because cry2 degradation under continuous blue light is alleviated in spa mutants in a fluence rate-dependent manner.

In all spa mutants analyzed, cry2 degradation under continuous blue light was alleviated in a fluence rate-dependent manner.
Claim 484genetic regulationsupports2012Source 6needs review

SPA proteins contribute to cry2 degradation because cry2 degradation under continuous blue light is alleviated in spa mutants in a fluence rate-dependent manner.

In all spa mutants analyzed, cry2 degradation under continuous blue light was alleviated in a fluence rate-dependent manner.
Claim 485genetic regulationsupports2012Source 6needs review

SPA proteins contribute to cry2 degradation because cry2 degradation under continuous blue light is alleviated in spa mutants in a fluence rate-dependent manner.

In all spa mutants analyzed, cry2 degradation under continuous blue light was alleviated in a fluence rate-dependent manner.
Claim 486genetic regulationsupports2012Source 6needs review

SPA proteins contribute to cry2 degradation because cry2 degradation under continuous blue light is alleviated in spa mutants in a fluence rate-dependent manner.

In all spa mutants analyzed, cry2 degradation under continuous blue light was alleviated in a fluence rate-dependent manner.
Claim 487genetic regulationsupports2012Source 6needs review

SPA proteins contribute to cry2 degradation because cry2 degradation under continuous blue light is alleviated in spa mutants in a fluence rate-dependent manner.

In all spa mutants analyzed, cry2 degradation under continuous blue light was alleviated in a fluence rate-dependent manner.
Claim 488genetic regulationsupports2012Source 6needs review

SPA proteins contribute to cry2 degradation because cry2 degradation under continuous blue light is alleviated in spa mutants in a fluence rate-dependent manner.

In all spa mutants analyzed, cry2 degradation under continuous blue light was alleviated in a fluence rate-dependent manner.
Claim 489genetic regulationsupports2012Source 6needs review

SPA proteins contribute to cry2 degradation because cry2 degradation under continuous blue light is alleviated in spa mutants in a fluence rate-dependent manner.

In all spa mutants analyzed, cry2 degradation under continuous blue light was alleviated in a fluence rate-dependent manner.
Claim 490overall conclusionsupports2012Source 6needs review

cry2 stability is controlled by SPA and phyA.

Our results suggest that cry2 stability is controlled by SPA and phyA
Claim 491overall conclusionsupports2012Source 6needs review

cry2 stability is controlled by SPA and phyA.

Our results suggest that cry2 stability is controlled by SPA and phyA
Claim 492overall conclusionsupports2012Source 6needs review

cry2 stability is controlled by SPA and phyA.

Our results suggest that cry2 stability is controlled by SPA and phyA
Claim 493overall conclusionsupports2012Source 6needs review

cry2 stability is controlled by SPA and phyA.

Our results suggest that cry2 stability is controlled by SPA and phyA
Claim 494overall conclusionsupports2012Source 6needs review

cry2 stability is controlled by SPA and phyA.

Our results suggest that cry2 stability is controlled by SPA and phyA
Claim 495overall conclusionsupports2012Source 6needs review

cry2 stability is controlled by SPA and phyA.

Our results suggest that cry2 stability is controlled by SPA and phyA
Claim 496overall conclusionsupports2012Source 6needs review

cry2 stability is controlled by SPA and phyA.

Our results suggest that cry2 stability is controlled by SPA and phyA
Claim 497physical interactionsupports2012Source 6needs review

cry2 physically interacts with SPA1 in nuclei of living cells.

Fluorescence resonance energy transfer-fluorescence lifetime imaging microscopy studies showed a robust physical interaction of cry2 with SPA1 in nuclei of living cells.
Claim 498physical interactionsupports2012Source 6needs review

cry2 physically interacts with SPA1 in nuclei of living cells.

Fluorescence resonance energy transfer-fluorescence lifetime imaging microscopy studies showed a robust physical interaction of cry2 with SPA1 in nuclei of living cells.
Claim 499physical interactionsupports2012Source 6needs review

cry2 physically interacts with SPA1 in nuclei of living cells.

Fluorescence resonance energy transfer-fluorescence lifetime imaging microscopy studies showed a robust physical interaction of cry2 with SPA1 in nuclei of living cells.
Claim 500physical interactionsupports2012Source 6needs review

cry2 physically interacts with SPA1 in nuclei of living cells.

Fluorescence resonance energy transfer-fluorescence lifetime imaging microscopy studies showed a robust physical interaction of cry2 with SPA1 in nuclei of living cells.
Claim 501physical interactionsupports2012Source 6needs review

cry2 physically interacts with SPA1 in nuclei of living cells.

Fluorescence resonance energy transfer-fluorescence lifetime imaging microscopy studies showed a robust physical interaction of cry2 with SPA1 in nuclei of living cells.
Claim 502physical interactionsupports2012Source 6needs review

cry2 physically interacts with SPA1 in nuclei of living cells.

Fluorescence resonance energy transfer-fluorescence lifetime imaging microscopy studies showed a robust physical interaction of cry2 with SPA1 in nuclei of living cells.
Claim 503physical interactionsupports2012Source 6needs review

cry2 physically interacts with SPA1 in nuclei of living cells.

Fluorescence resonance energy transfer-fluorescence lifetime imaging microscopy studies showed a robust physical interaction of cry2 with SPA1 in nuclei of living cells.
Claim 504protein degradation processsupports2012Source 6needs review

In etiolated Arabidopsis seedlings exposed to blue light, cry2 protein level strongly decreases and cry2 is phosphorylated, polyubiquitinated, and then degraded by the 26S proteasome.

The cry2 protein level strongly decreases when etiolated seedlings are exposed to blue light; cry2 is first phosphorylated, polyubiquitinated, and then degraded by the 26S proteasome.
Claim 505protein degradation processsupports2012Source 6needs review

In etiolated Arabidopsis seedlings exposed to blue light, cry2 protein level strongly decreases and cry2 is phosphorylated, polyubiquitinated, and then degraded by the 26S proteasome.

The cry2 protein level strongly decreases when etiolated seedlings are exposed to blue light; cry2 is first phosphorylated, polyubiquitinated, and then degraded by the 26S proteasome.
Claim 506protein degradation processsupports2012Source 6needs review

In etiolated Arabidopsis seedlings exposed to blue light, cry2 protein level strongly decreases and cry2 is phosphorylated, polyubiquitinated, and then degraded by the 26S proteasome.

The cry2 protein level strongly decreases when etiolated seedlings are exposed to blue light; cry2 is first phosphorylated, polyubiquitinated, and then degraded by the 26S proteasome.
Claim 507protein degradation processsupports2012Source 6needs review

In etiolated Arabidopsis seedlings exposed to blue light, cry2 protein level strongly decreases and cry2 is phosphorylated, polyubiquitinated, and then degraded by the 26S proteasome.

The cry2 protein level strongly decreases when etiolated seedlings are exposed to blue light; cry2 is first phosphorylated, polyubiquitinated, and then degraded by the 26S proteasome.
Claim 508protein degradation processsupports2012Source 6needs review

In etiolated Arabidopsis seedlings exposed to blue light, cry2 protein level strongly decreases and cry2 is phosphorylated, polyubiquitinated, and then degraded by the 26S proteasome.

The cry2 protein level strongly decreases when etiolated seedlings are exposed to blue light; cry2 is first phosphorylated, polyubiquitinated, and then degraded by the 26S proteasome.
Claim 509protein degradation processsupports2012Source 6needs review

In etiolated Arabidopsis seedlings exposed to blue light, cry2 protein level strongly decreases and cry2 is phosphorylated, polyubiquitinated, and then degraded by the 26S proteasome.

The cry2 protein level strongly decreases when etiolated seedlings are exposed to blue light; cry2 is first phosphorylated, polyubiquitinated, and then degraded by the 26S proteasome.
Claim 510protein degradation processsupports2012Source 6needs review

In etiolated Arabidopsis seedlings exposed to blue light, cry2 protein level strongly decreases and cry2 is phosphorylated, polyubiquitinated, and then degraded by the 26S proteasome.

The cry2 protein level strongly decreases when etiolated seedlings are exposed to blue light; cry2 is first phosphorylated, polyubiquitinated, and then degraded by the 26S proteasome.
Claim 511system basissupports2012Source 47needs review

The blue light-induced transcription system used in this study is based on the blue light-dependent interaction between CRY2 and CIB1.

Here we exploited the blue light-induced transcription system in yeast and zebrafish, based on the blue light dependent interaction between two plant proteins, blue light photoreceptor Cryptochrome 2 (CRY2) and the bHLH transcription factor CIB1 (CRY-interacting bHLH 1).
Claim 512activity changesupports2011Source 48needs review

CRY2 trp-triad mutations tested lost photoreduction activity in vitro but retained physiological and biochemical activities in vivo.

We found that all trp-triad mutations of CRY2 tested lost photoreduction activity in vitro but retained the physiological and biochemical activities in vivo.
Claim 513functional interpretationsupports2011Source 48needs review

The trp-triad residues are evolutionarily conserved in the photolyase/cryptochrome superfamily for structural integrity rather than for photochemistry per se.

the trp-triad residues are evolutionarily conserved in the photolyase/cryptochrome superfamily for reasons of structural integrity rather than for photochemistry per se
Claim 514light responsesupports2011Source 48needs review

Some trp-triad mutations of CRY2 remained responsive to blue light, whereas CRY2(W374A) became constitutively active.

Some of the trp-triad mutations of CRY2 remained responsive to blue light; others, such as CRY2(W374A), became constitutively active.
Claim 515mechanismsupports2011Source 48needs review

Arabidopsis CRY2 functions by a photoactivation mechanism distinct from trp-triad-dependent photoreduction.

These results support the hypothesis that cryptochromes mediate blue-light responses via a photochemistry distinct from trp-triad-dependent photoreduction
Claim 516protein interactionsupports2011Source 48needs review

Wild-type CRY2 undergoes blue-light-dependent interaction with SPA1 and CIB1, whereas CRY2(W374A) interacts with SPA1 and CIB1 constitutively.

In contrast to wild-type CRY2, which undergoes blue-light-dependent interaction with the CRY2-signaling proteins SUPPRESSOR OF PHYA 1 (SPA1) and cryptochrome-interaction basic helix-loop-helix 1 (CIB1), the constitutively active CRY2(W374A) interacts with SPA1 and CIB1 constitutively.
Claim 517degradation responsesupports2010Source 49needs review

Exposure to darkness or blue light induces degradation of CRY2 and subsequently HRT, resulting in susceptibility.

Exposure to darkness or blue-light induces degradation of CRY2, and in turn HRT, resulting in susceptibility.
Claim 518functional requirementsupports2010Source 49needs review

CRY2 and PHOT2 are required for HRT stability and thereby resistance to Turnip Crinkle virus.

The blue-light photoreceptors, cryptochrome (CRY) 2 and phototropin (PHOT) 2, are required for the stability of the R protein HRT, and thereby resistance to Turnip Crinkle virus (TCV).
Claim 519genetic compensationsupports2010Source 49needs review

HRT overexpression compensates for absence of PHOT2 but not absence of CRY2.

Overexpression of HRT can compensate for the absence of PHOT2 but not CRY2.
Claim 520mechanistic modelsupports2010Source 49needs review

CRY2 and PHOT2 negatively regulate proteasome-mediated degradation of HRT, likely via COP1, and blue light relieves this repression resulting in HRT degradation.

We propose that CRY2/PHOT2 negatively regulate the proteasome-mediated degradation of HRT, likely via COP1, and blue-light relieves this repression resulting in HRT degradation.
Claim 521physical interactionsupports2010Source 49needs review

HRT does not directly associate with CRY2 or PHOT2 but does bind COP1.

HRT does not directly associate with either CRY2 or PHOT2 but does bind the CRY2-/PHOT2-interacting E3 ubiquitin ligase, COP1.
Claim 522comparative expressionsupports2009Source 4needs review

Aedes aegypti and Culex quinquefasciatus show conserved circadian expression patterns for all major cycling clock genes except cry2.

they show conserved circadian expression patterns for all major cycling clock genes except mammalian-like cryptochrome2 (cry2)
Claim 523comparative expressionsupports2009Source 4needs review

Aedes aegypti and Culex quinquefasciatus show conserved circadian expression patterns for all major cycling clock genes except cry2.

they show conserved circadian expression patterns for all major cycling clock genes except mammalian-like cryptochrome2 (cry2)
Claim 524comparative expressionsupports2009Source 4needs review

Aedes aegypti and Culex quinquefasciatus show conserved circadian expression patterns for all major cycling clock genes except cry2.

they show conserved circadian expression patterns for all major cycling clock genes except mammalian-like cryptochrome2 (cry2)
Claim 525comparative expressionsupports2009Source 4needs review

Aedes aegypti and Culex quinquefasciatus show conserved circadian expression patterns for all major cycling clock genes except cry2.

they show conserved circadian expression patterns for all major cycling clock genes except mammalian-like cryptochrome2 (cry2)
Claim 526comparative expressionsupports2009Source 4needs review

Aedes aegypti and Culex quinquefasciatus show conserved circadian expression patterns for all major cycling clock genes except cry2.

they show conserved circadian expression patterns for all major cycling clock genes except mammalian-like cryptochrome2 (cry2)
Claim 527comparative expressionsupports2009Source 4needs review

Aedes aegypti and Culex quinquefasciatus show conserved circadian expression patterns for all major cycling clock genes except cry2.

they show conserved circadian expression patterns for all major cycling clock genes except mammalian-like cryptochrome2 (cry2)
Claim 528comparative expressionsupports2009Source 4needs review

Aedes aegypti and Culex quinquefasciatus show conserved circadian expression patterns for all major cycling clock genes except cry2.

they show conserved circadian expression patterns for all major cycling clock genes except mammalian-like cryptochrome2 (cry2)
Claim 529degradation comparisonsupports2009Source 50needs review

CRY2-GFP degradation is significantly retarded in response to blue light compared with GFP-CRY2 or endogenous CRY2.

Compared with GFP-CRY2 or the endogenous CRY2, CRY2-GFP degradation was significantly retarded in response to blue light
Claim 530functional activity comparisonsupports2009Source 50needs review

GFP-CRY2 exhibits light-dependent biochemical and physiological activities similar to endogenous CRY2.

While GFP-CRY2 exerts light-dependent biochemical and physiological activities similar to those of the endogenous CRY2
Claim 531hypothesized behavioral rolesupports2009Source 4needs review

Differences in cry2 mRNA profiles correlate with behavioral differences between Aedes aegypti and Culex quinquefasciatus and suggest a potential role for cry2 in species-specific rhythmic behavior.

the correlation between the differences in behavior between Ae. aegypti and Cx. quinquefasciatus and their corresponding cry2 mRNA profiles suggests a potential role for this clock gene in controlling species-specific rhythmic behavior
Claim 532hypothesized behavioral rolesupports2009Source 4needs review

Differences in cry2 mRNA profiles correlate with behavioral differences between Aedes aegypti and Culex quinquefasciatus and suggest a potential role for cry2 in species-specific rhythmic behavior.

the correlation between the differences in behavior between Ae. aegypti and Cx. quinquefasciatus and their corresponding cry2 mRNA profiles suggests a potential role for this clock gene in controlling species-specific rhythmic behavior
Claim 533hypothesized behavioral rolesupports2009Source 4needs review

Differences in cry2 mRNA profiles correlate with behavioral differences between Aedes aegypti and Culex quinquefasciatus and suggest a potential role for cry2 in species-specific rhythmic behavior.

the correlation between the differences in behavior between Ae. aegypti and Cx. quinquefasciatus and their corresponding cry2 mRNA profiles suggests a potential role for this clock gene in controlling species-specific rhythmic behavior
Claim 534hypothesized behavioral rolesupports2009Source 4needs review

Differences in cry2 mRNA profiles correlate with behavioral differences between Aedes aegypti and Culex quinquefasciatus and suggest a potential role for cry2 in species-specific rhythmic behavior.

the correlation between the differences in behavior between Ae. aegypti and Cx. quinquefasciatus and their corresponding cry2 mRNA profiles suggests a potential role for this clock gene in controlling species-specific rhythmic behavior
Claim 535hypothesized behavioral rolesupports2009Source 4needs review

Differences in cry2 mRNA profiles correlate with behavioral differences between Aedes aegypti and Culex quinquefasciatus and suggest a potential role for cry2 in species-specific rhythmic behavior.

the correlation between the differences in behavior between Ae. aegypti and Cx. quinquefasciatus and their corresponding cry2 mRNA profiles suggests a potential role for this clock gene in controlling species-specific rhythmic behavior
Claim 536hypothesized behavioral rolesupports2009Source 4needs review

Differences in cry2 mRNA profiles correlate with behavioral differences between Aedes aegypti and Culex quinquefasciatus and suggest a potential role for cry2 in species-specific rhythmic behavior.

the correlation between the differences in behavior between Ae. aegypti and Cx. quinquefasciatus and their corresponding cry2 mRNA profiles suggests a potential role for this clock gene in controlling species-specific rhythmic behavior
Claim 537hypothesized behavioral rolesupports2009Source 4needs review

Differences in cry2 mRNA profiles correlate with behavioral differences between Aedes aegypti and Culex quinquefasciatus and suggest a potential role for cry2 in species-specific rhythmic behavior.

the correlation between the differences in behavior between Ae. aegypti and Cx. quinquefasciatus and their corresponding cry2 mRNA profiles suggests a potential role for this clock gene in controlling species-specific rhythmic behavior
Claim 538mechanistic interpretationsupports2009Source 50needs review

The results are consistent with the hypothesis that photoexcited CRY2 disengages its C-terminal domain from the PHR domain to become active.

These results are consistent with the hypothesis that photoexcited CRY2 disengages its C-terminal domain from the PHR domain to become active.
Claim 539regulatory differencesupports2009Source 4needs review

Different mechanisms for cry2 regulation may exist in Aedes aegypti and Culex quinquefasciatus.

The results indicate that different mechanisms for cry2 regulation may exist for the two species.
Claim 540regulatory differencesupports2009Source 4needs review

Different mechanisms for cry2 regulation may exist in Aedes aegypti and Culex quinquefasciatus.

The results indicate that different mechanisms for cry2 regulation may exist for the two species.
Claim 541regulatory differencesupports2009Source 4needs review

Different mechanisms for cry2 regulation may exist in Aedes aegypti and Culex quinquefasciatus.

The results indicate that different mechanisms for cry2 regulation may exist for the two species.
Claim 542regulatory differencesupports2009Source 4needs review

Different mechanisms for cry2 regulation may exist in Aedes aegypti and Culex quinquefasciatus.

The results indicate that different mechanisms for cry2 regulation may exist for the two species.
Claim 543regulatory differencesupports2009Source 4needs review

Different mechanisms for cry2 regulation may exist in Aedes aegypti and Culex quinquefasciatus.

The results indicate that different mechanisms for cry2 regulation may exist for the two species.
Claim 544regulatory differencesupports2009Source 4needs review

Different mechanisms for cry2 regulation may exist in Aedes aegypti and Culex quinquefasciatus.

The results indicate that different mechanisms for cry2 regulation may exist for the two species.
Claim 545regulatory differencesupports2009Source 4needs review

Different mechanisms for cry2 regulation may exist in Aedes aegypti and Culex quinquefasciatus.

The results indicate that different mechanisms for cry2 regulation may exist for the two species.
Claim 546subcellular localization behaviorsupports2009Source 50needs review

Both GFP-CRY2 and endogenous CRY2 form nuclear bodies in the presence of 26S-proteasome inhibitors that block blue light-dependent CRY2 degradation.

we showed that both GFP-CRY2 and endogenous CRY2 formed nuclear bodies in the presence of the 26S-proteasome inhibitors that block blue light-dependent CRY2 degradation
Claim 547functional rolesupports2008Source 51needs review

CIB1 acts together with additional CIB1-related proteins to promote CRY2-dependent floral initiation.

it acts together with additional CIB1-related proteins to promote CRY2-dependent floral initiation
Claim 548interactionsupports2008Source 51needs review

CIB1 interacts with CRY2 in a blue light-specific manner.

CIB1 interacts with CRY2 (cryptochrome 2) in a blue light-specific manner in yeast and Arabidopsis cells
Claim 549mechanistic modelsupports2008Source 51needs review

Blue light-dependent interaction of cryptochrome(s) with CIB1 and CIB1-related proteins represents an early photoreceptor signaling mechanism in plants.

We propose that the blue light-dependent interaction of cryptochrome(s) with CIB1 and CIB1-related proteins represents an early photoreceptor signaling mechanism in plants.
Claim 550active state compositionsupports2007Source 52needs review

The active form of Cry2 contains FADH(.) rather than the fully reduced flavin state required for catalytically active photolyase.

These results demonstrate that the active form of Cry2 contains FADH(.) (whereas catalytically active photolyase requires fully reduced flavin (FADH(-))).
Claim 551activity statesupports2007Source 7needs review

The GUS-NC80 fusion protein expressed in transgenic plants is constitutively active but unphosphorylated.

The GUS-NC80 fusion protein expressed in transgenic plants is constitutively active but unphosphorylated
Claim 552activity statesupports2007Source 7needs review

The GUS-NC80 fusion protein expressed in transgenic plants is constitutively active but unphosphorylated.

The GUS-NC80 fusion protein expressed in transgenic plants is constitutively active but unphosphorylated
Claim 553activity statesupports2007Source 7needs review

The GUS-NC80 fusion protein expressed in transgenic plants is constitutively active but unphosphorylated.

The GUS-NC80 fusion protein expressed in transgenic plants is constitutively active but unphosphorylated
Claim 554activity statesupports2007Source 7needs review

The GUS-NC80 fusion protein expressed in transgenic plants is constitutively active but unphosphorylated.

The GUS-NC80 fusion protein expressed in transgenic plants is constitutively active but unphosphorylated
Claim 555activity statesupports2007Source 7needs review

The GUS-NC80 fusion protein expressed in transgenic plants is constitutively active but unphosphorylated.

The GUS-NC80 fusion protein expressed in transgenic plants is constitutively active but unphosphorylated
Claim 556activity statesupports2007Source 7needs review

The GUS-NC80 fusion protein expressed in transgenic plants is constitutively active but unphosphorylated.

The GUS-NC80 fusion protein expressed in transgenic plants is constitutively active but unphosphorylated
Claim 557activity statesupports2007Source 7needs review

The GUS-NC80 fusion protein expressed in transgenic plants is constitutively active but unphosphorylated.

The GUS-NC80 fusion protein expressed in transgenic plants is constitutively active but unphosphorylated
Claim 558evolutionary historysupports2007Source 53needs review

At least two rounds of gene duplication at the base of the metazoan radiation, together with several losses, gave rise to two cryptochrome gene families in insects: a Drosophila-like cry1 family and a vertebrate-like cry2 family.

Phylogenetic analyses show at least 2 rounds of gene duplication at the base of the metazoan radiation, as well as several losses, gave rise to 2 cryptochrome (cry) gene families in insects, a Drosophila-like cry1 gene family and a vertebrate-like cry2 family.
Claim 559evolutionary inferencesupports2007Source 53needs review

The transcriptional repressive function of insect CRY2 descended from a light-sensitive photolyase-like ancestral gene that probably lacked the ability to repress CLOCK:CYCLE-mediated transcription.

By mapping the functional data onto a cryptochrome/6-4 photolyase gene tree, we find that the transcriptional repressive function of insect CRY2 descended from a light-sensitive photolyase-like ancestral gene, probably lacking the ability to repress CLOCK:CYCLE-mediated transcription.
Claim 560functional differencesupports2007Source 52needs review

Cryptochromes may use flavin redox states for signaling differently from DNA-photolyase for photorepair.

suggest that cryptochromes could represent photoreceptors using flavin redox states for signaling differently from DNA-photolyase for photorepair
Claim 561functional extensionsupports2007Source 53needs review

This study extended the transcriptional repressive function of insect CRY2 to Hymenoptera and Coleoptera, including Apis mellifera, Bombus impatiens, and Tribolium castaneum.

Here, we extended the transcriptional repressive function of insect CRY2 to 2 orders--Hymenoptera (the honeybee Apis mellifera and the bumblebee Bombus impatiens) and Coleoptera (the red flour beetle Tribolium castaneum).
Claim 562functional propertysupports2007Source 53needs review

Previous studies showed that insect CRY1 is photosensitive, whereas photo-insensitive CRY2 potently inhibits CLOCK:CYCLE-mediated transcription.

Previous studies have shown that insect CRY1 is photosensitive, whereas photo-insensitive CRY2 functions to potently inhibit clock-relevant CLOCK:CYCLE-mediated transcription.
Claim 563functional sufficiencysupports2007Source 7needs review

The 80-residue NC80 motif was sufficient to confer the physiological function of CRY2.

Our results showed that an 80-residue motif, referred to as NC80, was sufficient to confer the physiological function of CRY2.
Claim 564functional sufficiencysupports2007Source 7needs review

The 80-residue NC80 motif was sufficient to confer the physiological function of CRY2.

Our results showed that an 80-residue motif, referred to as NC80, was sufficient to confer the physiological function of CRY2.
Claim 565functional sufficiencysupports2007Source 7needs review

The 80-residue NC80 motif was sufficient to confer the physiological function of CRY2.

Our results showed that an 80-residue motif, referred to as NC80, was sufficient to confer the physiological function of CRY2.
Claim 566functional sufficiencysupports2007Source 7needs review

The 80-residue NC80 motif was sufficient to confer the physiological function of CRY2.

Our results showed that an 80-residue motif, referred to as NC80, was sufficient to confer the physiological function of CRY2.
Claim 567functional sufficiencysupports2007Source 7needs review

The 80-residue NC80 motif was sufficient to confer the physiological function of CRY2.

Our results showed that an 80-residue motif, referred to as NC80, was sufficient to confer the physiological function of CRY2.
Claim 568functional sufficiencysupports2007Source 7needs review

The 80-residue NC80 motif was sufficient to confer the physiological function of CRY2.

Our results showed that an 80-residue motif, referred to as NC80, was sufficient to confer the physiological function of CRY2.
Claim 569functional sufficiencysupports2007Source 7needs review

The 80-residue NC80 motif was sufficient to confer the physiological function of CRY2.

Our results showed that an 80-residue motif, referred to as NC80, was sufficient to confer the physiological function of CRY2.
Claim 570light response modulationsupports2007Source 52needs review

Green light irradiation of Cry2 changes the equilibrium of flavin oxidation states and attenuates Cry2-controlled responses such as flowering.

Green light irradiation of Cry2 causes a change in the equilibrium of flavin oxidation states and attenuates Cry2-controlled responses such as flowering.
Claim 571light sensitivitysupports2007Source 53needs review

Bee and beetle CRY2 proteins are not light sensitive in culture, in either protein degradation or inhibitory transcriptional response.

Importantly, the bee and beetle CRY2 proteins are not light sensitive in culture, in either degradation of protein levels or inhibitory transcriptional response
Claim 572mechanistic inferencesupports2007Source 7needs review

Blue light-induced CRY2 phosphorylation likely causes a conformational change that derepresses the NC80 motif.

suggesting that the blue light-induced CRY2 phosphorylation causes a conformational change to derepress the NC80 motif
Claim 573mechanistic inferencesupports2007Source 7needs review

Blue light-induced CRY2 phosphorylation likely causes a conformational change that derepresses the NC80 motif.

suggesting that the blue light-induced CRY2 phosphorylation causes a conformational change to derepress the NC80 motif
Claim 574mechanistic inferencesupports2007Source 7needs review

Blue light-induced CRY2 phosphorylation likely causes a conformational change that derepresses the NC80 motif.

suggesting that the blue light-induced CRY2 phosphorylation causes a conformational change to derepress the NC80 motif
Claim 575mechanistic inferencesupports2007Source 7needs review

Blue light-induced CRY2 phosphorylation likely causes a conformational change that derepresses the NC80 motif.

suggesting that the blue light-induced CRY2 phosphorylation causes a conformational change to derepress the NC80 motif
Claim 576mechanistic inferencesupports2007Source 7needs review

Blue light-induced CRY2 phosphorylation likely causes a conformational change that derepresses the NC80 motif.

suggesting that the blue light-induced CRY2 phosphorylation causes a conformational change to derepress the NC80 motif
Claim 577mechanistic inferencesupports2007Source 7needs review

Blue light-induced CRY2 phosphorylation likely causes a conformational change that derepresses the NC80 motif.

suggesting that the blue light-induced CRY2 phosphorylation causes a conformational change to derepress the NC80 motif
Claim 578mechanistic inferencesupports2007Source 7needs review

Blue light-induced CRY2 phosphorylation likely causes a conformational change that derepresses the NC80 motif.

suggesting that the blue light-induced CRY2 phosphorylation causes a conformational change to derepress the NC80 motif
Claim 579photocycle statesupports2007Source 52needs review

Arabidopsis Cry2 undergoes a photocycle in which semireduced flavin FADH(.) accumulates upon blue light irradiation.

Here we have shown that Arabidopsis Cry2 undergoes a photocycle in which semireduced flavin (FADH(.)) accumulates upon blue light irradiation.
Claim 580requirement for phosphorylationsupports2007Source 7needs review

The CRY2 C-terminal tail is required for blue light-induced CRY2 phosphorylation but not for CRY2 activity.

the CRY2 C-terminal tail was found to be required for the blue light-induced CRY2 phosphorylation but not for the CRY2 activity
Claim 581requirement for phosphorylationsupports2007Source 7needs review

The CRY2 C-terminal tail is required for blue light-induced CRY2 phosphorylation but not for CRY2 activity.

the CRY2 C-terminal tail was found to be required for the blue light-induced CRY2 phosphorylation but not for the CRY2 activity
Claim 582requirement for phosphorylationsupports2007Source 7needs review

The CRY2 C-terminal tail is required for blue light-induced CRY2 phosphorylation but not for CRY2 activity.

the CRY2 C-terminal tail was found to be required for the blue light-induced CRY2 phosphorylation but not for the CRY2 activity
Claim 583requirement for phosphorylationsupports2007Source 7needs review

The CRY2 C-terminal tail is required for blue light-induced CRY2 phosphorylation but not for CRY2 activity.

the CRY2 C-terminal tail was found to be required for the blue light-induced CRY2 phosphorylation but not for the CRY2 activity
Claim 584requirement for phosphorylationsupports2007Source 7needs review

The CRY2 C-terminal tail is required for blue light-induced CRY2 phosphorylation but not for CRY2 activity.

the CRY2 C-terminal tail was found to be required for the blue light-induced CRY2 phosphorylation but not for the CRY2 activity
Claim 585requirement for phosphorylationsupports2007Source 7needs review

The CRY2 C-terminal tail is required for blue light-induced CRY2 phosphorylation but not for CRY2 activity.

the CRY2 C-terminal tail was found to be required for the blue light-induced CRY2 phosphorylation but not for the CRY2 activity
Claim 586requirement for phosphorylationsupports2007Source 7needs review

The CRY2 C-terminal tail is required for blue light-induced CRY2 phosphorylation but not for CRY2 activity.

the CRY2 C-terminal tail was found to be required for the blue light-induced CRY2 phosphorylation but not for the CRY2 activity
Claim 587structural modelsupports2007Source 7needs review

In unphosphorylated CRY2, the PHR domain and C-terminal tail form a closed conformation that suppresses the NC80 motif, whereas blue light-induced phosphorylation promotes an open conformation that derepresses NC80 and triggers signal transduction.

We propose that the PHR domain and the C-terminal tail of the unphosphorylated CRY2 form a "closed" conformation to suppress the NC80 motif in the absence of light. In response to blue light, the C-terminal tail of CRY2 is phosphorylated and electrostatically repelled from the surface of the PHR domain to form an "open" conformation, resulting in derepression of the NC80 motif and signal transduction to trigger photomorphogenic responses.
Claim 588structural modelsupports2007Source 7needs review

In unphosphorylated CRY2, the PHR domain and C-terminal tail form a closed conformation that suppresses the NC80 motif, whereas blue light-induced phosphorylation promotes an open conformation that derepresses NC80 and triggers signal transduction.

We propose that the PHR domain and the C-terminal tail of the unphosphorylated CRY2 form a "closed" conformation to suppress the NC80 motif in the absence of light. In response to blue light, the C-terminal tail of CRY2 is phosphorylated and electrostatically repelled from the surface of the PHR domain to form an "open" conformation, resulting in derepression of the NC80 motif and signal transduction to trigger photomorphogenic responses.
Claim 589structural modelsupports2007Source 7needs review

In unphosphorylated CRY2, the PHR domain and C-terminal tail form a closed conformation that suppresses the NC80 motif, whereas blue light-induced phosphorylation promotes an open conformation that derepresses NC80 and triggers signal transduction.

We propose that the PHR domain and the C-terminal tail of the unphosphorylated CRY2 form a "closed" conformation to suppress the NC80 motif in the absence of light. In response to blue light, the C-terminal tail of CRY2 is phosphorylated and electrostatically repelled from the surface of the PHR domain to form an "open" conformation, resulting in derepression of the NC80 motif and signal transduction to trigger photomorphogenic responses.
Claim 590structural modelsupports2007Source 7needs review

In unphosphorylated CRY2, the PHR domain and C-terminal tail form a closed conformation that suppresses the NC80 motif, whereas blue light-induced phosphorylation promotes an open conformation that derepresses NC80 and triggers signal transduction.

We propose that the PHR domain and the C-terminal tail of the unphosphorylated CRY2 form a "closed" conformation to suppress the NC80 motif in the absence of light. In response to blue light, the C-terminal tail of CRY2 is phosphorylated and electrostatically repelled from the surface of the PHR domain to form an "open" conformation, resulting in derepression of the NC80 motif and signal transduction to trigger photomorphogenic responses.
Claim 591structural modelsupports2007Source 7needs review

In unphosphorylated CRY2, the PHR domain and C-terminal tail form a closed conformation that suppresses the NC80 motif, whereas blue light-induced phosphorylation promotes an open conformation that derepresses NC80 and triggers signal transduction.

We propose that the PHR domain and the C-terminal tail of the unphosphorylated CRY2 form a "closed" conformation to suppress the NC80 motif in the absence of light. In response to blue light, the C-terminal tail of CRY2 is phosphorylated and electrostatically repelled from the surface of the PHR domain to form an "open" conformation, resulting in derepression of the NC80 motif and signal transduction to trigger photomorphogenic responses.
Claim 592structural modelsupports2007Source 7needs review

In unphosphorylated CRY2, the PHR domain and C-terminal tail form a closed conformation that suppresses the NC80 motif, whereas blue light-induced phosphorylation promotes an open conformation that derepresses NC80 and triggers signal transduction.

We propose that the PHR domain and the C-terminal tail of the unphosphorylated CRY2 form a "closed" conformation to suppress the NC80 motif in the absence of light. In response to blue light, the C-terminal tail of CRY2 is phosphorylated and electrostatically repelled from the surface of the PHR domain to form an "open" conformation, resulting in derepression of the NC80 motif and signal transduction to trigger photomorphogenic responses.
Claim 593structural modelsupports2007Source 7needs review

In unphosphorylated CRY2, the PHR domain and C-terminal tail form a closed conformation that suppresses the NC80 motif, whereas blue light-induced phosphorylation promotes an open conformation that derepresses NC80 and triggers signal transduction.

We propose that the PHR domain and the C-terminal tail of the unphosphorylated CRY2 form a "closed" conformation to suppress the NC80 motif in the absence of light. In response to blue light, the C-terminal tail of CRY2 is phosphorylated and electrostatically repelled from the surface of the PHR domain to form an "open" conformation, resulting in derepression of the NC80 motif and signal transduction to trigger photomorphogenic responses.
Claim 594associationsupports2004Source 11needs review

CRY2 DNA sequences show strong linkage disequilibrium and two highly differentiated haplogroups, A and B, across the gene.

CRY2 DNA sequences reveal strong LD and the existence of two highly differentiated haplogroups (A and B) across the gene
Claim 595associationsupports2004Source 11needs review

CRY2 DNA sequences show strong linkage disequilibrium and two highly differentiated haplogroups, A and B, across the gene.

CRY2 DNA sequences reveal strong LD and the existence of two highly differentiated haplogroups (A and B) across the gene
Claim 596associationsupports2004Source 11needs review

CRY2 DNA sequences show strong linkage disequilibrium and two highly differentiated haplogroups, A and B, across the gene.

CRY2 DNA sequences reveal strong LD and the existence of two highly differentiated haplogroups (A and B) across the gene
Claim 597associationsupports2004Source 11needs review

CRY2 DNA sequences show strong linkage disequilibrium and two highly differentiated haplogroups, A and B, across the gene.

CRY2 DNA sequences reveal strong LD and the existence of two highly differentiated haplogroups (A and B) across the gene
Claim 598associationsupports2004Source 11needs review

CRY2 DNA sequences show strong linkage disequilibrium and two highly differentiated haplogroups, A and B, across the gene.

CRY2 DNA sequences reveal strong LD and the existence of two highly differentiated haplogroups (A and B) across the gene
Claim 599associationsupports2004Source 11needs review

CRY2 DNA sequences show strong linkage disequilibrium and two highly differentiated haplogroups, A and B, across the gene.

CRY2 DNA sequences reveal strong LD and the existence of two highly differentiated haplogroups (A and B) across the gene
Claim 600associationsupports2004Source 11needs review

CRY2 DNA sequences show strong linkage disequilibrium and two highly differentiated haplogroups, A and B, across the gene.

CRY2 DNA sequences reveal strong LD and the existence of two highly differentiated haplogroups (A and B) across the gene
Claim 601associationsupports2004Source 11needs review

Under short-day photoperiod, the AS and B CRY2 haplogroups are highly significantly associated with early flowering in an unstratified population of 95 Arabidopsis ecotypes.

Growth chamber and field experiments using an unstratified population of 95 ecotypes indicate that under short-day photoperiod, the AS and B haplogroups are both highly significantly associated with early flowering
population size 95
Claim 602associationsupports2004Source 11needs review

Under short-day photoperiod, the AS and B CRY2 haplogroups are highly significantly associated with early flowering in an unstratified population of 95 Arabidopsis ecotypes.

Growth chamber and field experiments using an unstratified population of 95 ecotypes indicate that under short-day photoperiod, the AS and B haplogroups are both highly significantly associated with early flowering
population size 95
Claim 603associationsupports2004Source 11needs review

Under short-day photoperiod, the AS and B CRY2 haplogroups are highly significantly associated with early flowering in an unstratified population of 95 Arabidopsis ecotypes.

Growth chamber and field experiments using an unstratified population of 95 ecotypes indicate that under short-day photoperiod, the AS and B haplogroups are both highly significantly associated with early flowering
population size 95
Claim 604associationsupports2004Source 11needs review

Under short-day photoperiod, the AS and B CRY2 haplogroups are highly significantly associated with early flowering in an unstratified population of 95 Arabidopsis ecotypes.

Growth chamber and field experiments using an unstratified population of 95 ecotypes indicate that under short-day photoperiod, the AS and B haplogroups are both highly significantly associated with early flowering
population size 95
Claim 605associationsupports2004Source 11needs review

Under short-day photoperiod, the AS and B CRY2 haplogroups are highly significantly associated with early flowering in an unstratified population of 95 Arabidopsis ecotypes.

Growth chamber and field experiments using an unstratified population of 95 ecotypes indicate that under short-day photoperiod, the AS and B haplogroups are both highly significantly associated with early flowering
population size 95
Claim 606associationsupports2004Source 11needs review

Under short-day photoperiod, the AS and B CRY2 haplogroups are highly significantly associated with early flowering in an unstratified population of 95 Arabidopsis ecotypes.

Growth chamber and field experiments using an unstratified population of 95 ecotypes indicate that under short-day photoperiod, the AS and B haplogroups are both highly significantly associated with early flowering
population size 95
Claim 607associationsupports2004Source 11needs review

Under short-day photoperiod, the AS and B CRY2 haplogroups are highly significantly associated with early flowering in an unstratified population of 95 Arabidopsis ecotypes.

Growth chamber and field experiments using an unstratified population of 95 ecotypes indicate that under short-day photoperiod, the AS and B haplogroups are both highly significantly associated with early flowering
population size 95
Claim 608causal inferencesupports2004Source 11needs review

The serine substitution in CRY2 is strongly suggested to be directly responsible for the AS early flowering phenotype.

the AS haplogroup is characterized almost exclusively by the nucleotide polymorphisms directly associated with the serine replacement in CRY2; this finding strongly suggests that the serine substitution is directly responsible for the AS early flowering phenotype
Claim 609causal inferencesupports2004Source 11needs review

The serine substitution in CRY2 is strongly suggested to be directly responsible for the AS early flowering phenotype.

the AS haplogroup is characterized almost exclusively by the nucleotide polymorphisms directly associated with the serine replacement in CRY2; this finding strongly suggests that the serine substitution is directly responsible for the AS early flowering phenotype
Claim 610causal inferencesupports2004Source 11needs review

The serine substitution in CRY2 is strongly suggested to be directly responsible for the AS early flowering phenotype.

the AS haplogroup is characterized almost exclusively by the nucleotide polymorphisms directly associated with the serine replacement in CRY2; this finding strongly suggests that the serine substitution is directly responsible for the AS early flowering phenotype
Claim 611causal inferencesupports2004Source 11needs review

The serine substitution in CRY2 is strongly suggested to be directly responsible for the AS early flowering phenotype.

the AS haplogroup is characterized almost exclusively by the nucleotide polymorphisms directly associated with the serine replacement in CRY2; this finding strongly suggests that the serine substitution is directly responsible for the AS early flowering phenotype
Claim 612causal inferencesupports2004Source 11needs review

The serine substitution in CRY2 is strongly suggested to be directly responsible for the AS early flowering phenotype.

the AS haplogroup is characterized almost exclusively by the nucleotide polymorphisms directly associated with the serine replacement in CRY2; this finding strongly suggests that the serine substitution is directly responsible for the AS early flowering phenotype
Claim 613causal inferencesupports2004Source 11needs review

The serine substitution in CRY2 is strongly suggested to be directly responsible for the AS early flowering phenotype.

the AS haplogroup is characterized almost exclusively by the nucleotide polymorphisms directly associated with the serine replacement in CRY2; this finding strongly suggests that the serine substitution is directly responsible for the AS early flowering phenotype
Claim 614causal inferencesupports2004Source 11needs review

The serine substitution in CRY2 is strongly suggested to be directly responsible for the AS early flowering phenotype.

the AS haplogroup is characterized almost exclusively by the nucleotide polymorphisms directly associated with the serine replacement in CRY2; this finding strongly suggests that the serine substitution is directly responsible for the AS early flowering phenotype
Claim 615functional effectsupports2004Source 54needs review

Overexpression of tomato CRY2 causes hypocotyl and internode shortening under both low- and high-fluence blue light.

Tomato CRY2 overexpressors show phenotypes similar to but distinct from their Arabidopsis counterparts (hypocotyl and internode shortening under both low- and high-fluence blue light)
Claim 616functional effectsupports2004Source 54needs review

Overexpression of tomato CRY2 delays flowering under both short-day and long-day conditions and increases axillary branch outgrowth.

CRY2 overexpression causes an unexpected delay in flowering, observed under both short- and long-day conditions, and an increased outgrowth of axillary branches.
Claim 617functional effectsupports2004Source 54needs review

Overexpression of tomato CRY2 produces a high-pigment phenotype with overproduction of anthocyanins and chlorophyll in leaves and flavonoids and lycopene in fruits.

but also several novel ones, including a high-pigment phenotype, resulting in overproduction of anthocyanins and chlorophyll in leaves and of flavonoids and lycopene in fruits
Claim 618functional effectsupports2004Source 54needs review

Virus-induced gene silencing of CRY2 in wild-type tomato plants causes a minor internode elongation.

whereas in wild-type plants it causes a minor internode elongation
Claim 619functional rolesupports2004Source 8needs review

Cryptochromes function in blue light-dependent random hypocotyl-bending.

Comparison of the responses of the quadruple mutant cry1 cry2 phot1 phot2 to blue light with those of related triple mutants revealed that cryptochromes function in blue light-dependent, random hypocotyl-bending
Claim 620functional rolesupports2004Source 8needs review

Cryptochromes function in blue light-dependent random hypocotyl-bending.

Comparison of the responses of the quadruple mutant cry1 cry2 phot1 phot2 to blue light with those of related triple mutants revealed that cryptochromes function in blue light-dependent, random hypocotyl-bending
Claim 621functional rolesupports2004Source 8needs review

Cryptochromes function in blue light-dependent random hypocotyl-bending.

Comparison of the responses of the quadruple mutant cry1 cry2 phot1 phot2 to blue light with those of related triple mutants revealed that cryptochromes function in blue light-dependent, random hypocotyl-bending
Claim 622functional rolesupports2004Source 8needs review

Cryptochromes function in blue light-dependent random hypocotyl-bending.

Comparison of the responses of the quadruple mutant cry1 cry2 phot1 phot2 to blue light with those of related triple mutants revealed that cryptochromes function in blue light-dependent, random hypocotyl-bending
Claim 623functional rolesupports2004Source 8needs review

Cryptochromes function in blue light-dependent random hypocotyl-bending.

Comparison of the responses of the quadruple mutant cry1 cry2 phot1 phot2 to blue light with those of related triple mutants revealed that cryptochromes function in blue light-dependent, random hypocotyl-bending
Claim 624functional rolesupports2004Source 8needs review

Cryptochromes function in blue light-dependent random hypocotyl-bending.

Comparison of the responses of the quadruple mutant cry1 cry2 phot1 phot2 to blue light with those of related triple mutants revealed that cryptochromes function in blue light-dependent, random hypocotyl-bending
Claim 625functional rolesupports2004Source 8needs review

Cryptochromes function in blue light-dependent random hypocotyl-bending.

Comparison of the responses of the quadruple mutant cry1 cry2 phot1 phot2 to blue light with those of related triple mutants revealed that cryptochromes function in blue light-dependent, random hypocotyl-bending
Claim 626functional rolesupports2004Source 8needs review

Phototropins function in cotyledon expansion as a photomorphogenic response.

phototropins function in one photomorphogenic response, cotyledon expansion
Claim 627gene expression associationsupports2004Source 54needs review

In fruits of CRY2-overexpressing tomato plants, lycopene accumulation is accompanied by decreased expression of lycopene beta-cyclase genes.

The accumulation of lycopene in fruits is accompanied by the decreased expression of lycopene beta-cyclase genes.
Claim 628genetic reversionsupports2004Source 54needs review

Virus-induced gene silencing of CRY2 reverses leaf anthocyanin accumulation, internode shortening, and late flowering in CRY2-overexpressing tomato plants.

Virus-induced gene silencing of CRY2 results in a reversion of leaf anthocyanin accumulation, of internode shortening, and of late flowering in CRY2-overexpressing plants
Claim 629genomic localizationsupports2004Source 11needs review

The CRY2-associated haplogroups are limited to an approximately 65-kb genomic region around CRY2.

Data from six genes flanking CRY2 indicate that these haplogroups are limited to an approximately 65-kb genomic region around CRY2
genomic region size 65 kb
Claim 630genomic localizationsupports2004Source 11needs review

The CRY2-associated haplogroups are limited to an approximately 65-kb genomic region around CRY2.

Data from six genes flanking CRY2 indicate that these haplogroups are limited to an approximately 65-kb genomic region around CRY2
genomic region size 65 kb
Claim 631genomic localizationsupports2004Source 11needs review

The CRY2-associated haplogroups are limited to an approximately 65-kb genomic region around CRY2.

Data from six genes flanking CRY2 indicate that these haplogroups are limited to an approximately 65-kb genomic region around CRY2
genomic region size 65 kb
Claim 632genomic localizationsupports2004Source 11needs review

The CRY2-associated haplogroups are limited to an approximately 65-kb genomic region around CRY2.

Data from six genes flanking CRY2 indicate that these haplogroups are limited to an approximately 65-kb genomic region around CRY2
genomic region size 65 kb
Claim 633genomic localizationsupports2004Source 11needs review

The CRY2-associated haplogroups are limited to an approximately 65-kb genomic region around CRY2.

Data from six genes flanking CRY2 indicate that these haplogroups are limited to an approximately 65-kb genomic region around CRY2
genomic region size 65 kb
Claim 634genomic localizationsupports2004Source 11needs review

The CRY2-associated haplogroups are limited to an approximately 65-kb genomic region around CRY2.

Data from six genes flanking CRY2 indicate that these haplogroups are limited to an approximately 65-kb genomic region around CRY2
genomic region size 65 kb
Claim 635genomic localizationsupports2004Source 11needs review

The CRY2-associated haplogroups are limited to an approximately 65-kb genomic region around CRY2.

Data from six genes flanking CRY2 indicate that these haplogroups are limited to an approximately 65-kb genomic region around CRY2
genomic region size 65 kb
Claim 636method utilitysupports2004Source 11needs review

Linkage disequilibrium mapping is useful for elucidating the genetic basis of natural, ecologically relevant variation in Arabidopsis.

This study demonstrates the utility of LD mapping for elucidating the genetic basis of natural, ecologically relevant variation in Arabidopsis
Claim 637method utilitysupports2004Source 11needs review

Linkage disequilibrium mapping is useful for elucidating the genetic basis of natural, ecologically relevant variation in Arabidopsis.

This study demonstrates the utility of LD mapping for elucidating the genetic basis of natural, ecologically relevant variation in Arabidopsis
Claim 638method utilitysupports2004Source 11needs review

Linkage disequilibrium mapping is useful for elucidating the genetic basis of natural, ecologically relevant variation in Arabidopsis.

This study demonstrates the utility of LD mapping for elucidating the genetic basis of natural, ecologically relevant variation in Arabidopsis
Claim 639method utilitysupports2004Source 11needs review

Linkage disequilibrium mapping is useful for elucidating the genetic basis of natural, ecologically relevant variation in Arabidopsis.

This study demonstrates the utility of LD mapping for elucidating the genetic basis of natural, ecologically relevant variation in Arabidopsis
Claim 640method utilitysupports2004Source 11needs review

Linkage disequilibrium mapping is useful for elucidating the genetic basis of natural, ecologically relevant variation in Arabidopsis.

This study demonstrates the utility of LD mapping for elucidating the genetic basis of natural, ecologically relevant variation in Arabidopsis
Claim 641method utilitysupports2004Source 11needs review

Linkage disequilibrium mapping is useful for elucidating the genetic basis of natural, ecologically relevant variation in Arabidopsis.

This study demonstrates the utility of LD mapping for elucidating the genetic basis of natural, ecologically relevant variation in Arabidopsis
Claim 642method utilitysupports2004Source 11needs review

Linkage disequilibrium mapping is useful for elucidating the genetic basis of natural, ecologically relevant variation in Arabidopsis.

This study demonstrates the utility of LD mapping for elucidating the genetic basis of natural, ecologically relevant variation in Arabidopsis
Claim 643transcriptional regulation rolesupports2004Source 8needs review

cry1 and cry2 independently function as key regulators of early blue light-induced genes.

Microarray analysis suggested that cry1 and cry2 independently function as key regulators of early blue light-induced genes
Claim 644transcriptional regulation rolesupports2004Source 8needs review

cry1 and cry2 independently function as key regulators of early blue light-induced genes.

Microarray analysis suggested that cry1 and cry2 independently function as key regulators of early blue light-induced genes
Claim 645transcriptional regulation rolesupports2004Source 8needs review

cry1 and cry2 independently function as key regulators of early blue light-induced genes.

Microarray analysis suggested that cry1 and cry2 independently function as key regulators of early blue light-induced genes
Claim 646transcriptional regulation rolesupports2004Source 8needs review

cry1 and cry2 independently function as key regulators of early blue light-induced genes.

Microarray analysis suggested that cry1 and cry2 independently function as key regulators of early blue light-induced genes
Claim 647transcriptional regulation rolesupports2004Source 8needs review

cry1 and cry2 independently function as key regulators of early blue light-induced genes.

Microarray analysis suggested that cry1 and cry2 independently function as key regulators of early blue light-induced genes
Claim 648transcriptional regulation rolesupports2004Source 8needs review

cry1 and cry2 independently function as key regulators of early blue light-induced genes.

Microarray analysis suggested that cry1 and cry2 independently function as key regulators of early blue light-induced genes
Claim 649transcriptional regulation rolesupports2004Source 8needs review

cry1 and cry2 independently function as key regulators of early blue light-induced genes.

Microarray analysis suggested that cry1 and cry2 independently function as key regulators of early blue light-induced genes
Claim 650transcriptional regulation rolesupports2004Source 8needs review

phot1 and phot2 play subsidiary roles in transcriptional regulation by blue light.

whereas phot1 and phot2 play subsidiary roles in transcriptional regulation by blue light
Claim 651functional effectsupports2003Source 55needs review

phyA mediates far-red light promotion of flowering with modes of action similar to cry2.

we show that phyA mediates far-red light promotion of flowering with modes of action similar to that of cry2.
Claim 652mechanistic determinantsupports2003Source 55needs review

The short-day-specific diurnal rhythm of cry2 is determined primarily by blue light-dependent cry2 turnover.

The short-day-specific diurnal rhythm of cry2 is determined primarily by blue light-dependent cry2 turnover.
Claim 653model proposalsupports2003Source 55needs review

Individual phytochromes and cryptochromes work together to confer photoperiodic responsiveness in Arabidopsis, and this responsiveness depends on light quality.

Based on these results and a finding that the photoperiodic responsiveness of plants depends on light quality, a model is proposed to explain how individual phytochromes and cryptochromes work together to confer photoperiodic responsiveness in Arabidopsis.
Claim 654protein abundance patternsupports2003Source 55needs review

cry2 and phyA protein abundance show a diurnal rhythm in plants grown in short-day but not in plants grown in long-day.

The protein abundance of cry2 and phyA showed a diurnal rhythm in plants grown in short-day but not in plants grown in long-day.
Claim 655role in biological processsupports2003Source 55needs review

cryptochrome 2 and phytochrome A act as day-length sensors in Arabidopsis.

Here, we report a study of the day-length-dependent response of cryptochrome 2 (cry2) and phytochrome A (phyA) and their role as day-length sensors in Arabidopsis.
Claim 656cellular localizationsupports2002Source 2needs review

gCry2 is expressed in photoreceptors and in visual and circadian system structures in chick brain and retina.

In situ hybridization of chick brain and retina reveals expression in photoreceptors and in visual and circadian system structures.
Claim 657cellular localizationsupports2002Source 2needs review

gCry2 is expressed in photoreceptors and in visual and circadian system structures in chick brain and retina.

In situ hybridization of chick brain and retina reveals expression in photoreceptors and in visual and circadian system structures.
Claim 658cellular localizationsupports2002Source 2needs review

gCry2 is expressed in photoreceptors and in visual and circadian system structures in chick brain and retina.

In situ hybridization of chick brain and retina reveals expression in photoreceptors and in visual and circadian system structures.
Claim 659cellular localizationsupports2002Source 2needs review

gCry2 is expressed in photoreceptors and in visual and circadian system structures in chick brain and retina.

In situ hybridization of chick brain and retina reveals expression in photoreceptors and in visual and circadian system structures.
Claim 660cellular localizationsupports2002Source 2needs review

gCry2 is expressed in photoreceptors and in visual and circadian system structures in chick brain and retina.

In situ hybridization of chick brain and retina reveals expression in photoreceptors and in visual and circadian system structures.
Claim 661cellular localizationsupports2002Source 2needs review

gCry2 is expressed in photoreceptors and in visual and circadian system structures in chick brain and retina.

In situ hybridization of chick brain and retina reveals expression in photoreceptors and in visual and circadian system structures.
Claim 662cellular localizationsupports2002Source 2needs review

gCry2 is expressed in photoreceptors and in visual and circadian system structures in chick brain and retina.

In situ hybridization of chick brain and retina reveals expression in photoreceptors and in visual and circadian system structures.
Claim 663expression distributionsupports2002Source 2needs review

gCry2 mRNA is widely distributed in central nervous and peripheral tissues, with very high expression in pineal and retina.

Northern blot analysis of gCry2 mRNA indicates widespread distribution in central nervous and peripheral tissues, with very high expression in pineal and retina.
Claim 664expression distributionsupports2002Source 2needs review

gCry2 mRNA is widely distributed in central nervous and peripheral tissues, with very high expression in pineal and retina.

Northern blot analysis of gCry2 mRNA indicates widespread distribution in central nervous and peripheral tissues, with very high expression in pineal and retina.
Claim 665expression distributionsupports2002Source 2needs review

gCry2 mRNA is widely distributed in central nervous and peripheral tissues, with very high expression in pineal and retina.

Northern blot analysis of gCry2 mRNA indicates widespread distribution in central nervous and peripheral tissues, with very high expression in pineal and retina.
Claim 666expression distributionsupports2002Source 2needs review

gCry2 mRNA is widely distributed in central nervous and peripheral tissues, with very high expression in pineal and retina.

Northern blot analysis of gCry2 mRNA indicates widespread distribution in central nervous and peripheral tissues, with very high expression in pineal and retina.
Claim 667expression distributionsupports2002Source 2needs review

gCry2 mRNA is widely distributed in central nervous and peripheral tissues, with very high expression in pineal and retina.

Northern blot analysis of gCry2 mRNA indicates widespread distribution in central nervous and peripheral tissues, with very high expression in pineal and retina.
Claim 668expression distributionsupports2002Source 2needs review

gCry2 mRNA is widely distributed in central nervous and peripheral tissues, with very high expression in pineal and retina.

Northern blot analysis of gCry2 mRNA indicates widespread distribution in central nervous and peripheral tissues, with very high expression in pineal and retina.
Claim 669expression distributionsupports2002Source 2needs review

gCry2 mRNA is widely distributed in central nervous and peripheral tissues, with very high expression in pineal and retina.

Northern blot analysis of gCry2 mRNA indicates widespread distribution in central nervous and peripheral tissues, with very high expression in pineal and retina.
Claim 670functional candidate rolesupports2002Source 2needs review

gCry2 is suggested as a candidate avian clock gene and/or photopigment.

The present data suggests that gCry2 is a candidate avian clock gene and/or photopigment
Claim 671functional candidate rolesupports2002Source 2needs review

gCry2 is suggested as a candidate avian clock gene and/or photopigment.

The present data suggests that gCry2 is a candidate avian clock gene and/or photopigment
Claim 672functional candidate rolesupports2002Source 2needs review

gCry2 is suggested as a candidate avian clock gene and/or photopigment.

The present data suggests that gCry2 is a candidate avian clock gene and/or photopigment
Claim 673functional candidate rolesupports2002Source 2needs review

gCry2 is suggested as a candidate avian clock gene and/or photopigment.

The present data suggests that gCry2 is a candidate avian clock gene and/or photopigment
Claim 674functional candidate rolesupports2002Source 2needs review

gCry2 is suggested as a candidate avian clock gene and/or photopigment.

The present data suggests that gCry2 is a candidate avian clock gene and/or photopigment
Claim 675functional candidate rolesupports2002Source 2needs review

gCry2 is suggested as a candidate avian clock gene and/or photopigment.

The present data suggests that gCry2 is a candidate avian clock gene and/or photopigment
Claim 676functional candidate rolesupports2002Source 2needs review

gCry2 is suggested as a candidate avian clock gene and/or photopigment.

The present data suggests that gCry2 is a candidate avian clock gene and/or photopigment
Claim 677ortholog identificationsupports2002Source 2needs review

gCry2 is an identified chicken ortholog of mammalian cryptochrome 2.

We have identified and characterized an ortholog of the putative mammalian clock gene cryptochrome 2 (Cry2) in the chicken, Gallus domesticus.
Claim 678ortholog identificationsupports2002Source 2needs review

gCry2 is an identified chicken ortholog of mammalian cryptochrome 2.

We have identified and characterized an ortholog of the putative mammalian clock gene cryptochrome 2 (Cry2) in the chicken, Gallus domesticus.
Claim 679ortholog identificationsupports2002Source 2needs review

gCry2 is an identified chicken ortholog of mammalian cryptochrome 2.

We have identified and characterized an ortholog of the putative mammalian clock gene cryptochrome 2 (Cry2) in the chicken, Gallus domesticus.
Claim 680ortholog identificationsupports2002Source 2needs review

gCry2 is an identified chicken ortholog of mammalian cryptochrome 2.

We have identified and characterized an ortholog of the putative mammalian clock gene cryptochrome 2 (Cry2) in the chicken, Gallus domesticus.
Claim 681ortholog identificationsupports2002Source 2needs review

gCry2 is an identified chicken ortholog of mammalian cryptochrome 2.

We have identified and characterized an ortholog of the putative mammalian clock gene cryptochrome 2 (Cry2) in the chicken, Gallus domesticus.
Claim 682ortholog identificationsupports2002Source 2needs review

gCry2 is an identified chicken ortholog of mammalian cryptochrome 2.

We have identified and characterized an ortholog of the putative mammalian clock gene cryptochrome 2 (Cry2) in the chicken, Gallus domesticus.
Claim 683ortholog identificationsupports2002Source 2needs review

gCry2 is an identified chicken ortholog of mammalian cryptochrome 2.

We have identified and characterized an ortholog of the putative mammalian clock gene cryptochrome 2 (Cry2) in the chicken, Gallus domesticus.
Claim 684rhythmic expressionsupports2002Source 2needs review

gCry2 expression is rhythmic, with mRNA levels predominating in late subjective night.

Expression is rhythmic; mRNA levels predominate in late subjective night.
Claim 685rhythmic expressionsupports2002Source 2needs review

gCry2 expression is rhythmic, with mRNA levels predominating in late subjective night.

Expression is rhythmic; mRNA levels predominate in late subjective night.
Claim 686rhythmic expressionsupports2002Source 2needs review

gCry2 expression is rhythmic, with mRNA levels predominating in late subjective night.

Expression is rhythmic; mRNA levels predominate in late subjective night.
Claim 687rhythmic expressionsupports2002Source 2needs review

gCry2 expression is rhythmic, with mRNA levels predominating in late subjective night.

Expression is rhythmic; mRNA levels predominate in late subjective night.
Claim 688rhythmic expressionsupports2002Source 2needs review

gCry2 expression is rhythmic, with mRNA levels predominating in late subjective night.

Expression is rhythmic; mRNA levels predominate in late subjective night.
Claim 689rhythmic expressionsupports2002Source 2needs review

gCry2 expression is rhythmic, with mRNA levels predominating in late subjective night.

Expression is rhythmic; mRNA levels predominate in late subjective night.
Claim 690rhythmic expressionsupports2002Source 2needs review

gCry2 expression is rhythmic, with mRNA levels predominating in late subjective night.

Expression is rhythmic; mRNA levels predominate in late subjective night.
Claim 691activity regulationsupports2001Source 56needs review

Photoactivated Arabidopsis cryptochromes repress COP1 activity.

Here we show that both photoactivated cryptochromes repress COP1 activity
Claim 692causal mechanismsupports2001Source 56needs review

Direct regulation of COP1 by photoactivated cryptochromes is primarily responsible for cryptochrome-mediated blue light regulation of seedling photomorphogenic development and genome expression profile.

this direct regulation is primarily responsible for the cryptochrome-mediated blue light regulation of seedling photomorphogenic development and genome expression profile
Claim 693protein interactionsupports2001Source 56needs review

Photoactivated Arabidopsis cryptochromes directly contact COP1.

Here we show that both photoactivated cryptochromes repress COP1 activity through a direct protein-protein contact
Claim 694functional role summarysupports2000Source 14needs review

Phototropic bending of the shoot toward unilateral blue light is mediated by phototropin, and cry1, cry2, phyA, and phyB positively regulate the response.

Claim 695interaction summarysupports2000Source 14needs review

cry2 and phyB are antagonistic in the induction of flowering.

Claim 696interaction summarysupports2000Source 14needs review

In higher plants, natural radiation can simultaneously activate more than one photoreceptor, and certain photoreceptor genes show light-dependent epistasis.

Claim 697interaction summarysupports2000Source 14needs review

Under short photoperiods of red and blue light, cry1 and phyB are synergistic, whereas under continuous exposure to the same light field their actions become independent and additive.

Claim 698mechanistic hypothesis summarysupports2000Source 14needs review

At least some photoreceptor interactions are likely to result from cross talk of photoreceptor signaling pathways.

Claim 699systems level summarysupports2000Source 14needs review

Experiments under natural radiation suggest that photoreceptor interactions create a phototransduction network with emergent properties that provides a more robust system for light perception in plants.

Claim 700domain functionsupports1999Source 57needs review

The C-terminal domain of CRY2 containing a basic bipartite nuclear localization signal is sufficient to confer nuclear localization of the fusion protein.

The C-terminal domain of cry2 that contains the basic bipartite nuclear localization signal was sufficient to confer nuclear localization of the fusion protein.
Claim 701subcellular localizationsupports1999Source 57needs review

CRY2 is a nuclear protein.

These results strongly suggest that cry2 is a nuclear protein.
Claim 702allelic relationshipsupports1998Source 58needs review

A mutation in Arabidopsis thaliana CRY2 is allelic to the late-flowering mutant fha.

A mutation in the Arabidopsis thaliana CRY2 gene encoding a blue-light receptor apoprotein (CRY2) is allelic to the late-flowering mutant, fha.
Claim 703antagonistic regulationsupports1998Source 58needs review

Flowering is regulated by antagonistic actions of phyB and cry2.

Analysis of flowering in cry2 and phyB mutants in response to different wavelengths of light indicated that flowering is regulated by the antagonistic actions of phyB and cry2.
Claim 704biological regulationsupports1998Source 58needs review

The shift from vegetative growth to floral development is regulated by phytochromes and cryptochromes.

The shift in plants from vegetative growth to floral development is regulated by red-far-red light receptors (phytochromes) and blue-ultraviolet A light receptors (cryptochromes).
Claim 705comparative functionsupports1998Source 59needs review

In contrast to CRY1, CRY2 functions primarily under low light during early seedling development.

In contrast to CRY1 ... cryptochrome 2 functions primarily under low light during the early development of seedlings.
Claim 706differential stabilitysupports1998Source 3needs review

CRY2 is rapidly degraded under activating light fluences whereas CRY1 is not.

cry2 is rapidly degraded under light fluences (green, blue, and UV) that activate the photoreceptor, but cry1 is not
Claim 707differential stabilitysupports1998Source 3needs review

CRY2 is rapidly degraded under activating light fluences whereas CRY1 is not.

cry2 is rapidly degraded under light fluences (green, blue, and UV) that activate the photoreceptor, but cry1 is not
Claim 708differential stabilitysupports1998Source 3needs review

CRY2 is rapidly degraded under activating light fluences whereas CRY1 is not.

cry2 is rapidly degraded under light fluences (green, blue, and UV) that activate the photoreceptor, but cry1 is not
Claim 709differential stabilitysupports1998Source 3needs review

CRY2 is rapidly degraded under activating light fluences whereas CRY1 is not.

cry2 is rapidly degraded under light fluences (green, blue, and UV) that activate the photoreceptor, but cry1 is not
Claim 710differential stabilitysupports1998Source 3needs review

CRY2 is rapidly degraded under activating light fluences whereas CRY1 is not.

cry2 is rapidly degraded under light fluences (green, blue, and UV) that activate the photoreceptor, but cry1 is not
Claim 711differential stabilitysupports1998Source 3needs review

CRY2 is rapidly degraded under activating light fluences whereas CRY1 is not.

cry2 is rapidly degraded under light fluences (green, blue, and UV) that activate the photoreceptor, but cry1 is not
Claim 712differential stabilitysupports1998Source 3needs review

CRY2 is rapidly degraded under activating light fluences whereas CRY1 is not.

cry2 is rapidly degraded under light fluences (green, blue, and UV) that activate the photoreceptor, but cry1 is not
Claim 713domain interchangeabilitysupports1998Source 3needs review

Domains of CRY1 and CRY2 are functionally interchangeable in fusion constructs overexpressed in transgenic plants.

we demonstrate by overexpression in transgenic plants of cry1 and cry2 fusion constructs that their domains are functionally interchangeable
Claim 714domain interchangeabilitysupports1998Source 3needs review

Domains of CRY1 and CRY2 are functionally interchangeable in fusion constructs overexpressed in transgenic plants.

we demonstrate by overexpression in transgenic plants of cry1 and cry2 fusion constructs that their domains are functionally interchangeable
Claim 715domain interchangeabilitysupports1998Source 3needs review

Domains of CRY1 and CRY2 are functionally interchangeable in fusion constructs overexpressed in transgenic plants.

we demonstrate by overexpression in transgenic plants of cry1 and cry2 fusion constructs that their domains are functionally interchangeable
Claim 716domain interchangeabilitysupports1998Source 3needs review

Domains of CRY1 and CRY2 are functionally interchangeable in fusion constructs overexpressed in transgenic plants.

we demonstrate by overexpression in transgenic plants of cry1 and cry2 fusion constructs that their domains are functionally interchangeable
Claim 717domain interchangeabilitysupports1998Source 3needs review

Domains of CRY1 and CRY2 are functionally interchangeable in fusion constructs overexpressed in transgenic plants.

we demonstrate by overexpression in transgenic plants of cry1 and cry2 fusion constructs that their domains are functionally interchangeable
Claim 718domain interchangeabilitysupports1998Source 3needs review

Domains of CRY1 and CRY2 are functionally interchangeable in fusion constructs overexpressed in transgenic plants.

we demonstrate by overexpression in transgenic plants of cry1 and cry2 fusion constructs that their domains are functionally interchangeable
Claim 719domain interchangeabilitysupports1998Source 3needs review

Domains of CRY1 and CRY2 are functionally interchangeable in fusion constructs overexpressed in transgenic plants.

we demonstrate by overexpression in transgenic plants of cry1 and cry2 fusion constructs that their domains are functionally interchangeable
Claim 720expression localizationsupports1998Source 60needs review

CRY1 and CRY2 are specifically expressed in the ganglion cell and inner nuclear layers of the mouse retina.

We have found that the two blue-light photoreceptors, cryptochromes 1 and 2 (CRY1 and CRY2), recently discovered in mammals are specifically expressed in the ganglion cell and inner nuclear layers of the mouse retina.
Claim 721functional overlapsupports1998Source 3needs review

CRY1 and CRY2 overlap in function in Arabidopsis.

The two members of the Arabidopsis cryptochrome gene family (CRY1 and CRY2) overlap in function
Claim 722functional overlapsupports1998Source 3needs review

CRY1 and CRY2 overlap in function in Arabidopsis.

The two members of the Arabidopsis cryptochrome gene family (CRY1 and CRY2) overlap in function
Claim 723functional overlapsupports1998Source 3needs review

CRY1 and CRY2 overlap in function in Arabidopsis.

The two members of the Arabidopsis cryptochrome gene family (CRY1 and CRY2) overlap in function
Claim 724functional overlapsupports1998Source 3needs review

CRY1 and CRY2 overlap in function in Arabidopsis.

The two members of the Arabidopsis cryptochrome gene family (CRY1 and CRY2) overlap in function
Claim 725functional overlapsupports1998Source 3needs review

CRY1 and CRY2 overlap in function in Arabidopsis.

The two members of the Arabidopsis cryptochrome gene family (CRY1 and CRY2) overlap in function
Claim 726functional overlapsupports1998Source 3needs review

CRY1 and CRY2 overlap in function in Arabidopsis.

The two members of the Arabidopsis cryptochrome gene family (CRY1 and CRY2) overlap in function
Claim 727functional overlapsupports1998Source 3needs review

CRY1 and CRY2 overlap in function in Arabidopsis.

The two members of the Arabidopsis cryptochrome gene family (CRY1 and CRY2) overlap in function
Claim 728functional rolesupports1998Source 59needs review

Cryptochrome 2 mediates blue light-dependent inhibition of hypocotyl elongation in Arabidopsis seedlings under low blue light intensities.

It is found that cryptochrome 2 mediates blue light-dependent inhibition of hypocotyl elongation ... under low intensities of blue light.
Claim 729functional rolesupports1998Source 59needs review

Cryptochrome 2 mediates blue light-dependent stimulation of cotyledon opening in Arabidopsis seedlings under low blue light intensities.

It is found that cryptochrome 2 mediates ... stimulation of cotyledon opening under low intensities of blue light.
Claim 730low light significancesupports1998Source 3needs review

Because CRY2 accumulates to high levels under low-light intensities, it may have greater significance in wild-type plants when light is limited.

Because cry2 accumulates to high levels under low-light intensities, it may have greater significance in wild-type plants under conditions when light is limited
Claim 731low light significancesupports1998Source 3needs review

Because CRY2 accumulates to high levels under low-light intensities, it may have greater significance in wild-type plants when light is limited.

Because cry2 accumulates to high levels under low-light intensities, it may have greater significance in wild-type plants under conditions when light is limited
Claim 732low light significancesupports1998Source 3needs review

Because CRY2 accumulates to high levels under low-light intensities, it may have greater significance in wild-type plants when light is limited.

Because cry2 accumulates to high levels under low-light intensities, it may have greater significance in wild-type plants under conditions when light is limited
Claim 733low light significancesupports1998Source 3needs review

Because CRY2 accumulates to high levels under low-light intensities, it may have greater significance in wild-type plants when light is limited.

Because cry2 accumulates to high levels under low-light intensities, it may have greater significance in wild-type plants under conditions when light is limited
Claim 734low light significancesupports1998Source 3needs review

Because CRY2 accumulates to high levels under low-light intensities, it may have greater significance in wild-type plants when light is limited.

Because cry2 accumulates to high levels under low-light intensities, it may have greater significance in wild-type plants under conditions when light is limited
Claim 735low light significancesupports1998Source 3needs review

Because CRY2 accumulates to high levels under low-light intensities, it may have greater significance in wild-type plants when light is limited.

Because cry2 accumulates to high levels under low-light intensities, it may have greater significance in wild-type plants under conditions when light is limited
Claim 736low light significancesupports1998Source 3needs review

Because CRY2 accumulates to high levels under low-light intensities, it may have greater significance in wild-type plants when light is limited.

Because cry2 accumulates to high levels under low-light intensities, it may have greater significance in wild-type plants under conditions when light is limited
Claim 737phenotype responsesupports1998Source 58needs review

Flowering in cry2/fha mutant plants is only incompletely responsive to photoperiod.

Flowering in cry2/fha mutant plants is only incompletely responsive to photoperiod.
Claim 738positive regulationsupports1998Source 58needs review

Cryptochrome 2 is a positive regulator of the flowering-time gene CO.

Cryptochrome 2 (cry2) is a positive regulator of the flowering-time gene CO, the expression of which is regulated by photoperiod.
Claim 739regulationsupports1998Source 59needs review

CRY2 expression is rapidly down-regulated by blue light in a light-intensity dependent manner.

the expression of CRY2 is rapidly down-regulated by blue light in a light-intensity dependent manner

Approval Evidence

26 sources82 linked approval claimsfirst-pass slugs arabidopsis-cryptochrome2, cry2, cry2-based-optical-trkb-activation-approach, cry2-cibn-optogenetic-modules, cryptochrome2, cryptochrome-2-cry2, gcry2
Key to these advances are photoreceptors such as cryptochrome 2 (CRY2)... which undergo conformational changes upon illumination to trigger conditional protein-protein interactions, localization shifts, or phase transitions.

Source:

Explicitly supported tool/component names recovered from sources include optoDroplets, Corelets, OptoGranules, Cry2, iLID, SspB, ferritin/FTH1, G3BP1, and MBP-based OptoMBP.

Source:

BcLOVclust-clustered over many cycles with substantially faster clustering and de-clustering kinetics compared to the widely used optogenetic clustering protein Cry2.

Source:

revealed a new degradation pathway for CRY2

Source:

to the photodimeric proteins CRY2 and CIB1

Source:

there is currently only one protein —Cry2—whose light-induced clustering has been harnessed for these purposes

Source:

the photosensitive cryptochrome-2 (CRY2)

Source:

light-evoked homo-oligomerization of cryptochrome CRY2

Source:

phosphorylated forms of CRY2 induced by blue light are stabilized by cold stress

Source:

BEE1 promotes flowering in a blue light photoreceptor CRYPTOCHROME 2 (CRY2) partially dependent manner

Source:

Utilizing the photosensitive protein Arabidopsis thaliana cryptochrome 2 (CRY2), the light-inducible homo-interaction of the intracellular domain of TrkB (iTrkB) in the cytosol or on the plasma membrane is able to induce the activation of downstream MAPK/ERK and PI3K/Akt signaling as well as the neurite outgrowth of PC12 cells.

Source:

cryptochrome 2 (CRY2) from Arabidopsis thaliana has been recently utilized for blue light-dependent spatiotemporal control of protein homo-oligomerization

Source:

mechanismsupports

CRY2, LOV domains, and phytochromes undergo conformational changes upon illumination that can trigger conditional protein-protein interactions, localization shifts, or phase transitions.

Source:

comparative performancesupports

BcLOVclust shows substantially faster clustering and de-clustering kinetics than Cry2.

This variant-called BcLOVclust-clustered over many cycles with substantially faster clustering and de-clustering kinetics compared to the widely used optogenetic clustering protein Cry2.

Source:

multiplexing capabilitysupports

At low temperatures, BcLOVclust and Cry2 can be multiplexed in the same cells to control independent protein condensates with light.

At low temperatures, BcLOVclust and Cry2 could be multiplexed in the same cells, allowing light control of independent protein condensates.

Source:

comparative performancesupports

BcLOVclust has dramatically faster clustering and de-clustering kinetics than Cry2.

BcLOVclust, clustered over many cycles with dramatically faster clustering and de-clustering kinetics compared to Cry2

Source:

construct architecturesupports

LAB fuses the two halves of split-TurboID to the photodimeric proteins CRY2 and CIB1.

Our technology, called light-activated BioID (LAB), fuses the two halves of the split-TurboID proximity labeling enzyme to the photodimeric proteins CRY2 and CIB1.

Source:

degradation pathwaysupports

Wild-type CRY2 and the CRY2 variant are degraded by a lysosomal-mediated degradation pathway.

Further studies revealed that wild-type and CRY2 variants are degraded by the lysosomal-mediated degradation pathway, a mechanism not previously associated with CRY2.

Source:

mechanismsupports

Ser-420 of CRY2 is required for interaction with the E3 ligases FBXL3 and FBXL21.

which suggests Ser-420 of CRY2 is required for the interaction with E3 ligases

Source:

mechanism of actionsupports

Upon blue light illumination, CRY2 and CIB1 dimerize, reconstitute split-TurboID, and initiate biotinylation.

upon illumination with blue light, CRY2 and CIB1 dimerize, reconstitute split-TurboID and initiate biotinylation

Source:

multiplexing capabilitysupports

At low temperatures, BcLOVclust and Cry2 can be multiplexed in the same cells to independently control protein condensates.

At low temperatures, BcLOVclust and Cry2 could be multiplexed in the same cells, allowing light control of independent protein condensates.

Source:

reversibilitysupports

Turning off the light causes CRY2 and CIB1 to dissociate and halts biotinylation.

Turning off the light leads to the dissociation of CRY2 and CIB1 and halts biotinylation.

Source:

mechanismsupports

optoSynC uses light-evoked homo-oligomerization of CRY2 to silence synaptic transmission by clustering synaptic vesicles.

Here, we use light-evoked homo-oligomerization of cryptochrome CRY2 to silence synaptic transmission, by clustering synaptic vesicles (SVs).

Source:

mechanism of actionsupports

Tagging CRY2 with the catalytic domain of PKC isozymes efficiently promotes translocation to the cell surface upon blue light exposure.

We show that tagging CRY2 with the catalytic domain of PKC isozymes can efficiently promote its translocation to the cell surface upon blue light exposure.

Source:

tool developmentsupports

The authors developed an optogenetic blue light-activated PKC isozyme system based on CRY2-CIB1 dimerization.

Here, we developed an optogenetic blue light-activated PKC isozyme that harnesses a plant-based dimerization system between the photosensitive cryptochrome-2 (CRY2) and the N terminus of the transcription factor calcium and integrin-binding protein 1 (CIB1)

Source:

functional effectsupports

CRY2-mediated blue-light signaling enhances freezing tolerance.

CRY2-mediated blue-light signaling enhances freezing tolerance

Source:

molecular mechanismsupports

Cold-stabilized CRY2 competes with HY5 and attenuates the HY5-COP1 interaction, allowing HY5 to accumulate at cold temperatures.

cold-stabilized CRY2 competes with the transcription factor HY5 to attenuate the HY5-COP1 interaction, thereby allowing HY5 to accumulate at cold temperatures

Source:

stability changesupports

Blue light-induced phosphorylated forms of CRY2 are stabilized by cold stress.

phosphorylated forms of CRY2 induced by blue light are stabilized by cold stress

Source:

comparative performancesupports

Among the compared strategies, the CRY2-integrated approach that combines light-induced membrane recruitment and iTrkB homo-interaction was the most efficient at activating TrkB receptors.

By comparing all the different strategies, we find that the CRY2-integrated approach to achieve light-induced cell membrane recruitment and homo-interaction of iTrkB is most efficient in activating TrkB receptors.

Source:

dependency relationshipsupports

BEE1 promotes flowering in a CRY2 partially dependent manner.

BEE1 promotes flowering in a blue light photoreceptor CRYPTOCHROME 2 (CRY2) partially dependent manner

Source:

generalizabilitysupports

The optical TrkB activation strategy is generalizable to other optical homo-dimerizers, including an aureochrome 1 LOV-domain-based implementation.

we prove that such strategies are generalizable to other optical homo-dimerizers by demonstrating the optical TrkB activation based on the light-oxygen-voltage domain of aureochrome 1 from Vaucheria frigida

Source:

pathway modelsupports

BEE1 integrates BES1 and CRY2 in mediating flowering, and BES1-BEE1-FT is a signaling pathway regulating photoperiodic flowering.

Our findings indicate that BEE1 is the integrator of BES1 and CRY2 mediating flowering, and BES1-BEE1-FT is a new signaling pathway in regulating photoperiodic flowering.

Source:

Comparisons

Source-backed strengths

The evidence supports that CRY2 is a bona fide blue-light-responsive photoreceptor with mechanistic links to transcription factor regulation and regulated turnover. Multiple cited studies address CRY2 signaling and degradation, indicating that its light responsiveness and proteolytic regulation have been examined in more than one context.

Source:

This variant-called BcLOVclust-clustered over many cycles with substantially faster clustering and de-clustering kinetics compared to the widely used optogenetic clustering protein Cry2.

Source:

BcLOVclust, clustered over many cycles with dramatically faster clustering and de-clustering kinetics compared to Cry2

Source:

allowing us to engineer a variant of BcLOV4 that clusters in the cytoplasm and does not associate with the membrane in response to blue light

Source:

Further, optoSynC can inhibit exocytosis for several hours, at very low light intensities.

Ranked Citations

  1. 1.
    StructuralSource 1Journal of Biological Chemistry2022Claim 149Claim 150Claim 151

    Extracted from this source document.

  2. 2.
    StructuralSource 2FEBS Letters2002Claim 656Claim 657Claim 658

    Extracted from this source document.

  3. 3.
    StructuralSource 3The Plant Cell1998Claim 706Claim 707Claim 708

    Extracted from this source document.

  4. 4.
    StructuralSource 4Journal of Biological Rhythms2009Claim 522Claim 523Claim 524

    Extracted from this source document.

  5. 5.
    StructuralSource 5ACS Synthetic Biology2024

    Extracted from this source document.

  6. 6.
    StructuralSource 6The Plant Cell2012Claim 476Claim 477Claim 478

    Extracted from this source document.

  7. 7.
    StructuralSource 7Proceedings of the National Academy of Sciences2007Claim 551Claim 552Claim 553

    Seeded from load plan for claim c5.

  8. 8.
    StructuralSource 8Proceedings of the National Academy of Sciences2004Claim 619Claim 620Claim 621

    Extracted from this source document.

  9. 9.
    FoundationalSource 9Journal of Biological Chemistry2023Claim 92Claim 107

    Seeded from load plan for claim c5.

  10. 10.
    StructuralSource 10Journal of Cell Science2023Claim 71Claim 72Claim 73

    Extracted from this source document.

  11. 11.

    Extracted from this source document.

  12. 12.

    Extracted from this source document.

  13. 13.
    StructuralSource 13Journal of Cell Science2016Claim 371Claim 372Claim 373

    Extracted from this source document.

  14. 14.
    Best ReviewSource 14Photochemistry and Photobiology2000Claim 694Claim 695Claim 696

    Seeded from load plan for claim cl1.

  15. 15.

    Extracted from this source document. Seeded from load plan for claim claim_2.

  16. 16.
    StructuralSource 16Nature Communications2022Claim 163Claim 164Claim 165

    Extracted from this source document.

  17. 17.

    Extracted from this source document.

  18. 18.
    StructuralSource 18Frontiers in Plant Science2022Claim 185Claim 186Claim 209

    Extracted from this source document. Seeded from load plan for claim cl1.

  19. 19.
    StructuralSource 19Communications Biology2021Claim 267Claim 268Claim 290

    Seeded from load plan for claim c1.

  20. 20.
    StructuralSource 20Plant and Cell Physiology2016Claim 380Claim 381Claim 382

    Extracted from this source document.

  21. 21.
    StructuralSource 21The Plant Cell2021Claim 260Claim 261Claim 262

    Extracted from this source document.