Toolkit/dCas9-miniRecTE
dCas9-miniRecTE
Taxonomy: Mechanism Branch / Architecture. Workflows sit above the mechanism and technique branches rather than replacing them.
Summary
we developed a dCas9-miniRecTE editor that enhances large-fragment integration without introducing double-strand breaks in human cells and primary mouse neurons, achieving ∼20% kilobase-scale knock-in efficiency.
Usefulness & Problems
No literature-backed usefulness or problem-fit explainer has been materialized for this record yet.
Published Workflows
Objective: Develop compact bacterial recombination-based tools that improve kilobase-scale knock-in and large-fragment integration in mammalian cells.
Why it works: The abstract frames bacterial recombineering proteins as potential solutions to inefficient mammalian HDR and reports that targeted recruitment of EcRecE and engineering of a dCas9-miniRecTE editor improve kilobase-scale integration.
Stages
- 1.EcRecE identification and recruitment-based HDR testing(functional_characterization)
This stage establishes whether EcRecE is an effective mammalian HDR enhancer before building a more complex editor.
Selection: Ability of targeted EcRecE recruitment via CRISPR/Cas9 to increase HDR efficiency in mammalian cells.
- 2.Functional domain engineering of dCas9-miniRecTE(library_design)
This stage converts the initial HDR-enhancing concept into an engineered editor intended to support DSB-free integration.
Selection: Combine EcRecE-related engineering with RecT and dCas9 to create a large-fragment integration editor.
- 3.Cellular validation of dCas9-miniRecTE(confirmatory_validation)
This stage confirms that the engineered editor functions in human cells and primary mouse neurons for the intended large-fragment integration task.
Selection: Demonstrate DSB-free kilobase-scale knock-in in relevant mammalian cell contexts.
Steps
- 1.Test CRISPR/Cas9-targeted recruitment of EcRecE in mammalian HDR assaysHDR-enhancing recombination component
Determine whether EcRecE can enhance mammalian HDR and kilobase-scale integration.
The abstract presents EcRecE identification as the first result needed before engineering a more complex editor.
- 2.Engineer a dCas9-miniRecTE construct from EcRecE-related design, RecT, and dCas9engineered editor
Create a DSB-free large-fragment integration editor after establishing EcRecE activity.
The abstract explicitly places editor development after EcRecE identification and ties it to functional domain engineering.
- 3.Validate dCas9-miniRecTE for DSB-free kilobase-scale knock-in in mammalian cellsvalidated editor
Confirm that the engineered editor supports large-fragment integration in human cells and primary mouse neurons.
Validation follows construct development to confirm the intended DSB-free knock-in function in relevant mammalian contexts.
Taxonomy & Function
Primary hierarchy
Mechanism Branch
Architecture: A composed arrangement of multiple parts that instantiates one or more mechanisms.
Techniques
No technique tags yet.
Target processes
recombinationValidation
Supporting Sources
Ranked Claims
Functional domain engineering of EcRecE with RecT and dCas9 produced dCas9-miniRecTE, a large-fragment integration editor that does not introduce double-strand breaks.
in combination with RecT and a catalytically inactive Cas9 (dCas9), applying functional domain engineering, we developed a dCas9-miniRecTE editor that enhances large-fragment integration without introducing double-strand breaks
dCas9-miniRecTE achieved about 20% kilobase-scale knock-in efficiency in human cells and primary mouse neurons.
in human cells and primary mouse neurons, achieving ∼20% kilobase-scale knock-in efficiency
Approval Evidence
we developed a dCas9-miniRecTE editor that enhances large-fragment integration without introducing double-strand breaks in human cells and primary mouse neurons, achieving ∼20% kilobase-scale knock-in efficiency.
Source:
Functional domain engineering of EcRecE with RecT and dCas9 produced dCas9-miniRecTE, a large-fragment integration editor that does not introduce double-strand breaks.
in combination with RecT and a catalytically inactive Cas9 (dCas9), applying functional domain engineering, we developed a dCas9-miniRecTE editor that enhances large-fragment integration without introducing double-strand breaks
Source:
dCas9-miniRecTE achieved about 20% kilobase-scale knock-in efficiency in human cells and primary mouse neurons.
in human cells and primary mouse neurons, achieving ∼20% kilobase-scale knock-in efficiency
Source:
Comparisons
No literature-backed comparison notes have been materialized for this record yet.
Ranked Citations
- 1.