Source 1primary paper2007The Plant Journal
Toolkit/Affymetrix ATH1 microarray
Affymetrix ATH1 microarray
Taxonomy: Technique Branch / Method. Workflows sit above the mechanism and technique branches rather than replacing them.
Summary
The Affymetrix ATH1 microarray is a transcript expression assay for genome-scale expression profiling in Arabidopsis thaliana. In the cited AtGenExpress study, it was used to generate a comprehensive transcript dataset across abiotic stress conditions including UV-B light, drought, and cold.
Usefulness & Problems
Why this is useful
This assay is useful for measuring transcript abundance across the Arabidopsis thaliana genome in a standardized, high-throughput format. In the cited work, it enabled comparative analysis of transcriptional responses across multiple abiotic stress conditions using parallel protocols.
Problem solved
It addresses the need for comprehensive, genome-scale measurement of Arabidopsis transcriptional responses under environmental stress. In the cited study, it supported analysis of shared and condition-specific stress-response expression programs across UV-B, drought, and cold treatments.
Problem links
Need precise spatiotemporal control with light input
DerivedThe Affymetrix ATH1 microarray is a transcript expression assay used to generate comprehensive Arabidopsis thaliana genome-scale expression datasets. In the cited AtGenExpress study, it was used under standardized parallel protocols to profile transcriptional responses to multiple abiotic stresses including UV-B light, drought, and cold.
Need tighter control over gene expression timing or amplitude
DerivedThe Affymetrix ATH1 microarray is a transcript expression assay used to generate comprehensive Arabidopsis thaliana genome-scale expression datasets. In the cited AtGenExpress study, it was used under standardized parallel protocols to profile transcriptional responses to multiple abiotic stresses including UV-B light, drought, and cold.
Taxonomy & Function
Primary hierarchy
Technique Branch
Method: A concrete measurement method used to characterize an engineered system.
Mechanisms
nucleic acid hybridizationnucleic acid hybridizationnucleic acid hybridizationtranscript abundance measurementtranscript abundance measurementtranscript abundance measurementTechniques
Functional AssayTarget processes
transcriptionInput: Light
Implementation Constraints
cofactor dependency: cofactor requirement unknownencoding mode: genetically encodedimplementation constraint: context specific validationimplementation constraint: spectral hardware requirementoperating role: sensor
The available evidence specifies use of the Affymetrix ATH1 microarray for Arabidopsis thaliana transcript expression profiling. The cited application involved standardized parallel protocols across UV-B light, drought, and cold stress experiments, but the provided evidence does not include sample preparation, labeling, or normalization details.
The supplied evidence does not report analytical performance metrics such as sensitivity, dynamic range, reproducibility, or probe coverage. Validation is limited here to a single cited study in Arabidopsis thaliana under abiotic stress conditions.
Validation
Cell-freeBacteriaMammalianMouseHumanTherapeuticIndep. Replication
Supporting Sources
Ranked Claims
Systemic signals generated by stressed tissue may play a major role in coordinating and executing stress responses.
there are indications that systemic signals generated by the tissue exposed to stress play a major role in the coordination and execution of stress responses
Systemic signals generated by stressed tissue may play a major role in coordinating and executing stress responses.
there are indications that systemic signals generated by the tissue exposed to stress play a major role in the coordination and execution of stress responses
Systemic signals generated by stressed tissue may play a major role in coordinating and executing stress responses.
there are indications that systemic signals generated by the tissue exposed to stress play a major role in the coordination and execution of stress responses
Systemic signals generated by stressed tissue may play a major role in coordinating and executing stress responses.
there are indications that systemic signals generated by the tissue exposed to stress play a major role in the coordination and execution of stress responses
Systemic signals generated by stressed tissue may play a major role in coordinating and executing stress responses.
there are indications that systemic signals generated by the tissue exposed to stress play a major role in the coordination and execution of stress responses
Systemic signals generated by stressed tissue may play a major role in coordinating and executing stress responses.
there are indications that systemic signals generated by the tissue exposed to stress play a major role in the coordination and execution of stress responses
Systemic signals generated by stressed tissue may play a major role in coordinating and executing stress responses.
there are indications that systemic signals generated by the tissue exposed to stress play a major role in the coordination and execution of stress responses
Systemic signals generated by stressed tissue may play a major role in coordinating and executing stress responses.
there are indications that systemic signals generated by the tissue exposed to stress play a major role in the coordination and execution of stress responses
Systemic signals generated by stressed tissue may play a major role in coordinating and executing stress responses.
there are indications that systemic signals generated by the tissue exposed to stress play a major role in the coordination and execution of stress responses
Systemic signals generated by stressed tissue may play a major role in coordinating and executing stress responses.
there are indications that systemic signals generated by the tissue exposed to stress play a major role in the coordination and execution of stress responses
Systemic signals generated by stressed tissue may play a major role in coordinating and executing stress responses.
there are indications that systemic signals generated by the tissue exposed to stress play a major role in the coordination and execution of stress responses
Systemic signals generated by stressed tissue may play a major role in coordinating and executing stress responses.
there are indications that systemic signals generated by the tissue exposed to stress play a major role in the coordination and execution of stress responses
Systemic signals generated by stressed tissue may play a major role in coordinating and executing stress responses.
there are indications that systemic signals generated by the tissue exposed to stress play a major role in the coordination and execution of stress responses
Systemic signals generated by stressed tissue may play a major role in coordinating and executing stress responses.
there are indications that systemic signals generated by the tissue exposed to stress play a major role in the coordination and execution of stress responses
Systemic signals generated by stressed tissue may play a major role in coordinating and executing stress responses.
there are indications that systemic signals generated by the tissue exposed to stress play a major role in the coordination and execution of stress responses
Systemic signals generated by stressed tissue may play a major role in coordinating and executing stress responses.
there are indications that systemic signals generated by the tissue exposed to stress play a major role in the coordination and execution of stress responses
Systemic signals generated by stressed tissue may play a major role in coordinating and executing stress responses.
there are indications that systemic signals generated by the tissue exposed to stress play a major role in the coordination and execution of stress responses
The initial transcriptional stress reaction of Arabidopsis may include a core set of environmental stress response genes that function across multiple stress responses by adjusting energy balance.
Our results suggest that the initial transcriptional stress reaction of Arabidopsis might comprise a set of core environmental stress response genes which, by adjustment of the energy balance, could have a crucial function in various stress responses.
The initial transcriptional stress reaction of Arabidopsis may include a core set of environmental stress response genes that function across multiple stress responses by adjusting energy balance.
Our results suggest that the initial transcriptional stress reaction of Arabidopsis might comprise a set of core environmental stress response genes which, by adjustment of the energy balance, could have a crucial function in various stress responses.
The initial transcriptional stress reaction of Arabidopsis may include a core set of environmental stress response genes that function across multiple stress responses by adjusting energy balance.
Our results suggest that the initial transcriptional stress reaction of Arabidopsis might comprise a set of core environmental stress response genes which, by adjustment of the energy balance, could have a crucial function in various stress responses.
The initial transcriptional stress reaction of Arabidopsis may include a core set of environmental stress response genes that function across multiple stress responses by adjusting energy balance.
Our results suggest that the initial transcriptional stress reaction of Arabidopsis might comprise a set of core environmental stress response genes which, by adjustment of the energy balance, could have a crucial function in various stress responses.
The initial transcriptional stress reaction of Arabidopsis may include a core set of environmental stress response genes that function across multiple stress responses by adjusting energy balance.
Our results suggest that the initial transcriptional stress reaction of Arabidopsis might comprise a set of core environmental stress response genes which, by adjustment of the energy balance, could have a crucial function in various stress responses.
The initial transcriptional stress reaction of Arabidopsis may include a core set of environmental stress response genes that function across multiple stress responses by adjusting energy balance.
Our results suggest that the initial transcriptional stress reaction of Arabidopsis might comprise a set of core environmental stress response genes which, by adjustment of the energy balance, could have a crucial function in various stress responses.
The initial transcriptional stress reaction of Arabidopsis may include a core set of environmental stress response genes that function across multiple stress responses by adjusting energy balance.
Our results suggest that the initial transcriptional stress reaction of Arabidopsis might comprise a set of core environmental stress response genes which, by adjustment of the energy balance, could have a crucial function in various stress responses.
The initial transcriptional stress reaction of Arabidopsis may include a core set of environmental stress response genes that function across multiple stress responses by adjusting energy balance.
Our results suggest that the initial transcriptional stress reaction of Arabidopsis might comprise a set of core environmental stress response genes which, by adjustment of the energy balance, could have a crucial function in various stress responses.
The initial transcriptional stress reaction of Arabidopsis may include a core set of environmental stress response genes that function across multiple stress responses by adjusting energy balance.
Our results suggest that the initial transcriptional stress reaction of Arabidopsis might comprise a set of core environmental stress response genes which, by adjustment of the energy balance, could have a crucial function in various stress responses.
The initial transcriptional stress reaction of Arabidopsis may include a core set of environmental stress response genes that function across multiple stress responses by adjusting energy balance.
Our results suggest that the initial transcriptional stress reaction of Arabidopsis might comprise a set of core environmental stress response genes which, by adjustment of the energy balance, could have a crucial function in various stress responses.
The initial transcriptional stress reaction of Arabidopsis may include a core set of environmental stress response genes that function across multiple stress responses by adjusting energy balance.
Our results suggest that the initial transcriptional stress reaction of Arabidopsis might comprise a set of core environmental stress response genes which, by adjustment of the energy balance, could have a crucial function in various stress responses.
The initial transcriptional stress reaction of Arabidopsis may include a core set of environmental stress response genes that function across multiple stress responses by adjusting energy balance.
Our results suggest that the initial transcriptional stress reaction of Arabidopsis might comprise a set of core environmental stress response genes which, by adjustment of the energy balance, could have a crucial function in various stress responses.
The initial transcriptional stress reaction of Arabidopsis may include a core set of environmental stress response genes that function across multiple stress responses by adjusting energy balance.
Our results suggest that the initial transcriptional stress reaction of Arabidopsis might comprise a set of core environmental stress response genes which, by adjustment of the energy balance, could have a crucial function in various stress responses.
The initial transcriptional stress reaction of Arabidopsis may include a core set of environmental stress response genes that function across multiple stress responses by adjusting energy balance.
Our results suggest that the initial transcriptional stress reaction of Arabidopsis might comprise a set of core environmental stress response genes which, by adjustment of the energy balance, could have a crucial function in various stress responses.
The initial transcriptional stress reaction of Arabidopsis may include a core set of environmental stress response genes that function across multiple stress responses by adjusting energy balance.
Our results suggest that the initial transcriptional stress reaction of Arabidopsis might comprise a set of core environmental stress response genes which, by adjustment of the energy balance, could have a crucial function in various stress responses.
The initial transcriptional stress reaction of Arabidopsis may include a core set of environmental stress response genes that function across multiple stress responses by adjusting energy balance.
Our results suggest that the initial transcriptional stress reaction of Arabidopsis might comprise a set of core environmental stress response genes which, by adjustment of the energy balance, could have a crucial function in various stress responses.
The initial transcriptional stress reaction of Arabidopsis may include a core set of environmental stress response genes that function across multiple stress responses by adjusting energy balance.
Our results suggest that the initial transcriptional stress reaction of Arabidopsis might comprise a set of core environmental stress response genes which, by adjustment of the energy balance, could have a crucial function in various stress responses.
This study reports a comprehensive Arabidopsis thaliana genome transcript expression dataset generated with the Affymetrix ATH1 microarray under multiple abiotic stress conditions using standardized parallel protocols.
a comprehensive Arabidopsis thaliana genome transcript expression study was performed using the Affymetrix ATH1 microarray... Arabidopsis plants, of identical genotype grown under identical conditions, to different environmental stresses comprising heat, cold, drought, salt, high osmolarity, UV-B light and wounding. Furthermore, the harvesting of tissue and RNA isolation were performed in parallel at the same location using identical experimental protocols.
This study reports a comprehensive Arabidopsis thaliana genome transcript expression dataset generated with the Affymetrix ATH1 microarray under multiple abiotic stress conditions using standardized parallel protocols.
a comprehensive Arabidopsis thaliana genome transcript expression study was performed using the Affymetrix ATH1 microarray... Arabidopsis plants, of identical genotype grown under identical conditions, to different environmental stresses comprising heat, cold, drought, salt, high osmolarity, UV-B light and wounding. Furthermore, the harvesting of tissue and RNA isolation were performed in parallel at the same location using identical experimental protocols.
This study reports a comprehensive Arabidopsis thaliana genome transcript expression dataset generated with the Affymetrix ATH1 microarray under multiple abiotic stress conditions using standardized parallel protocols.
a comprehensive Arabidopsis thaliana genome transcript expression study was performed using the Affymetrix ATH1 microarray... Arabidopsis plants, of identical genotype grown under identical conditions, to different environmental stresses comprising heat, cold, drought, salt, high osmolarity, UV-B light and wounding. Furthermore, the harvesting of tissue and RNA isolation were performed in parallel at the same location using identical experimental protocols.
This study reports a comprehensive Arabidopsis thaliana genome transcript expression dataset generated with the Affymetrix ATH1 microarray under multiple abiotic stress conditions using standardized parallel protocols.
a comprehensive Arabidopsis thaliana genome transcript expression study was performed using the Affymetrix ATH1 microarray... Arabidopsis plants, of identical genotype grown under identical conditions, to different environmental stresses comprising heat, cold, drought, salt, high osmolarity, UV-B light and wounding. Furthermore, the harvesting of tissue and RNA isolation were performed in parallel at the same location using identical experimental protocols.
This study reports a comprehensive Arabidopsis thaliana genome transcript expression dataset generated with the Affymetrix ATH1 microarray under multiple abiotic stress conditions using standardized parallel protocols.
a comprehensive Arabidopsis thaliana genome transcript expression study was performed using the Affymetrix ATH1 microarray... Arabidopsis plants, of identical genotype grown under identical conditions, to different environmental stresses comprising heat, cold, drought, salt, high osmolarity, UV-B light and wounding. Furthermore, the harvesting of tissue and RNA isolation were performed in parallel at the same location using identical experimental protocols.
This study reports a comprehensive Arabidopsis thaliana genome transcript expression dataset generated with the Affymetrix ATH1 microarray under multiple abiotic stress conditions using standardized parallel protocols.
a comprehensive Arabidopsis thaliana genome transcript expression study was performed using the Affymetrix ATH1 microarray... Arabidopsis plants, of identical genotype grown under identical conditions, to different environmental stresses comprising heat, cold, drought, salt, high osmolarity, UV-B light and wounding. Furthermore, the harvesting of tissue and RNA isolation were performed in parallel at the same location using identical experimental protocols.
This study reports a comprehensive Arabidopsis thaliana genome transcript expression dataset generated with the Affymetrix ATH1 microarray under multiple abiotic stress conditions using standardized parallel protocols.
a comprehensive Arabidopsis thaliana genome transcript expression study was performed using the Affymetrix ATH1 microarray... Arabidopsis plants, of identical genotype grown under identical conditions, to different environmental stresses comprising heat, cold, drought, salt, high osmolarity, UV-B light and wounding. Furthermore, the harvesting of tissue and RNA isolation were performed in parallel at the same location using identical experimental protocols.
This study reports a comprehensive Arabidopsis thaliana genome transcript expression dataset generated with the Affymetrix ATH1 microarray under multiple abiotic stress conditions using standardized parallel protocols.
a comprehensive Arabidopsis thaliana genome transcript expression study was performed using the Affymetrix ATH1 microarray... Arabidopsis plants, of identical genotype grown under identical conditions, to different environmental stresses comprising heat, cold, drought, salt, high osmolarity, UV-B light and wounding. Furthermore, the harvesting of tissue and RNA isolation were performed in parallel at the same location using identical experimental protocols.
This study reports a comprehensive Arabidopsis thaliana genome transcript expression dataset generated with the Affymetrix ATH1 microarray under multiple abiotic stress conditions using standardized parallel protocols.
a comprehensive Arabidopsis thaliana genome transcript expression study was performed using the Affymetrix ATH1 microarray... Arabidopsis plants, of identical genotype grown under identical conditions, to different environmental stresses comprising heat, cold, drought, salt, high osmolarity, UV-B light and wounding. Furthermore, the harvesting of tissue and RNA isolation were performed in parallel at the same location using identical experimental protocols.
This study reports a comprehensive Arabidopsis thaliana genome transcript expression dataset generated with the Affymetrix ATH1 microarray under multiple abiotic stress conditions using standardized parallel protocols.
a comprehensive Arabidopsis thaliana genome transcript expression study was performed using the Affymetrix ATH1 microarray... Arabidopsis plants, of identical genotype grown under identical conditions, to different environmental stresses comprising heat, cold, drought, salt, high osmolarity, UV-B light and wounding. Furthermore, the harvesting of tissue and RNA isolation were performed in parallel at the same location using identical experimental protocols.
This study reports a comprehensive Arabidopsis thaliana genome transcript expression dataset generated with the Affymetrix ATH1 microarray under multiple abiotic stress conditions using standardized parallel protocols.
a comprehensive Arabidopsis thaliana genome transcript expression study was performed using the Affymetrix ATH1 microarray... Arabidopsis plants, of identical genotype grown under identical conditions, to different environmental stresses comprising heat, cold, drought, salt, high osmolarity, UV-B light and wounding. Furthermore, the harvesting of tissue and RNA isolation were performed in parallel at the same location using identical experimental protocols.
This study reports a comprehensive Arabidopsis thaliana genome transcript expression dataset generated with the Affymetrix ATH1 microarray under multiple abiotic stress conditions using standardized parallel protocols.
a comprehensive Arabidopsis thaliana genome transcript expression study was performed using the Affymetrix ATH1 microarray... Arabidopsis plants, of identical genotype grown under identical conditions, to different environmental stresses comprising heat, cold, drought, salt, high osmolarity, UV-B light and wounding. Furthermore, the harvesting of tissue and RNA isolation were performed in parallel at the same location using identical experimental protocols.
This study reports a comprehensive Arabidopsis thaliana genome transcript expression dataset generated with the Affymetrix ATH1 microarray under multiple abiotic stress conditions using standardized parallel protocols.
a comprehensive Arabidopsis thaliana genome transcript expression study was performed using the Affymetrix ATH1 microarray... Arabidopsis plants, of identical genotype grown under identical conditions, to different environmental stresses comprising heat, cold, drought, salt, high osmolarity, UV-B light and wounding. Furthermore, the harvesting of tissue and RNA isolation were performed in parallel at the same location using identical experimental protocols.
This study reports a comprehensive Arabidopsis thaliana genome transcript expression dataset generated with the Affymetrix ATH1 microarray under multiple abiotic stress conditions using standardized parallel protocols.
a comprehensive Arabidopsis thaliana genome transcript expression study was performed using the Affymetrix ATH1 microarray... Arabidopsis plants, of identical genotype grown under identical conditions, to different environmental stresses comprising heat, cold, drought, salt, high osmolarity, UV-B light and wounding. Furthermore, the harvesting of tissue and RNA isolation were performed in parallel at the same location using identical experimental protocols.
This study reports a comprehensive Arabidopsis thaliana genome transcript expression dataset generated with the Affymetrix ATH1 microarray under multiple abiotic stress conditions using standardized parallel protocols.
a comprehensive Arabidopsis thaliana genome transcript expression study was performed using the Affymetrix ATH1 microarray... Arabidopsis plants, of identical genotype grown under identical conditions, to different environmental stresses comprising heat, cold, drought, salt, high osmolarity, UV-B light and wounding. Furthermore, the harvesting of tissue and RNA isolation were performed in parallel at the same location using identical experimental protocols.
This study reports a comprehensive Arabidopsis thaliana genome transcript expression dataset generated with the Affymetrix ATH1 microarray under multiple abiotic stress conditions using standardized parallel protocols.
a comprehensive Arabidopsis thaliana genome transcript expression study was performed using the Affymetrix ATH1 microarray... Arabidopsis plants, of identical genotype grown under identical conditions, to different environmental stresses comprising heat, cold, drought, salt, high osmolarity, UV-B light and wounding. Furthermore, the harvesting of tissue and RNA isolation were performed in parallel at the same location using identical experimental protocols.
This study reports a comprehensive Arabidopsis thaliana genome transcript expression dataset generated with the Affymetrix ATH1 microarray under multiple abiotic stress conditions using standardized parallel protocols.
a comprehensive Arabidopsis thaliana genome transcript expression study was performed using the Affymetrix ATH1 microarray... Arabidopsis plants, of identical genotype grown under identical conditions, to different environmental stresses comprising heat, cold, drought, salt, high osmolarity, UV-B light and wounding. Furthermore, the harvesting of tissue and RNA isolation were performed in parallel at the same location using identical experimental protocols.
The reported dataset is presented as a prime reference resource for subsequent research into plant abiotic stress.
the information reported provides a prime reference point and source for the subsequent exploitation of this important resource for research into plant abiotic stress
The reported dataset is presented as a prime reference resource for subsequent research into plant abiotic stress.
the information reported provides a prime reference point and source for the subsequent exploitation of this important resource for research into plant abiotic stress
The reported dataset is presented as a prime reference resource for subsequent research into plant abiotic stress.
the information reported provides a prime reference point and source for the subsequent exploitation of this important resource for research into plant abiotic stress
The reported dataset is presented as a prime reference resource for subsequent research into plant abiotic stress.
the information reported provides a prime reference point and source for the subsequent exploitation of this important resource for research into plant abiotic stress
The reported dataset is presented as a prime reference resource for subsequent research into plant abiotic stress.
the information reported provides a prime reference point and source for the subsequent exploitation of this important resource for research into plant abiotic stress
The reported dataset is presented as a prime reference resource for subsequent research into plant abiotic stress.
the information reported provides a prime reference point and source for the subsequent exploitation of this important resource for research into plant abiotic stress
The reported dataset is presented as a prime reference resource for subsequent research into plant abiotic stress.
the information reported provides a prime reference point and source for the subsequent exploitation of this important resource for research into plant abiotic stress
The reported dataset is presented as a prime reference resource for subsequent research into plant abiotic stress.
the information reported provides a prime reference point and source for the subsequent exploitation of this important resource for research into plant abiotic stress
The reported dataset is presented as a prime reference resource for subsequent research into plant abiotic stress.
the information reported provides a prime reference point and source for the subsequent exploitation of this important resource for research into plant abiotic stress
The reported dataset is presented as a prime reference resource for subsequent research into plant abiotic stress.
the information reported provides a prime reference point and source for the subsequent exploitation of this important resource for research into plant abiotic stress
The reported dataset is presented as a prime reference resource for subsequent research into plant abiotic stress.
the information reported provides a prime reference point and source for the subsequent exploitation of this important resource for research into plant abiotic stress
The reported dataset is presented as a prime reference resource for subsequent research into plant abiotic stress.
the information reported provides a prime reference point and source for the subsequent exploitation of this important resource for research into plant abiotic stress
The reported dataset is presented as a prime reference resource for subsequent research into plant abiotic stress.
the information reported provides a prime reference point and source for the subsequent exploitation of this important resource for research into plant abiotic stress
The reported dataset is presented as a prime reference resource for subsequent research into plant abiotic stress.
the information reported provides a prime reference point and source for the subsequent exploitation of this important resource for research into plant abiotic stress
The reported dataset is presented as a prime reference resource for subsequent research into plant abiotic stress.
the information reported provides a prime reference point and source for the subsequent exploitation of this important resource for research into plant abiotic stress
The reported dataset is presented as a prime reference resource for subsequent research into plant abiotic stress.
the information reported provides a prime reference point and source for the subsequent exploitation of this important resource for research into plant abiotic stress
The reported dataset is presented as a prime reference resource for subsequent research into plant abiotic stress.
the information reported provides a prime reference point and source for the subsequent exploitation of this important resource for research into plant abiotic stress
Approval Evidence
1 source4 linked approval claimsfirst-pass slug affymetrix-ath1-microarray
a comprehensive Arabidopsis thaliana genome transcript expression study was performed using the Affymetrix ATH1 microarray
Source:
biological interpretationsupports
Systemic signals generated by stressed tissue may play a major role in coordinating and executing stress responses.
there are indications that systemic signals generated by the tissue exposed to stress play a major role in the coordination and execution of stress responses
Source:
biological interpretationsupports
The initial transcriptional stress reaction of Arabidopsis may include a core set of environmental stress response genes that function across multiple stress responses by adjusting energy balance.
Our results suggest that the initial transcriptional stress reaction of Arabidopsis might comprise a set of core environmental stress response genes which, by adjustment of the energy balance, could have a crucial function in various stress responses.
Source:
resource descriptionsupports
This study reports a comprehensive Arabidopsis thaliana genome transcript expression dataset generated with the Affymetrix ATH1 microarray under multiple abiotic stress conditions using standardized parallel protocols.
a comprehensive Arabidopsis thaliana genome transcript expression study was performed using the Affymetrix ATH1 microarray... Arabidopsis plants, of identical genotype grown under identical conditions, to different environmental stresses comprising heat, cold, drought, salt, high osmolarity, UV-B light and wounding. Furthermore, the harvesting of tissue and RNA isolation were performed in parallel at the same location using identical experimental protocols.
Source:
resource valuesupports
The reported dataset is presented as a prime reference resource for subsequent research into plant abiotic stress.
the information reported provides a prime reference point and source for the subsequent exploitation of this important resource for research into plant abiotic stress
Source:
Comparisons
Source-backed strengths
The cited evidence supports its use for comprehensive Arabidopsis thaliana genome transcript expression analysis. It was applied in a multi-condition stress dataset with standardized parallel protocols, which supports cross-condition comparability within that study.
Affymetrix ATH1 microarray and automated 96-well microplate illumination and measurement address a similar problem space because they share transcription.
Shared frame: same top-level item type; shared target processes: transcription; same primary input modality: light
Compared with Iris
Affymetrix ATH1 microarray and Iris address a similar problem space because they share transcription.
Shared frame: same top-level item type; shared target processes: transcription; same primary input modality: light
Relative tradeoffs: appears more independently replicated; looks easier to implement in practice.
Compared with open-source microplate reader
Affymetrix ATH1 microarray and open-source microplate reader address a similar problem space because they share transcription.
Shared frame: same top-level item type; shared target processes: transcription; same primary input modality: light
Ranked Citations
- 1.