Toolkit Items

Browse the toolkit beneath workflows. The mechanism branch runs mechanism -> architecture -> component, while the technique branch runs from high-level approaches down to concrete methods.

5 items matching 1 filter

Mechanism Branch

Layer 1

Mechanisms

Top-level concepts: biophysical action modes such as heterodimerization, photocleavage, or RNA binding.

Layer 2

Architectures

Arrangements that realize or deploy mechanisms, including switches, construct patterns, and delivery strategies.

Layer 3

Components

Low-level parts and sequence-defined elements used inside architectures, including protein domains and RNA elements.

Technique Branch

Layer 1

Approaches

High-level engineering practices such as computational design, directed evolution, sequence verification, and functional assay.

Layer 2

Methods

Concrete methods used to design, build, verify, or characterize engineered systems.

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biomolecular condensation

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Fus1 is a formin protein domain context in which an intrinsically disordered region is reported to drive condensation of the fusion focus. This condensation activity is essential for cell-cell fusion.

CFBacMamMusHumTxRep
Ev 28Rep 9Pr 71

rationally designed PopZ mutants

Construct Pattern

Rationally designed PopZ mutants are engineered variants of the bacterial condensate-forming protein PopZ in which sequence changes in a disordered domain are used to alter condensate behavior. Reported evidence indicates that these variants tune condensate function and that PopZ can be repurposed as a modular platform for synthetic condensates in human cells.

CFBacMamMusHumTxRep
Ev 28Rep 9Pr 71

synthetic PopZ condensates in human cells

Construct Pattern

Synthetic PopZ condensates in human cells are an engineered repurposing of the bacterial PopZ condensate system as a modular platform for forming biomolecular condensates in human cells. The reported design principle is that sequence variation in a disordered domain can tune condensate function.

CFBacMamMusHumTxRep
Ev 28Rep 9Pr 71
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