Toolkit/CRY2/CIB1

CRY2/CIB1

Multi-Component Switch·cryptochrome·Research·Since 2014Seed — needs curation

Also known as: CRY2/CIB, CRY2-CIB1, CRY2/CIB1, CRY2-CIB dimerizer, CRY2-CIB dimerizers, cryptochrome2 (CRY2)/CIB1, cryptochrome 2 system

Taxonomy: Mechanism Branch / Architecture. Workflows sit above the mechanism and technique branches rather than replacing them.

Summary

CRY2/CIB1 is a blue-light-inducible multi-component interaction switch composed of the photoreceptor CRY2 and its interacting partner CIB1. It is used for acute light-dependent protein recruitment, including plasma-membrane recruitment and clustering, to control protein localization and downstream signaling with high spatial and temporal resolution.

Usefulness & Problems

Why this is useful

This system enables optical control of protein localization and activity with high spatial and temporal resolution in cellular optogenetics. In the cited fission yeast studies, it supported acute recruitment of Cdc42 variants to the plasma membrane and thereby enabled perturbation of polarity signaling.

Source:

Here, we use the CRY2-CIB1 optogenetic system to recruit and cluster a cytosolic Cdc42 allele at the plasma membrane and show that this leads to its moderate activation also on cell sides.

Source:

Here, we use the CRY2-CIB1 optogenetic system to recruit and cluster a cytosolic Cdc42 variant at the plasma membrane and show that this leads to its moderate activation also on cell sides.

Source:

Light-inducible dimers are powerful tools for cellular optogenetics, as they can be used to control the localization and activity of proteins with high spatial and temporal resolution.

Source:

The improvements regarding the FKF1/GI- and CRY2/CIB1-based systems will be widely applicable for the light-dependent control of transcription in mammalian cells.

Problem solved

CRY2/CIB1 addresses the need for reversible, light-gated control of intracellular protein positioning and signaling without constitutive tethering. The supplied evidence specifically supports its use for plasma-membrane recruitment and clustering of cytosolic proteins to probe Cdc42-dependent polarization mechanisms.

Source:

The improvements regarding the FKF1/GI- and CRY2/CIB1-based systems will be widely applicable for the light-dependent control of transcription in mammalian cells.

Source:

we demonstrate successful application of the CRY2/CIB dimerizers using a membrane-tethered CRY2, which may allow for better local control of protein interactions

Problem links

Need conditional control of signaling activity

Derived

CRY2/CIB1 is a blue-light-inducible multi-component interaction switch built from the photoreceptor CRY2 and its interacting partner CIB1. It is used to drive acute light-dependent protein recruitment, including plasma-membrane recruitment and clustering, to control localization and downstream signaling with high spatial and temporal resolution.

Need conditional recombination or state switching

Derived

CRY2/CIB1 is a blue-light-inducible multi-component interaction switch built from the photoreceptor CRY2 and its interacting partner CIB1. It is used to drive acute light-dependent protein recruitment, including plasma-membrane recruitment and clustering, to control localization and downstream signaling with high spatial and temporal resolution.

Need inducible protein relocalization or recruitment

Derived

CRY2/CIB1 is a blue-light-inducible multi-component interaction switch built from the photoreceptor CRY2 and its interacting partner CIB1. It is used to drive acute light-dependent protein recruitment, including plasma-membrane recruitment and clustering, to control localization and downstream signaling with high spatial and temporal resolution.

Need precise spatiotemporal control with light input

Derived

CRY2/CIB1 is a blue-light-inducible multi-component interaction switch built from the photoreceptor CRY2 and its interacting partner CIB1. It is used to drive acute light-dependent protein recruitment, including plasma-membrane recruitment and clustering, to control localization and downstream signaling with high spatial and temporal resolution.

Need tighter control over gene expression timing or amplitude

Derived

CRY2/CIB1 is a blue-light-inducible multi-component interaction switch built from the photoreceptor CRY2 and its interacting partner CIB1. It is used to drive acute light-dependent protein recruitment, including plasma-membrane recruitment and clustering, to control localization and downstream signaling with high spatial and temporal resolution.

Workflow Fit

Likely fit

  • fast-no-cloning-screen: useful for quick interaction-switch feasibility checks
  • standard-construct-loop: useful when localization, stoichiometry, or effector fusion details need iteration

Taxonomy & Function

Primary hierarchy

Mechanism Branch

Architecture: A composed arrangement of multiple parts that instantiates one or more mechanisms.

Target processes

localizationrecombinationsignalingtranscription

Input: Light

Output: Signaling

Implementation Constraints

cofactor dependency: cofactor requirement unknownencoding mode: genetically encodedimplementation constraint: context specific validationimplementation constraint: multi component delivery burdenimplementation constraint: spectral hardware requirementmechanism class: light-dependent bindingoperating role: actuatoroperating role: regulatorphotoreceptor family: cryptochromeswitch architecture: multi componentswitch architecture: recruitmentswitch architecture: split

The system consists of the photoreceptor CRY2 and its interacting partner CIB1 and is activated by blue light. Reported implementations used it to recruit and cluster cytosolic Cdc42 variants or alleles at the plasma membrane in Schizosaccharomyces pombe, implying a two-component construct design with one partner positioned for cortical recruitment.

The provided evidence indicates that CRY2/CIB1 properties vary dramatically in dark-state and lit-state binding affinity relative to other dimerizers, but it does not provide quantitative values here. Validation in the supplied claims is concentrated on localization and signaling assays in fission yeast, so broader organismal performance, kinetics, and photophysical constraints are not established from this evidence set alone.

Validation

Cell-freeBacteriaMammalianMouseHumanTherapeuticIndep. Replication

Observations

successYeastmechanistic demoSchizosaccharomyces pombe

Inferred from claim c2 during normalization. Optogenetic recruitment of constitutively active Cdc42 leads to co-recruitment of Scd1 and endogenous Cdc42 in a Scd2-dependent manner. Derived from claim c2. Quoted text: optogenetic recruitment of constitutively active Cdc42 leads to co-recruitment of the guanine nucleotide exchange factor (GEF) Scd1 and endogenous Cdc42, in a manner dependent on the scaffold protein Scd2

Source:

successYeastapplication demoSchizosaccharomyces pombe

Inferred from claim c1 during normalization. The CRY2-CIB1 optogenetic system was used to recruit and cluster a cytosolic Cdc42 allele at the plasma membrane, leading to moderate activation on cell sides. Derived from claim c1. Quoted text: Here, we use the CRY2-CIB1 optogenetic system to recruit and cluster a cytosolic Cdc42 allele at the plasma membrane and show that this leads to its moderate activation also on cell sides.

Source:

Supporting Sources

Ranked Claims

Claim 1conclusionsupports2020Source 7needs review

Scaffold-mediated positive feedback gated by Ras activity confers robust polarization for rod-shape formation.

We conclude that scaffold-mediated positive feedback, gated by Ras activity, confers robust polarization for rod-shape formation.
Claim 2implementationsupports2020Source 7needs review

The study implemented the CRY2-CIB1 optogenetic system for acute light-dependent protein recruitment to the plasma membrane in Schizosaccharomyces pombe.

We implemented the CRY2-CIB1 optogenetic system for acute light-dependent protein recruitment to the plasma membrane
Claim 3mechanismsupports2020Source 7needs review

Optogenetic recruitment of constitutively active Cdc42 leads to co-recruitment of Scd1 and endogenous Cdc42 in a Scd2-dependent manner.

optogenetic recruitment of constitutively active Cdc42 leads to co-recruitment of the guanine nucleotide exchange factor (GEF) Scd1 and endogenous Cdc42, in a manner dependent on the scaffold protein Scd2
Claim 4tool effectsupports2020Source 8needs review

The CRY2-CIB1 optogenetic system was used to recruit and cluster a cytosolic Cdc42 allele at the plasma membrane, leading to moderate activation on cell sides.

Here, we use the CRY2-CIB1 optogenetic system to recruit and cluster a cytosolic Cdc42 allele at the plasma membrane and show that this leads to its moderate activation also on cell sides.
Claim 5tool effectsupports2020Source 9needs review

Using the CRY2-CIB1 optogenetic system to recruit and cluster a cytosolic Cdc42 variant at the plasma membrane leads to moderate Cdc42 activation on cell sides.

Here, we use the CRY2-CIB1 optogenetic system to recruit and cluster a cytosolic Cdc42 variant at the plasma membrane and show that this leads to its moderate activation also on cell sides.
Section: abstract
Claim 6capabilitysupports2019Source 2needs review

Light-inducible dimers can be used to control protein localization and activity with high spatial and temporal resolution for cellular optogenetics.

Light-inducible dimers are powerful tools for cellular optogenetics, as they can be used to control the localization and activity of proteins with high spatial and temporal resolution.
Claim 7capabilitysupports2019Source 2needs review

Light-inducible dimers can be used to control protein localization and activity with high spatial and temporal resolution for cellular optogenetics.

Light-inducible dimers are powerful tools for cellular optogenetics, as they can be used to control the localization and activity of proteins with high spatial and temporal resolution.
Claim 8capabilitysupports2019Source 2needs review

Light-inducible dimers can be used to control protein localization and activity with high spatial and temporal resolution for cellular optogenetics.

Light-inducible dimers are powerful tools for cellular optogenetics, as they can be used to control the localization and activity of proteins with high spatial and temporal resolution.
Claim 9capabilitysupports2019Source 2needs review

Light-inducible dimers can be used to control protein localization and activity with high spatial and temporal resolution for cellular optogenetics.

Light-inducible dimers are powerful tools for cellular optogenetics, as they can be used to control the localization and activity of proteins with high spatial and temporal resolution.
Claim 10capabilitysupports2019Source 2needs review

Light-inducible dimers can be used to control protein localization and activity with high spatial and temporal resolution for cellular optogenetics.

Light-inducible dimers are powerful tools for cellular optogenetics, as they can be used to control the localization and activity of proteins with high spatial and temporal resolution.
Claim 11capabilitysupports2019Source 2needs review

Light-inducible dimers can be used to control protein localization and activity with high spatial and temporal resolution for cellular optogenetics.

Light-inducible dimers are powerful tools for cellular optogenetics, as they can be used to control the localization and activity of proteins with high spatial and temporal resolution.
Claim 12capabilitysupports2019Source 2needs review

Light-inducible dimers can be used to control protein localization and activity with high spatial and temporal resolution for cellular optogenetics.

Light-inducible dimers are powerful tools for cellular optogenetics, as they can be used to control the localization and activity of proteins with high spatial and temporal resolution.
Claim 13capabilitysupports2019Source 2needs review

Light-inducible dimers can be used to control protein localization and activity with high spatial and temporal resolution for cellular optogenetics.

Light-inducible dimers are powerful tools for cellular optogenetics, as they can be used to control the localization and activity of proteins with high spatial and temporal resolution.
Claim 14capabilitysupports2019Source 2needs review

Light-inducible dimers can be used to control protein localization and activity with high spatial and temporal resolution for cellular optogenetics.

Light-inducible dimers are powerful tools for cellular optogenetics, as they can be used to control the localization and activity of proteins with high spatial and temporal resolution.
Claim 15capabilitysupports2019Source 2needs review

Light-inducible dimers can be used to control protein localization and activity with high spatial and temporal resolution for cellular optogenetics.

Light-inducible dimers are powerful tools for cellular optogenetics, as they can be used to control the localization and activity of proteins with high spatial and temporal resolution.
Claim 16capabilitysupports2019Source 2needs review

Light-inducible dimers can be used to control protein localization and activity with high spatial and temporal resolution for cellular optogenetics.

Light-inducible dimers are powerful tools for cellular optogenetics, as they can be used to control the localization and activity of proteins with high spatial and temporal resolution.
Claim 17capabilitysupports2019Source 2needs review

Light-inducible dimers can be used to control protein localization and activity with high spatial and temporal resolution for cellular optogenetics.

Light-inducible dimers are powerful tools for cellular optogenetics, as they can be used to control the localization and activity of proteins with high spatial and temporal resolution.
Claim 18capabilitysupports2019Source 2needs review

Light-inducible dimers can be used to control protein localization and activity with high spatial and temporal resolution for cellular optogenetics.

Light-inducible dimers are powerful tools for cellular optogenetics, as they can be used to control the localization and activity of proteins with high spatial and temporal resolution.
Claim 19capabilitysupports2019Source 2needs review

Light-inducible dimers can be used to control protein localization and activity with high spatial and temporal resolution for cellular optogenetics.

Light-inducible dimers are powerful tools for cellular optogenetics, as they can be used to control the localization and activity of proteins with high spatial and temporal resolution.
Claim 20capabilitysupports2019Source 2needs review

Light-inducible dimers can be used to control protein localization and activity with high spatial and temporal resolution for cellular optogenetics.

Light-inducible dimers are powerful tools for cellular optogenetics, as they can be used to control the localization and activity of proteins with high spatial and temporal resolution.
Claim 21capabilitysupports2019Source 2needs review

Light-inducible dimers can be used to control protein localization and activity with high spatial and temporal resolution for cellular optogenetics.

Light-inducible dimers are powerful tools for cellular optogenetics, as they can be used to control the localization and activity of proteins with high spatial and temporal resolution.
Claim 22capabilitysupports2019Source 2needs review

Light-inducible dimers can be used to control protein localization and activity with high spatial and temporal resolution for cellular optogenetics.

Light-inducible dimers are powerful tools for cellular optogenetics, as they can be used to control the localization and activity of proteins with high spatial and temporal resolution.
Claim 23comparative propertysupports2019Source 2needs review

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities
Claim 24comparative propertysupports2019Source 2needs review

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities
Claim 25comparative propertysupports2019Source 2needs review

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities
Claim 26comparative propertysupports2019Source 2needs review

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities
Claim 27comparative propertysupports2019Source 2needs review

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities
Claim 28comparative propertysupports2019Source 2needs review

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities
Claim 29comparative propertysupports2019Source 2needs review

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities
Claim 30comparative propertysupports2019Source 2needs review

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities
Claim 31comparative propertysupports2019Source 2needs review

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities
Claim 32comparative propertysupports2019Source 2needs review

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities
Claim 33comparative propertysupports2019Source 2needs review

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities
Claim 34comparative propertysupports2019Source 2needs review

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities
Claim 35comparative propertysupports2019Source 2needs review

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities
Claim 36comparative propertysupports2019Source 2needs review

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities
Claim 37comparative propertysupports2019Source 2needs review

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities
Claim 38comparative propertysupports2019Source 2needs review

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities
Claim 39comparative propertysupports2019Source 2needs review

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities
Claim 40correlationsupports2019Source 2needs review

Binding affinities of the examined blue-light-inducible dimers correlate with in vivo function measured by colocalization and functional assays.

we examined the biophysical and biochemical properties of three blue-light-inducible dimer variants ... and correlated these characteristics to in vivo colocalization and functional assays. We find that the switches vary dramatically in their dark and lit state binding affinities and that these affinities co...
Claim 41correlationsupports2019Source 2needs review

Binding affinities of the examined blue-light-inducible dimers correlate with in vivo function measured by colocalization and functional assays.

we examined the biophysical and biochemical properties of three blue-light-inducible dimer variants ... and correlated these characteristics to in vivo colocalization and functional assays. We find that the switches vary dramatically in their dark and lit state binding affinities and that these affinities co...
Claim 42correlationsupports2019Source 2needs review

Binding affinities of the examined blue-light-inducible dimers correlate with in vivo function measured by colocalization and functional assays.

we examined the biophysical and biochemical properties of three blue-light-inducible dimer variants ... and correlated these characteristics to in vivo colocalization and functional assays. We find that the switches vary dramatically in their dark and lit state binding affinities and that these affinities co...
Claim 43correlationsupports2019Source 2needs review

Binding affinities of the examined blue-light-inducible dimers correlate with in vivo function measured by colocalization and functional assays.

we examined the biophysical and biochemical properties of three blue-light-inducible dimer variants ... and correlated these characteristics to in vivo colocalization and functional assays. We find that the switches vary dramatically in their dark and lit state binding affinities and that these affinities co...
Claim 44correlationsupports2019Source 2needs review

Binding affinities of the examined blue-light-inducible dimers correlate with in vivo function measured by colocalization and functional assays.

we examined the biophysical and biochemical properties of three blue-light-inducible dimer variants ... and correlated these characteristics to in vivo colocalization and functional assays. We find that the switches vary dramatically in their dark and lit state binding affinities and that these affinities co...
Claim 45correlationsupports2019Source 2needs review

Binding affinities of the examined blue-light-inducible dimers correlate with in vivo function measured by colocalization and functional assays.

we examined the biophysical and biochemical properties of three blue-light-inducible dimer variants ... and correlated these characteristics to in vivo colocalization and functional assays. We find that the switches vary dramatically in their dark and lit state binding affinities and that these affinities co...
Claim 46correlationsupports2019Source 2needs review

Binding affinities of the examined blue-light-inducible dimers correlate with in vivo function measured by colocalization and functional assays.

we examined the biophysical and biochemical properties of three blue-light-inducible dimer variants ... and correlated these characteristics to in vivo colocalization and functional assays. We find that the switches vary dramatically in their dark and lit state binding affinities and that these affinities co...
Claim 47correlationsupports2019Source 2needs review

Binding affinities of the examined blue-light-inducible dimers correlate with in vivo function measured by colocalization and functional assays.

we examined the biophysical and biochemical properties of three blue-light-inducible dimer variants ... and correlated these characteristics to in vivo colocalization and functional assays. We find that the switches vary dramatically in their dark and lit state binding affinities and that these affinities co...
Claim 48correlationsupports2019Source 2needs review

Binding affinities of the examined blue-light-inducible dimers correlate with in vivo function measured by colocalization and functional assays.

we examined the biophysical and biochemical properties of three blue-light-inducible dimer variants ... and correlated these characteristics to in vivo colocalization and functional assays. We find that the switches vary dramatically in their dark and lit state binding affinities and that these affinities co...
Claim 49correlationsupports2019Source 2needs review

Binding affinities of the examined blue-light-inducible dimers correlate with in vivo function measured by colocalization and functional assays.

we examined the biophysical and biochemical properties of three blue-light-inducible dimer variants ... and correlated these characteristics to in vivo colocalization and functional assays. We find that the switches vary dramatically in their dark and lit state binding affinities and that these affinities co...
Claim 50correlationsupports2019Source 2needs review

Binding affinities of the examined blue-light-inducible dimers correlate with in vivo function measured by colocalization and functional assays.

we examined the biophysical and biochemical properties of three blue-light-inducible dimer variants ... and correlated these characteristics to in vivo colocalization and functional assays. We find that the switches vary dramatically in their dark and lit state binding affinities and that these affinities co...
Claim 51correlationsupports2019Source 2needs review

Binding affinities of the examined blue-light-inducible dimers correlate with in vivo function measured by colocalization and functional assays.

we examined the biophysical and biochemical properties of three blue-light-inducible dimer variants ... and correlated these characteristics to in vivo colocalization and functional assays. We find that the switches vary dramatically in their dark and lit state binding affinities and that these affinities co...
Claim 52correlationsupports2019Source 2needs review

Binding affinities of the examined blue-light-inducible dimers correlate with in vivo function measured by colocalization and functional assays.

we examined the biophysical and biochemical properties of three blue-light-inducible dimer variants ... and correlated these characteristics to in vivo colocalization and functional assays. We find that the switches vary dramatically in their dark and lit state binding affinities and that these affinities co...
Claim 53correlationsupports2019Source 2needs review

Binding affinities of the examined blue-light-inducible dimers correlate with in vivo function measured by colocalization and functional assays.

we examined the biophysical and biochemical properties of three blue-light-inducible dimer variants ... and correlated these characteristics to in vivo colocalization and functional assays. We find that the switches vary dramatically in their dark and lit state binding affinities and that these affinities co...
Claim 54correlationsupports2019Source 2needs review

Binding affinities of the examined blue-light-inducible dimers correlate with in vivo function measured by colocalization and functional assays.

we examined the biophysical and biochemical properties of three blue-light-inducible dimer variants ... and correlated these characteristics to in vivo colocalization and functional assays. We find that the switches vary dramatically in their dark and lit state binding affinities and that these affinities co...
Claim 55correlationsupports2019Source 2needs review

Binding affinities of the examined blue-light-inducible dimers correlate with in vivo function measured by colocalization and functional assays.

we examined the biophysical and biochemical properties of three blue-light-inducible dimer variants ... and correlated these characteristics to in vivo colocalization and functional assays. We find that the switches vary dramatically in their dark and lit state binding affinities and that these affinities co...
Claim 56correlationsupports2019Source 2needs review

Binding affinities of the examined blue-light-inducible dimers correlate with in vivo function measured by colocalization and functional assays.

we examined the biophysical and biochemical properties of three blue-light-inducible dimer variants ... and correlated these characteristics to in vivo colocalization and functional assays. We find that the switches vary dramatically in their dark and lit state binding affinities and that these affinities co...
Claim 57comparative performancesupports2018Source 3needs review

Cry2/CIB1, iLID, and Magnets were compared for the extent of light-dependent dimer occurrence in small subcellular volumes.

Here, we compared and quantified the extent of light-dependent dimer occurrence in small, subcellular volumes controlled by three such tools: Cry2/CIB1, iLID, and Magnets.
Claim 58comparative performancesupports2018Source 3needs review

Cry2/CIB1, iLID, and Magnets were compared for the extent of light-dependent dimer occurrence in small subcellular volumes.

Here, we compared and quantified the extent of light-dependent dimer occurrence in small, subcellular volumes controlled by three such tools: Cry2/CIB1, iLID, and Magnets.
Claim 59comparative performancesupports2018Source 3needs review

Cry2/CIB1, iLID, and Magnets were compared for the extent of light-dependent dimer occurrence in small subcellular volumes.

Here, we compared and quantified the extent of light-dependent dimer occurrence in small, subcellular volumes controlled by three such tools: Cry2/CIB1, iLID, and Magnets.
Claim 60comparative performancesupports2018Source 3needs review

Cry2/CIB1, iLID, and Magnets were compared for the extent of light-dependent dimer occurrence in small subcellular volumes.

Here, we compared and quantified the extent of light-dependent dimer occurrence in small, subcellular volumes controlled by three such tools: Cry2/CIB1, iLID, and Magnets.
Claim 61comparative performancesupports2018Source 3needs review

Cry2/CIB1, iLID, and Magnets were compared for the extent of light-dependent dimer occurrence in small subcellular volumes.

Here, we compared and quantified the extent of light-dependent dimer occurrence in small, subcellular volumes controlled by three such tools: Cry2/CIB1, iLID, and Magnets.
Claim 62comparative performancesupports2018Source 3needs review

Cry2/CIB1, iLID, and Magnets were compared for the extent of light-dependent dimer occurrence in small subcellular volumes.

Here, we compared and quantified the extent of light-dependent dimer occurrence in small, subcellular volumes controlled by three such tools: Cry2/CIB1, iLID, and Magnets.
Claim 63comparative performancesupports2018Source 3needs review

Cry2/CIB1, iLID, and Magnets were compared for the extent of light-dependent dimer occurrence in small subcellular volumes.

Here, we compared and quantified the extent of light-dependent dimer occurrence in small, subcellular volumes controlled by three such tools: Cry2/CIB1, iLID, and Magnets.
Claim 64comparative performancesupports2018Source 3needs review

Cry2/CIB1, iLID, and Magnets were compared for the extent of light-dependent dimer occurrence in small subcellular volumes.

Here, we compared and quantified the extent of light-dependent dimer occurrence in small, subcellular volumes controlled by three such tools: Cry2/CIB1, iLID, and Magnets.
Claim 65comparative performancesupports2018Source 3needs review

Cry2/CIB1, iLID, and Magnets were compared for the extent of light-dependent dimer occurrence in small subcellular volumes.

Here, we compared and quantified the extent of light-dependent dimer occurrence in small, subcellular volumes controlled by three such tools: Cry2/CIB1, iLID, and Magnets.
Claim 66comparative performancesupports2018Source 3needs review

Cry2/CIB1, iLID, and Magnets were compared for the extent of light-dependent dimer occurrence in small subcellular volumes.

Here, we compared and quantified the extent of light-dependent dimer occurrence in small, subcellular volumes controlled by three such tools: Cry2/CIB1, iLID, and Magnets.
Claim 67comparative performancesupports2018Source 3needs review

Cry2/CIB1, iLID, and Magnets were compared for the extent of light-dependent dimer occurrence in small subcellular volumes.

Here, we compared and quantified the extent of light-dependent dimer occurrence in small, subcellular volumes controlled by three such tools: Cry2/CIB1, iLID, and Magnets.
Claim 68comparative performancesupports2018Source 3needs review

Cry2/CIB1, iLID, and Magnets were compared for the extent of light-dependent dimer occurrence in small subcellular volumes.

Here, we compared and quantified the extent of light-dependent dimer occurrence in small, subcellular volumes controlled by three such tools: Cry2/CIB1, iLID, and Magnets.
Claim 69comparative performancesupports2018Source 3needs review

Cry2/CIB1, iLID, and Magnets were compared for the extent of light-dependent dimer occurrence in small subcellular volumes.

Here, we compared and quantified the extent of light-dependent dimer occurrence in small, subcellular volumes controlled by three such tools: Cry2/CIB1, iLID, and Magnets.
Claim 70comparative performancesupports2018Source 3needs review

Cry2/CIB1, iLID, and Magnets were compared for the extent of light-dependent dimer occurrence in small subcellular volumes.

Here, we compared and quantified the extent of light-dependent dimer occurrence in small, subcellular volumes controlled by three such tools: Cry2/CIB1, iLID, and Magnets.
Claim 71comparative performancesupports2018Source 3needs review

Cry2/CIB1, iLID, and Magnets were compared for the extent of light-dependent dimer occurrence in small subcellular volumes.

Here, we compared and quantified the extent of light-dependent dimer occurrence in small, subcellular volumes controlled by three such tools: Cry2/CIB1, iLID, and Magnets.
Claim 72comparative performancesupports2018Source 3needs review

Cry2/CIB1, iLID, and Magnets were compared for the extent of light-dependent dimer occurrence in small subcellular volumes.

Here, we compared and quantified the extent of light-dependent dimer occurrence in small, subcellular volumes controlled by three such tools: Cry2/CIB1, iLID, and Magnets.
Claim 73comparative performancesupports2018Source 3needs review

Cry2/CIB1, iLID, and Magnets were compared for the extent of light-dependent dimer occurrence in small subcellular volumes.

Here, we compared and quantified the extent of light-dependent dimer occurrence in small, subcellular volumes controlled by three such tools: Cry2/CIB1, iLID, and Magnets.
Claim 74design rulesupports2018Source 3needs review

Efficient spatial confinement of light-induced dimerization to the illuminated area is achieved when the photosensitive component is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.

Efficient spatial confinement of dimer to the area of illumination is achieved when the photosensitive component of the dimerization pair is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.
Claim 75design rulesupports2018Source 3needs review

Efficient spatial confinement of light-induced dimerization to the illuminated area is achieved when the photosensitive component is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.

Efficient spatial confinement of dimer to the area of illumination is achieved when the photosensitive component of the dimerization pair is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.
Claim 76design rulesupports2018Source 3needs review

Efficient spatial confinement of light-induced dimerization to the illuminated area is achieved when the photosensitive component is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.

Efficient spatial confinement of dimer to the area of illumination is achieved when the photosensitive component of the dimerization pair is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.
Claim 77design rulesupports2018Source 3needs review

Efficient spatial confinement of light-induced dimerization to the illuminated area is achieved when the photosensitive component is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.

Efficient spatial confinement of dimer to the area of illumination is achieved when the photosensitive component of the dimerization pair is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.
Claim 78design rulesupports2018Source 3needs review

Efficient spatial confinement of light-induced dimerization to the illuminated area is achieved when the photosensitive component is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.

Efficient spatial confinement of dimer to the area of illumination is achieved when the photosensitive component of the dimerization pair is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.
Claim 79design rulesupports2018Source 3needs review

Efficient spatial confinement of light-induced dimerization to the illuminated area is achieved when the photosensitive component is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.

Efficient spatial confinement of dimer to the area of illumination is achieved when the photosensitive component of the dimerization pair is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.
Claim 80design rulesupports2018Source 3needs review

Efficient spatial confinement of light-induced dimerization to the illuminated area is achieved when the photosensitive component is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.

Efficient spatial confinement of dimer to the area of illumination is achieved when the photosensitive component of the dimerization pair is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.
Claim 81design rulesupports2018Source 3needs review

Efficient spatial confinement of light-induced dimerization to the illuminated area is achieved when the photosensitive component is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.

Efficient spatial confinement of dimer to the area of illumination is achieved when the photosensitive component of the dimerization pair is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.
Claim 82design rulesupports2018Source 3needs review

Efficient spatial confinement of light-induced dimerization to the illuminated area is achieved when the photosensitive component is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.

Efficient spatial confinement of dimer to the area of illumination is achieved when the photosensitive component of the dimerization pair is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.
Claim 83design rulesupports2018Source 3needs review

Efficient spatial confinement of light-induced dimerization to the illuminated area is achieved when the photosensitive component is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.

Efficient spatial confinement of dimer to the area of illumination is achieved when the photosensitive component of the dimerization pair is tethered to the membrane of intracellular compartments and when on and off kinetics are extremely fast, as achieved with iLID or Magnets.
Claim 84determinant of spatial confinementsupports2018Source 3needs review

The location of the photoreceptor protein in the dimer pair and its switch-off kinetics determine the subcellular volume of dimer formation and the amount of protein recruited in the illuminated volume.

We show that both the location of the photoreceptor protein(s) in the dimer pair and its (their) switch-off kinetics determine the subcellular volume where dimer formation occurs and the amount of protein recruited in the illuminated volume.
Claim 85determinant of spatial confinementsupports2018Source 3needs review

The location of the photoreceptor protein in the dimer pair and its switch-off kinetics determine the subcellular volume of dimer formation and the amount of protein recruited in the illuminated volume.

We show that both the location of the photoreceptor protein(s) in the dimer pair and its (their) switch-off kinetics determine the subcellular volume where dimer formation occurs and the amount of protein recruited in the illuminated volume.
Claim 86determinant of spatial confinementsupports2018Source 3needs review

The location of the photoreceptor protein in the dimer pair and its switch-off kinetics determine the subcellular volume of dimer formation and the amount of protein recruited in the illuminated volume.

We show that both the location of the photoreceptor protein(s) in the dimer pair and its (their) switch-off kinetics determine the subcellular volume where dimer formation occurs and the amount of protein recruited in the illuminated volume.
Claim 87determinant of spatial confinementsupports2018Source 3needs review

The location of the photoreceptor protein in the dimer pair and its switch-off kinetics determine the subcellular volume of dimer formation and the amount of protein recruited in the illuminated volume.

We show that both the location of the photoreceptor protein(s) in the dimer pair and its (their) switch-off kinetics determine the subcellular volume where dimer formation occurs and the amount of protein recruited in the illuminated volume.
Claim 88determinant of spatial confinementsupports2018Source 3needs review

The location of the photoreceptor protein in the dimer pair and its switch-off kinetics determine the subcellular volume of dimer formation and the amount of protein recruited in the illuminated volume.

We show that both the location of the photoreceptor protein(s) in the dimer pair and its (their) switch-off kinetics determine the subcellular volume where dimer formation occurs and the amount of protein recruited in the illuminated volume.
Claim 89determinant of spatial confinementsupports2018Source 3needs review

The location of the photoreceptor protein in the dimer pair and its switch-off kinetics determine the subcellular volume of dimer formation and the amount of protein recruited in the illuminated volume.

We show that both the location of the photoreceptor protein(s) in the dimer pair and its (their) switch-off kinetics determine the subcellular volume where dimer formation occurs and the amount of protein recruited in the illuminated volume.
Claim 90determinant of spatial confinementsupports2018Source 3needs review

The location of the photoreceptor protein in the dimer pair and its switch-off kinetics determine the subcellular volume of dimer formation and the amount of protein recruited in the illuminated volume.

We show that both the location of the photoreceptor protein(s) in the dimer pair and its (their) switch-off kinetics determine the subcellular volume where dimer formation occurs and the amount of protein recruited in the illuminated volume.
Claim 91determinant of spatial confinementsupports2018Source 3needs review

The location of the photoreceptor protein in the dimer pair and its switch-off kinetics determine the subcellular volume of dimer formation and the amount of protein recruited in the illuminated volume.

We show that both the location of the photoreceptor protein(s) in the dimer pair and its (their) switch-off kinetics determine the subcellular volume where dimer formation occurs and the amount of protein recruited in the illuminated volume.
Claim 92determinant of spatial confinementsupports2018Source 3needs review

The location of the photoreceptor protein in the dimer pair and its switch-off kinetics determine the subcellular volume of dimer formation and the amount of protein recruited in the illuminated volume.

We show that both the location of the photoreceptor protein(s) in the dimer pair and its (their) switch-off kinetics determine the subcellular volume where dimer formation occurs and the amount of protein recruited in the illuminated volume.
Claim 93determinant of spatial confinementsupports2018Source 3needs review

The location of the photoreceptor protein in the dimer pair and its switch-off kinetics determine the subcellular volume of dimer formation and the amount of protein recruited in the illuminated volume.

We show that both the location of the photoreceptor protein(s) in the dimer pair and its (their) switch-off kinetics determine the subcellular volume where dimer formation occurs and the amount of protein recruited in the illuminated volume.
Claim 94determinant of spatial confinementsupports2018Source 3needs review

The location of the photoreceptor protein in the dimer pair and its switch-off kinetics determine the subcellular volume of dimer formation and the amount of protein recruited in the illuminated volume.

We show that both the location of the photoreceptor protein(s) in the dimer pair and its (their) switch-off kinetics determine the subcellular volume where dimer formation occurs and the amount of protein recruited in the illuminated volume.
Claim 95determinant of spatial confinementsupports2018Source 3needs review

The location of the photoreceptor protein in the dimer pair and its switch-off kinetics determine the subcellular volume of dimer formation and the amount of protein recruited in the illuminated volume.

We show that both the location of the photoreceptor protein(s) in the dimer pair and its (their) switch-off kinetics determine the subcellular volume where dimer formation occurs and the amount of protein recruited in the illuminated volume.
Claim 96determinant of spatial confinementsupports2018Source 3needs review

The location of the photoreceptor protein in the dimer pair and its switch-off kinetics determine the subcellular volume of dimer formation and the amount of protein recruited in the illuminated volume.

We show that both the location of the photoreceptor protein(s) in the dimer pair and its (their) switch-off kinetics determine the subcellular volume where dimer formation occurs and the amount of protein recruited in the illuminated volume.
Claim 97determinant of spatial confinementsupports2018Source 3needs review

The location of the photoreceptor protein in the dimer pair and its switch-off kinetics determine the subcellular volume of dimer formation and the amount of protein recruited in the illuminated volume.

We show that both the location of the photoreceptor protein(s) in the dimer pair and its (their) switch-off kinetics determine the subcellular volume where dimer formation occurs and the amount of protein recruited in the illuminated volume.
Claim 98determinant of spatial confinementsupports2018Source 3needs review

The location of the photoreceptor protein in the dimer pair and its switch-off kinetics determine the subcellular volume of dimer formation and the amount of protein recruited in the illuminated volume.

We show that both the location of the photoreceptor protein(s) in the dimer pair and its (their) switch-off kinetics determine the subcellular volume where dimer formation occurs and the amount of protein recruited in the illuminated volume.
Claim 99determinant of spatial confinementsupports2018Source 3needs review

The location of the photoreceptor protein in the dimer pair and its switch-off kinetics determine the subcellular volume of dimer formation and the amount of protein recruited in the illuminated volume.

We show that both the location of the photoreceptor protein(s) in the dimer pair and its (their) switch-off kinetics determine the subcellular volume where dimer formation occurs and the amount of protein recruited in the illuminated volume.
Claim 100determinant of spatial confinementsupports2018Source 3needs review

The location of the photoreceptor protein in the dimer pair and its switch-off kinetics determine the subcellular volume of dimer formation and the amount of protein recruited in the illuminated volume.

We show that both the location of the photoreceptor protein(s) in the dimer pair and its (their) switch-off kinetics determine the subcellular volume where dimer formation occurs and the amount of protein recruited in the illuminated volume.
Claim 101tradeoffsupports2018Source 3needs review

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, but with reduced total amount of dimer.

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, although this comes at the expense of the total amount of dimer.
Claim 102tradeoffsupports2018Source 3needs review

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, but with reduced total amount of dimer.

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, although this comes at the expense of the total amount of dimer.
Claim 103tradeoffsupports2018Source 3needs review

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, but with reduced total amount of dimer.

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, although this comes at the expense of the total amount of dimer.
Claim 104tradeoffsupports2018Source 3needs review

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, but with reduced total amount of dimer.

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, although this comes at the expense of the total amount of dimer.
Claim 105tradeoffsupports2018Source 3needs review

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, but with reduced total amount of dimer.

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, although this comes at the expense of the total amount of dimer.
Claim 106tradeoffsupports2018Source 3needs review

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, but with reduced total amount of dimer.

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, although this comes at the expense of the total amount of dimer.
Claim 107tradeoffsupports2018Source 3needs review

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, but with reduced total amount of dimer.

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, although this comes at the expense of the total amount of dimer.
Claim 108tradeoffsupports2018Source 3needs review

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, but with reduced total amount of dimer.

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, although this comes at the expense of the total amount of dimer.
Claim 109tradeoffsupports2018Source 3needs review

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, but with reduced total amount of dimer.

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, although this comes at the expense of the total amount of dimer.
Claim 110tradeoffsupports2018Source 3needs review

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, but with reduced total amount of dimer.

Magnets and the iLID variants with the fastest switch-off kinetics induce and maintain protein dimerization in the smallest volume, although this comes at the expense of the total amount of dimer.
Claim 111application scopesupports2017Source 10needs review

The optimized FKF1/GI- and CRY2/CIB1-based systems are presented as widely applicable for light-dependent control of transcription in mammalian cells.

The improvements regarding the FKF1/GI- and CRY2/CIB1-based systems will be widely applicable for the light-dependent control of transcription in mammalian cells.
Claim 112tool optimizationsupports2017Source 10needs review

CRY2/CIB1-based light-inducible transcription was improved by split construct optimization in mammalian cells.

In addition, we have improved the CRY2/CIB1-based light-inducible transcription with split construct optimization.
Claim 113optimization reportsupports2016Source 4needs review

The paper reports optimized second-generation CRY2–CIB dimerizers.

Claim 114optimization reportsupports2016Source 4needs review

The paper reports optimized second-generation CRY2–CIB dimerizers.

Claim 115optimization reportsupports2016Source 4needs review

The paper reports optimized second-generation CRY2–CIB dimerizers.

Claim 116optimization reportsupports2016Source 4needs review

The paper reports optimized second-generation CRY2–CIB dimerizers.

Claim 117optimization reportsupports2016Source 4needs review

The paper reports optimized second-generation CRY2–CIB dimerizers.

Claim 118optimization reportsupports2016Source 4needs review

The paper reports optimized second-generation CRY2–CIB dimerizers.

Claim 119optimization reportsupports2016Source 4needs review

The paper reports optimized second-generation CRY2–CIB dimerizers.

Claim 120optimization reportsupports2016Source 4needs review

The paper reports optimized second-generation CRY2–CIB dimerizers.

Claim 121optimization reportsupports2016Source 4needs review

The paper reports optimized second-generation CRY2–CIB dimerizers.

Claim 122optimization reportsupports2016Source 4needs review

The paper reports optimized second-generation CRY2–CIB dimerizers.

Claim 123optimization reportsupports2016Source 4needs review

The paper reports optimized second-generation CRY2–CIB dimerizers.

Claim 124optimization reportsupports2016Source 4needs review

The paper reports optimized second-generation CRY2–CIB dimerizers.

Claim 125optimization reportsupports2016Source 4needs review

The paper reports optimized second-generation CRY2–CIB dimerizers.

Claim 126optimization reportsupports2016Source 4needs review

The paper reports optimized second-generation CRY2–CIB dimerizers.

Claim 127optimization reportsupports2016Source 4needs review

The paper reports optimized second-generation CRY2–CIB dimerizers.

Claim 128optimization reportsupports2016Source 4needs review

The paper reports optimized second-generation CRY2–CIB dimerizers.

Claim 129optimization reportsupports2016Source 4needs review

The paper reports optimized second-generation CRY2–CIB dimerizers.

Claim 130optimization reportsupports2016Source 4needs review

The paper reports optimized second-generation CRY2–CIB dimerizers.

Claim 131optimization reportsupports2016Source 4needs review

The paper reports optimized second-generation CRY2–CIB dimerizers.

Claim 132optimization reportsupports2016Source 4needs review

The paper reports optimized second-generation CRY2–CIB dimerizers.

Claim 133optimization reportsupports2016Source 4needs review

The paper reports optimized second-generation CRY2–CIB dimerizers.

Claim 134optimization reportsupports2016Source 4needs review

The paper reports optimized second-generation CRY2–CIB dimerizers.

Claim 135optimization reportsupports2016Source 4needs review

The paper reports optimized second-generation CRY2–CIB dimerizers.

Claim 136optimization reportsupports2016Source 4needs review

The paper reports optimized second-generation CRY2–CIB dimerizers.

Claim 137optimization reportsupports2016Source 4needs review

The paper reports optimized second-generation CRY2–CIB dimerizers.

Claim 138optimization reportsupports2016Source 4needs review

The paper reports optimized second-generation CRY2–CIB dimerizers.

Claim 139optimization reportsupports2016Source 4needs review

The paper reports optimized second-generation CRY2–CIB dimerizers.

Claim 140tool reportsupports2016Source 4needs review

The paper reports a photoactivatable Cre recombinase.

Claim 141tool reportsupports2016Source 4needs review

The paper reports a photoactivatable Cre recombinase.

Claim 142tool reportsupports2016Source 4needs review

The paper reports a photoactivatable Cre recombinase.

Claim 143tool reportsupports2016Source 4needs review

The paper reports a photoactivatable Cre recombinase.

Claim 144tool reportsupports2016Source 4needs review

The paper reports a photoactivatable Cre recombinase.

Claim 145tool reportsupports2016Source 4needs review

The paper reports a photoactivatable Cre recombinase.

Claim 146tool reportsupports2016Source 4needs review

The paper reports a photoactivatable Cre recombinase.

Claim 147tool reportsupports2016Source 4needs review

The paper reports a photoactivatable Cre recombinase.

Claim 148tool reportsupports2016Source 4needs review

The paper reports a photoactivatable Cre recombinase.

Claim 149tool reportsupports2016Source 4needs review

The paper reports a photoactivatable Cre recombinase.

Claim 150tool reportsupports2016Source 4needs review

The paper reports a photoactivatable Cre recombinase.

Claim 151tool reportsupports2016Source 4needs review

The paper reports a photoactivatable Cre recombinase.

Claim 152tool reportsupports2016Source 4needs review

The paper reports a photoactivatable Cre recombinase.

Claim 153tool reportsupports2016Source 4needs review

The paper reports a photoactivatable Cre recombinase.

Claim 154tool reportsupports2016Source 4needs review

The paper reports a photoactivatable Cre recombinase.

Claim 155tool reportsupports2016Source 4needs review

The paper reports a photoactivatable Cre recombinase.

Claim 156tool reportsupports2016Source 4needs review

The paper reports a photoactivatable Cre recombinase.

Claim 157tool reportsupports2016Source 4needs review

The paper reports a photoactivatable Cre recombinase.

Claim 158tool reportsupports2016Source 4needs review

The paper reports a photoactivatable Cre recombinase.

Claim 159tool reportsupports2016Source 4needs review

The paper reports a photoactivatable Cre recombinase.

Claim 160assay applicationsupports2015Source 1needs review

The examined dimers were evaluated in in vivo assays including transcription control, intracellular localization studies, and control of GTPase signaling.

in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling
Claim 161assay applicationsupports2015Source 1needs review

The examined dimers were evaluated in in vivo assays including transcription control, intracellular localization studies, and control of GTPase signaling.

in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling
Claim 162assay applicationsupports2015Source 1needs review

The examined dimers were evaluated in in vivo assays including transcription control, intracellular localization studies, and control of GTPase signaling.

in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling
Claim 163assay applicationsupports2015Source 1needs review

The examined dimers were evaluated in in vivo assays including transcription control, intracellular localization studies, and control of GTPase signaling.

in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling
Claim 164assay applicationsupports2015Source 1needs review

The examined dimers were evaluated in in vivo assays including transcription control, intracellular localization studies, and control of GTPase signaling.

in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling
Claim 165assay applicationsupports2015Source 1needs review

The examined dimers were evaluated in in vivo assays including transcription control, intracellular localization studies, and control of GTPase signaling.

in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling
Claim 166assay applicationsupports2015Source 1needs review

The examined dimers were evaluated in in vivo assays including transcription control, intracellular localization studies, and control of GTPase signaling.

in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling
Claim 167assay applicationsupports2015Source 1needs review

The examined dimers were evaluated in in vivo assays including transcription control, intracellular localization studies, and control of GTPase signaling.

in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling
Claim 168assay applicationsupports2015Source 1needs review

The examined dimers were evaluated in in vivo assays including transcription control, intracellular localization studies, and control of GTPase signaling.

in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling
Claim 169assay applicationsupports2015Source 1needs review

The examined dimers were evaluated in in vivo assays including transcription control, intracellular localization studies, and control of GTPase signaling.

in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling
Claim 170assay applicationsupports2015Source 1needs review

The examined dimers were evaluated in in vivo assays including transcription control, intracellular localization studies, and control of GTPase signaling.

in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling
Claim 171assay applicationsupports2015Source 1needs review

The examined dimers were evaluated in in vivo assays including transcription control, intracellular localization studies, and control of GTPase signaling.

in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling
Claim 172assay applicationsupports2015Source 1needs review

The examined dimers were evaluated in in vivo assays including transcription control, intracellular localization studies, and control of GTPase signaling.

in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling
Claim 173assay applicationsupports2015Source 1needs review

The examined dimers were evaluated in in vivo assays including transcription control, intracellular localization studies, and control of GTPase signaling.

in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling
Claim 174assay applicationsupports2015Source 1needs review

The examined dimers were evaluated in in vivo assays including transcription control, intracellular localization studies, and control of GTPase signaling.

in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling
Claim 175assay applicationsupports2015Source 1needs review

The examined dimers were evaluated in in vivo assays including transcription control, intracellular localization studies, and control of GTPase signaling.

in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling
Claim 176assay applicationsupports2015Source 1needs review

The examined dimers were evaluated in in vivo assays including transcription control, intracellular localization studies, and control of GTPase signaling.

in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling
Claim 177comparative characterizationsupports2015Source 1needs review

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities
Claim 178comparative characterizationsupports2015Source 1needs review

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities
Claim 179comparative characterizationsupports2015Source 1needs review

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities
Claim 180comparative characterizationsupports2015Source 1needs review

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities
Claim 181comparative characterizationsupports2015Source 1needs review

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities
Claim 182comparative characterizationsupports2015Source 1needs review

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities
Claim 183comparative characterizationsupports2015Source 1needs review

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities
Claim 184comparative characterizationsupports2015Source 1needs review

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities
Claim 185comparative characterizationsupports2015Source 1needs review

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities
Claim 186comparative characterizationsupports2015Source 1needs review

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities
Claim 187comparative characterizationsupports2015Source 1needs review

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities
Claim 188comparative characterizationsupports2015Source 1needs review

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities
Claim 189comparative characterizationsupports2015Source 1needs review

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities
Claim 190comparative characterizationsupports2015Source 1needs review

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities
Claim 191comparative characterizationsupports2015Source 1needs review

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities
Claim 192comparative characterizationsupports2015Source 1needs review

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities
Claim 193comparative characterizationsupports2015Source 1needs review

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities
Claim 194correlationsupports2015Source 1needs review

Binding affinities of the examined blue-light-inducible dimers correlate with activity changes in in vivo assays.

these affinities correlate with activity changes in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling
Claim 195correlationsupports2015Source 1needs review

Binding affinities of the examined blue-light-inducible dimers correlate with activity changes in in vivo assays.

these affinities correlate with activity changes in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling
Claim 196correlationsupports2015Source 1needs review

Binding affinities of the examined blue-light-inducible dimers correlate with activity changes in in vivo assays.

these affinities correlate with activity changes in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling
Claim 197correlationsupports2015Source 1needs review

Binding affinities of the examined blue-light-inducible dimers correlate with activity changes in in vivo assays.

these affinities correlate with activity changes in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling
Claim 198correlationsupports2015Source 1needs review

Binding affinities of the examined blue-light-inducible dimers correlate with activity changes in in vivo assays.

these affinities correlate with activity changes in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling
Claim 199correlationsupports2015Source 1needs review

Binding affinities of the examined blue-light-inducible dimers correlate with activity changes in in vivo assays.

these affinities correlate with activity changes in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling
Claim 200correlationsupports2015Source 1needs review

Binding affinities of the examined blue-light-inducible dimers correlate with activity changes in in vivo assays.

these affinities correlate with activity changes in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling
Claim 201correlationsupports2015Source 1needs review

Binding affinities of the examined blue-light-inducible dimers correlate with activity changes in in vivo assays.

these affinities correlate with activity changes in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling
Claim 202correlationsupports2015Source 1needs review

Binding affinities of the examined blue-light-inducible dimers correlate with activity changes in in vivo assays.

these affinities correlate with activity changes in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling
Claim 203correlationsupports2015Source 1needs review

Binding affinities of the examined blue-light-inducible dimers correlate with activity changes in in vivo assays.

these affinities correlate with activity changes in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling
Claim 204correlationsupports2015Source 1needs review

Binding affinities of the examined blue-light-inducible dimers correlate with activity changes in in vivo assays.

these affinities correlate with activity changes in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling
Claim 205correlationsupports2015Source 1needs review

Binding affinities of the examined blue-light-inducible dimers correlate with activity changes in in vivo assays.

these affinities correlate with activity changes in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling
Claim 206correlationsupports2015Source 1needs review

Binding affinities of the examined blue-light-inducible dimers correlate with activity changes in in vivo assays.

these affinities correlate with activity changes in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling
Claim 207correlationsupports2015Source 1needs review

Binding affinities of the examined blue-light-inducible dimers correlate with activity changes in in vivo assays.

these affinities correlate with activity changes in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling
Claim 208correlationsupports2015Source 1needs review

Binding affinities of the examined blue-light-inducible dimers correlate with activity changes in in vivo assays.

these affinities correlate with activity changes in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling
Claim 209correlationsupports2015Source 1needs review

Binding affinities of the examined blue-light-inducible dimers correlate with activity changes in in vivo assays.

these affinities correlate with activity changes in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling
Claim 210correlationsupports2015Source 1needs review

Binding affinities of the examined blue-light-inducible dimers correlate with activity changes in in vivo assays.

these affinities correlate with activity changes in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling
Claim 211mechanistic effectsupports2015Source 1needs review

For CRY2, light-induced changes in homo-oligomerization can significantly affect activity and are sensitive to alternative fusion strategies.

Additionally, for CRY2, we observe that light-induced changes in homo-oligomerization can have significant effects on activity that are sensitive to alternative fusion strategies.
Claim 212mechanistic effectsupports2015Source 1needs review

For CRY2, light-induced changes in homo-oligomerization can significantly affect activity and are sensitive to alternative fusion strategies.

Additionally, for CRY2, we observe that light-induced changes in homo-oligomerization can have significant effects on activity that are sensitive to alternative fusion strategies.
Claim 213mechanistic effectsupports2015Source 1needs review

For CRY2, light-induced changes in homo-oligomerization can significantly affect activity and are sensitive to alternative fusion strategies.

Additionally, for CRY2, we observe that light-induced changes in homo-oligomerization can have significant effects on activity that are sensitive to alternative fusion strategies.
Claim 214mechanistic effectsupports2015Source 1needs review

For CRY2, light-induced changes in homo-oligomerization can significantly affect activity and are sensitive to alternative fusion strategies.

Additionally, for CRY2, we observe that light-induced changes in homo-oligomerization can have significant effects on activity that are sensitive to alternative fusion strategies.
Claim 215mechanistic effectsupports2015Source 1needs review

For CRY2, light-induced changes in homo-oligomerization can significantly affect activity and are sensitive to alternative fusion strategies.

Additionally, for CRY2, we observe that light-induced changes in homo-oligomerization can have significant effects on activity that are sensitive to alternative fusion strategies.
Claim 216mechanistic effectsupports2015Source 1needs review

For CRY2, light-induced changes in homo-oligomerization can significantly affect activity and are sensitive to alternative fusion strategies.

Additionally, for CRY2, we observe that light-induced changes in homo-oligomerization can have significant effects on activity that are sensitive to alternative fusion strategies.
Claim 217mechanistic effectsupports2015Source 1needs review

For CRY2, light-induced changes in homo-oligomerization can significantly affect activity and are sensitive to alternative fusion strategies.

Additionally, for CRY2, we observe that light-induced changes in homo-oligomerization can have significant effects on activity that are sensitive to alternative fusion strategies.
Claim 218mechanistic effectsupports2015Source 1needs review

For CRY2, light-induced changes in homo-oligomerization can significantly affect activity and are sensitive to alternative fusion strategies.

Additionally, for CRY2, we observe that light-induced changes in homo-oligomerization can have significant effects on activity that are sensitive to alternative fusion strategies.
Claim 219mechanistic effectsupports2015Source 1needs review

For CRY2, light-induced changes in homo-oligomerization can significantly affect activity and are sensitive to alternative fusion strategies.

Additionally, for CRY2, we observe that light-induced changes in homo-oligomerization can have significant effects on activity that are sensitive to alternative fusion strategies.
Claim 220mechanistic effectsupports2015Source 1needs review

For CRY2, light-induced changes in homo-oligomerization can significantly affect activity and are sensitive to alternative fusion strategies.

Additionally, for CRY2, we observe that light-induced changes in homo-oligomerization can have significant effects on activity that are sensitive to alternative fusion strategies.
Claim 221mechanistic effectsupports2015Source 1needs review

For CRY2, light-induced changes in homo-oligomerization can significantly affect activity and are sensitive to alternative fusion strategies.

Additionally, for CRY2, we observe that light-induced changes in homo-oligomerization can have significant effects on activity that are sensitive to alternative fusion strategies.
Claim 222mechanistic effectsupports2015Source 1needs review

For CRY2, light-induced changes in homo-oligomerization can significantly affect activity and are sensitive to alternative fusion strategies.

Additionally, for CRY2, we observe that light-induced changes in homo-oligomerization can have significant effects on activity that are sensitive to alternative fusion strategies.
Claim 223mechanistic effectsupports2015Source 1needs review

For CRY2, light-induced changes in homo-oligomerization can significantly affect activity and are sensitive to alternative fusion strategies.

Additionally, for CRY2, we observe that light-induced changes in homo-oligomerization can have significant effects on activity that are sensitive to alternative fusion strategies.
Claim 224mechanistic effectsupports2015Source 1needs review

For CRY2, light-induced changes in homo-oligomerization can significantly affect activity and are sensitive to alternative fusion strategies.

Additionally, for CRY2, we observe that light-induced changes in homo-oligomerization can have significant effects on activity that are sensitive to alternative fusion strategies.
Claim 225mechanistic effectsupports2015Source 1needs review

For CRY2, light-induced changes in homo-oligomerization can significantly affect activity and are sensitive to alternative fusion strategies.

Additionally, for CRY2, we observe that light-induced changes in homo-oligomerization can have significant effects on activity that are sensitive to alternative fusion strategies.
Claim 226mechanistic effectsupports2015Source 1needs review

For CRY2, light-induced changes in homo-oligomerization can significantly affect activity and are sensitive to alternative fusion strategies.

Additionally, for CRY2, we observe that light-induced changes in homo-oligomerization can have significant effects on activity that are sensitive to alternative fusion strategies.
Claim 227mechanistic effectsupports2015Source 1needs review

For CRY2, light-induced changes in homo-oligomerization can significantly affect activity and are sensitive to alternative fusion strategies.

Additionally, for CRY2, we observe that light-induced changes in homo-oligomerization can have significant effects on activity that are sensitive to alternative fusion strategies.
Claim 228application demosupports2014Source 11needs review

CRY2/CIB dimerizers were successfully applied using a membrane-tethered CRY2 configuration, which may allow better local control of protein interactions.

we demonstrate successful application of the CRY2/CIB dimerizers using a membrane-tethered CRY2, which may allow for better local control of protein interactions
Claim 229background activity comparisonsupports2014Source 11needs review

CRY2/CIB1 showed slightly less background activity in the dark than the TULIP system during regulation of a yeast MAPK signaling pathway.

with slightly less background activity in the dark observed with CRY2/CIB
Claim 230benchmark resultsupports2014Source 11needs review

CRY2/CIB1 and TULIPs showed similar responses in a yeast transcriptional assay.

but similar responses between the CRY2/CIB and TULIP systems
Claim 231mechanism summarysupports2014Source 6needs review

Photoreceptor-based optogenetic tools in this review rely on light-dependent reversible binding to specific interaction partners.

Claim 232pathway regulation comparisonsupports2014Source 11needs review

CRY2/CIB1 and TULIP systems showed similar responses when used to regulate a yeast MAPK signaling pathway.

Further comparison of the ability of the CRY2/CIB1 and TULIP systems to regulate a yeast MAPK signaling pathway also showed similar responses

Approval Evidence

9 sources19 linked approval claimsfirst-pass slugs cry2-cib1, cry2-cib-dimerizers
the photoreceptor CRY2 and its interacting partner CIB1 plasmid

Source:

three blue-light-inducible dimer variants (cryptochrome2 (CRY2)/CIB1, iLID/SspB, and LOVpep/ePDZb)

Source:

Here, we compared and quantified the extent of light-dependent dimer occurrence in small, subcellular volumes controlled by three such tools: Cry2/CIB1, iLID, and Magnets.

Source:

Explicitly supported in the supplied web research summary as a named optogenetic interaction module aligned with the review scope.

Source:

Optimized second-generation CRY2–CIB dimerizers and photoactivatable Cre recombinase

Source:

three blue-light-inducible dimer variants (cryptochrome2 (CRY2)/CIB1, iLID/SspB, and LOVpep/ePDZb)

Source:

The supplied source summary states that the review frames optimization around major photosensory modules including CRY2/CIB1.

Source:

Here, we set about to systematically benchmark the properties of four optical dimerizer systems, CRY2/CIB1, TULIPs, phyB/PIF3, and phyB/PIF6.

Source:

These tools are based on photoreceptors such as ... cryptochrome 2 ... that reversibly bind to specific interaction partners in a light-dependent manner.

Source:

application demonstrationsupports

Camouflage nanoparticle-based vectors were demonstrated for in situ bioluminescence-driven optogenetic therapy of retinoblastoma.

Herein, we present the demonstration of camouflage nanoparticle-based vectors for in situ bioluminescence-driven optogenetic therapy of retinoblastoma. To conduct proof-of-concept research, this study employs a mouse model of retinoblastoma.

Source:

comparative efficacysupports

Compared with external blue light irradiation, the developed system inhibited tumor growth with greater therapeutic efficacy and significantly reduced ocular tumor size.

In comparison to external blue light irradiation, the developed system enables an in situ bioluminescence-activated apoptotic pathway to inhibit tumor growth with greater therapeutic efficacy, resulting in a significant reduction in ocular tumor size.

Source:

safety comparisonsupports

Unlike external blue light irradiation, the camouflage nanoparticle-based optogenetic system maintained retinal structural integrity and avoided corneal neovascularization.

Furthermore, unlike external blue light irradiation, which causes retinal damage and corneal neovascularization, the camouflage nanoparticle-based optogenetic system maintains retinal structural integrity while avoiding corneal neovascularization.

Source:

capabilitysupports

Light-inducible dimers can be used to control protein localization and activity with high spatial and temporal resolution for cellular optogenetics.

Light-inducible dimers are powerful tools for cellular optogenetics, as they can be used to control the localization and activity of proteins with high spatial and temporal resolution.

Source:

comparative propertysupports

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities

Source:

correlationsupports

Binding affinities of the examined blue-light-inducible dimers correlate with in vivo function measured by colocalization and functional assays.

we examined the biophysical and biochemical properties of three blue-light-inducible dimer variants ... and correlated these characteristics to in vivo colocalization and functional assays. We find that the switches vary dramatically in their dark and lit state binding affinities and that these affinities co...

Source:

comparative performancesupports

Cry2/CIB1, iLID, and Magnets were compared for the extent of light-dependent dimer occurrence in small subcellular volumes.

Here, we compared and quantified the extent of light-dependent dimer occurrence in small, subcellular volumes controlled by three such tools: Cry2/CIB1, iLID, and Magnets.

Source:

determinant of spatial confinementsupports

The location of the photoreceptor protein in the dimer pair and its switch-off kinetics determine the subcellular volume of dimer formation and the amount of protein recruited in the illuminated volume.

We show that both the location of the photoreceptor protein(s) in the dimer pair and its (their) switch-off kinetics determine the subcellular volume where dimer formation occurs and the amount of protein recruited in the illuminated volume.

Source:

optimization reportsupports

The paper reports optimized second-generation CRY2–CIB dimerizers.

Source:

assay applicationsupports

The examined dimers were evaluated in in vivo assays including transcription control, intracellular localization studies, and control of GTPase signaling.

in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling

Source:

comparative characterizationsupports

CRY2/CIB1, iLID/SspB, and LOVpep/ePDZb vary dramatically in their dark-state and lit-state binding affinities.

We find that the switches vary dramatically in their dark and lit state binding affinities

Source:

correlationsupports

Binding affinities of the examined blue-light-inducible dimers correlate with activity changes in in vivo assays.

these affinities correlate with activity changes in a variety of in vivo assays, including transcription control, intracellular localization studies, and control of GTPase signaling

Source:

mechanistic effectsupports

For CRY2, light-induced changes in homo-oligomerization can significantly affect activity and are sensitive to alternative fusion strategies.

Additionally, for CRY2, we observe that light-induced changes in homo-oligomerization can have significant effects on activity that are sensitive to alternative fusion strategies.

Source:

module family coveragesupports

The review covers CRY2/CIB1, LOV-domain systems, phytochrome/PIF systems, and Dronpa-based designs as major photosensory modules relevant to optogenetic construct optimization.

Source:

application demosupports

CRY2/CIB dimerizers were successfully applied using a membrane-tethered CRY2 configuration, which may allow better local control of protein interactions.

we demonstrate successful application of the CRY2/CIB dimerizers using a membrane-tethered CRY2, which may allow for better local control of protein interactions

Source:

background activity comparisonsupports

CRY2/CIB1 showed slightly less background activity in the dark than the TULIP system during regulation of a yeast MAPK signaling pathway.

with slightly less background activity in the dark observed with CRY2/CIB

Source:

benchmark resultsupports

CRY2/CIB1 and TULIPs showed similar responses in a yeast transcriptional assay.

but similar responses between the CRY2/CIB and TULIP systems

Source:

mechanism summarysupports

Photoreceptor-based optogenetic tools in this review rely on light-dependent reversible binding to specific interaction partners.

Source:

pathway regulation comparisonsupports

CRY2/CIB1 and TULIP systems showed similar responses when used to regulate a yeast MAPK signaling pathway.

Further comparison of the ability of the CRY2/CIB1 and TULIP systems to regulate a yeast MAPK signaling pathway also showed similar responses

Source:

Comparisons

Source-backed strengths

The tool is explicitly described as a blue-light-inducible dimer system and as one of several optical dimerizers benchmarked in vitro and in vivo. It has been used in Schizosaccharomyces pombe for acute plasma-membrane recruitment, where recruitment and clustering of cytosolic Cdc42 alleles produced moderate activation on cell sides, and the broader literature cited includes optimized second-generation CRY2-CIB dimerizers.

Source:

We find that the switches vary dramatically in their dark and lit state binding affinities

Source:

Here, we compared and quantified the extent of light-dependent dimer occurrence in small, subcellular volumes controlled by three such tools: Cry2/CIB1, iLID, and Magnets.

Source:

The paper reports optimized second-generation CRY2–CIB dimerizers.

Source:

We find that the switches vary dramatically in their dark and lit state binding affinities

Compared with iLID/SspB

CRY2/CIB1 and iLID/SspB address a similar problem space because they share localization, recombination, signaling, transcription.

Shared frame: same top-level item type; shared target processes: localization, recombination, signaling, transcription; shared mechanisms: heterodimerization; same primary input modality: light

Compared with LOVpep/ePDZb

CRY2/CIB1 and LOVpep/ePDZb address a similar problem space because they share localization, signaling, transcription.

Shared frame: same top-level item type; shared target processes: localization, signaling, transcription; shared mechanisms: heterodimerization; same primary input modality: light

Strengths here: appears more independently replicated.

CRY2/CIB1 and single-component optogenetic tools for inducible RhoA GTPase signaling address a similar problem space because they share localization, recombination, signaling, transcription.

Shared frame: same top-level item type; shared target processes: localization, recombination, signaling, transcription; shared mechanisms: heterodimerization; same primary input modality: light

Strengths here: appears more independently replicated; looks easier to implement in practice.

Ranked Citations

  1. 1.
    StructuralSource 1ACS Synthetic Biology2015Claim 176Claim 161Claim 162

    Extracted from this source document.

  2. 2.
    StructuralSource 2Figshare2019Claim 6Claim 21Claim 8

    Extracted from this source document.

  3. 3.
    StructuralSource 3Proceedings of the National Academy of Sciences2018Claim 73Claim 58Claim 59

    Extracted from this source document.

  4. 4.
    StructuralSource 4Nature Chemical Biology2016Claim 113Claim 139Claim 139

    Seeded from load plan for claim c1. Extracted from this source document.

  5. 5.
    StructuralSource 5Journal of Experimental Neuroscience2017

    Extracted from this source document.

  6. 6.
    StructuralSource 6Biotechnology Journal2014Claim 231

    Extracted from this source document. Seeded from load plan for claim cl2.

Curation Status

Seed dossier — not yet curator-complete

  • Validation rollups and replication scores are pending ingestion
  • Citation list may be incomplete or contain placeholders
  • Observation table will populate once evidence is curated