Toolkit/fluorescence microscopy

fluorescence microscopy

Assay Method·Research·Since 2022

Taxonomy: Technique Branch / Method. Workflows sit above the mechanism and technique branches rather than replacing them.

Summary

Fluorescence microscopy is an imaging assay method used to detect and localize fluorescent signals in living biological specimens. In the supplied evidence, it is described for larval zebrafish as a means to achieve subcellular fluorescence localization and real-time monitoring of cell identity, fate, physiology, and organ pathophysiology.

Usefulness & Problems

Why this is useful

This method is useful for visualizing fluorescent reporters in vivo with subcellular spatial resolution. The cited review specifically positions larval zebrafish as well suited for fluorescence-based microscopy of organs including the pancreas and islets of Langerhans, enabling real-time observation of biological state and physiology.

Source:

In this protocol, an optogenetic expression system is used to achieve light-inducible gene expression in zebrafish embryos.

Problem solved

Fluorescence microscopy addresses the need to monitor where fluorescent signals occur within living tissues and how those signals change over time. In the provided context, it supports in vivo analysis of organ pathophysiology and fluorescent readouts of cell identity, fate, and physiology in larval zebrafish.

Source:

In this protocol, an optogenetic expression system is used to achieve light-inducible gene expression in zebrafish embryos.

Problem links

Need conditional recombination or state switching

Derived

Fluorescence microscopy is an imaging assay method used to modulate and localize fluorescence at subcellular resolution. In the supplied evidence, it is described in the context of living larval zebrafish for real-time monitoring of cell identity, fate, physiology, and organ pathophysiology.

Need inducible protein relocalization or recruitment

Derived

Fluorescence microscopy is an imaging assay method used to modulate and localize fluorescence at subcellular resolution. In the supplied evidence, it is described in the context of living larval zebrafish for real-time monitoring of cell identity, fate, physiology, and organ pathophysiology.

Need tighter control over protein production

Derived

Fluorescence microscopy is an imaging assay method used to modulate and localize fluorescence at subcellular resolution. In the supplied evidence, it is described in the context of living larval zebrafish for real-time monitoring of cell identity, fate, physiology, and organ pathophysiology.

Taxonomy & Function

Primary hierarchy

Technique Branch

Method: A concrete measurement method used to characterize an engineered system.

Target processes

localizationrecombinationtranslation

Implementation Constraints

cofactor dependency: cofactor requirement unknownencoding mode: genetically encodedimplementation constraint: context specific validationmodality: fluorescence imagingoperating role: sensorrelation to afm: complementary methodsupports live imaging: True

The documented implementation context is in vivo imaging in larval zebrafish, including pancreatic and islet studies. The evidence indicates use with fluorescent probes, but it does not provide construct design details, excitation or emission wavelengths, instrumentation parameters, or sample preparation protocols.

The evidence provided is high level and does not specify microscope modality, fluorophores, quantitative performance, imaging depth, temporal resolution, or sensitivity. It also does not directly validate translation or recombination readouts beyond the broader statement that fluorescence can be modulated and localized.

Validation

Cell-freeBacteriaMammalianMouseHumanTherapeuticIndep. Replication

Supporting Sources

Ranked Claims

Claim 1review scope summarysupports2022Source 3needs review

Larval zebrafish enable in vivo microscopy for studying organ pathophysiology, including the pancreas and islets of Langerhans.

zebrafish larvae allow studying pathophysiology of many organs using in vivo microscopy. Here, we review the potential of the larval zebrafish pancreas in the context of islets of Langerhans and Type 1 diabetes.
Claim 2review scope summarysupports2022Source 3needs review

Larval zebrafish enable in vivo microscopy for studying organ pathophysiology, including the pancreas and islets of Langerhans.

zebrafish larvae allow studying pathophysiology of many organs using in vivo microscopy. Here, we review the potential of the larval zebrafish pancreas in the context of islets of Langerhans and Type 1 diabetes.
Claim 3review scope summarysupports2022Source 3needs review

Larval zebrafish enable in vivo microscopy for studying organ pathophysiology, including the pancreas and islets of Langerhans.

zebrafish larvae allow studying pathophysiology of many organs using in vivo microscopy. Here, we review the potential of the larval zebrafish pancreas in the context of islets of Langerhans and Type 1 diabetes.
Claim 4review scope summarysupports2022Source 3needs review

Larval zebrafish enable in vivo microscopy for studying organ pathophysiology, including the pancreas and islets of Langerhans.

zebrafish larvae allow studying pathophysiology of many organs using in vivo microscopy. Here, we review the potential of the larval zebrafish pancreas in the context of islets of Langerhans and Type 1 diabetes.
Claim 5review scope summarysupports2022Source 3needs review

Larval zebrafish enable in vivo microscopy for studying organ pathophysiology, including the pancreas and islets of Langerhans.

zebrafish larvae allow studying pathophysiology of many organs using in vivo microscopy. Here, we review the potential of the larval zebrafish pancreas in the context of islets of Langerhans and Type 1 diabetes.
Claim 6review scope summarysupports2022Source 3needs review

Larval zebrafish enable in vivo microscopy for studying organ pathophysiology, including the pancreas and islets of Langerhans.

zebrafish larvae allow studying pathophysiology of many organs using in vivo microscopy. Here, we review the potential of the larval zebrafish pancreas in the context of islets of Langerhans and Type 1 diabetes.
Claim 7review scope summarysupports2022Source 3needs review

Larval zebrafish enable in vivo microscopy for studying organ pathophysiology, including the pancreas and islets of Langerhans.

zebrafish larvae allow studying pathophysiology of many organs using in vivo microscopy. Here, we review the potential of the larval zebrafish pancreas in the context of islets of Langerhans and Type 1 diabetes.
Claim 8review scope summarysupports2022Source 3needs review

Larval zebrafish enable in vivo microscopy for studying organ pathophysiology, including the pancreas and islets of Langerhans.

zebrafish larvae allow studying pathophysiology of many organs using in vivo microscopy. Here, we review the potential of the larval zebrafish pancreas in the context of islets of Langerhans and Type 1 diabetes.
Claim 9review scope summarysupports2022Source 3needs review

Larval zebrafish enable in vivo microscopy for studying organ pathophysiology, including the pancreas and islets of Langerhans.

zebrafish larvae allow studying pathophysiology of many organs using in vivo microscopy. Here, we review the potential of the larval zebrafish pancreas in the context of islets of Langerhans and Type 1 diabetes.
Claim 10review scope summarysupports2022Source 3needs review

Larval zebrafish enable in vivo microscopy for studying organ pathophysiology, including the pancreas and islets of Langerhans.

zebrafish larvae allow studying pathophysiology of many organs using in vivo microscopy. Here, we review the potential of the larval zebrafish pancreas in the context of islets of Langerhans and Type 1 diabetes.
Claim 11review scope summarysupports2022Source 3needs review

Larval zebrafish enable in vivo microscopy for studying organ pathophysiology, including the pancreas and islets of Langerhans.

zebrafish larvae allow studying pathophysiology of many organs using in vivo microscopy. Here, we review the potential of the larval zebrafish pancreas in the context of islets of Langerhans and Type 1 diabetes.
Claim 12review scope summarysupports2022Source 3needs review

Larval zebrafish enable in vivo microscopy for studying organ pathophysiology, including the pancreas and islets of Langerhans.

zebrafish larvae allow studying pathophysiology of many organs using in vivo microscopy. Here, we review the potential of the larval zebrafish pancreas in the context of islets of Langerhans and Type 1 diabetes.
Claim 13review scope summarysupports2022Source 3needs review

Larval zebrafish enable in vivo microscopy for studying organ pathophysiology, including the pancreas and islets of Langerhans.

zebrafish larvae allow studying pathophysiology of many organs using in vivo microscopy. Here, we review the potential of the larval zebrafish pancreas in the context of islets of Langerhans and Type 1 diabetes.
Claim 14review scope summarysupports2022Source 3needs review

Larval zebrafish enable in vivo microscopy for studying organ pathophysiology, including the pancreas and islets of Langerhans.

zebrafish larvae allow studying pathophysiology of many organs using in vivo microscopy. Here, we review the potential of the larval zebrafish pancreas in the context of islets of Langerhans and Type 1 diabetes.
Claim 15review scope summarysupports2022Source 3needs review

Larval zebrafish enable in vivo microscopy for studying organ pathophysiology, including the pancreas and islets of Langerhans.

zebrafish larvae allow studying pathophysiology of many organs using in vivo microscopy. Here, we review the potential of the larval zebrafish pancreas in the context of islets of Langerhans and Type 1 diabetes.
Claim 16review scope summarysupports2022Source 3needs review

Larval zebrafish enable in vivo microscopy for studying organ pathophysiology, including the pancreas and islets of Langerhans.

zebrafish larvae allow studying pathophysiology of many organs using in vivo microscopy. Here, we review the potential of the larval zebrafish pancreas in the context of islets of Langerhans and Type 1 diabetes.
Claim 17review scope summarysupports2022Source 3needs review

Larval zebrafish enable in vivo microscopy for studying organ pathophysiology, including the pancreas and islets of Langerhans.

zebrafish larvae allow studying pathophysiology of many organs using in vivo microscopy. Here, we review the potential of the larval zebrafish pancreas in the context of islets of Langerhans and Type 1 diabetes.
Claim 18review scope summarysupports2022Source 3needs review

Larval zebrafish enable in vivo microscopy for studying organ pathophysiology, including the pancreas and islets of Langerhans.

zebrafish larvae allow studying pathophysiology of many organs using in vivo microscopy. Here, we review the potential of the larval zebrafish pancreas in the context of islets of Langerhans and Type 1 diabetes.
Claim 19review scope summarysupports2022Source 3needs review

Larval zebrafish enable in vivo microscopy for studying organ pathophysiology, including the pancreas and islets of Langerhans.

zebrafish larvae allow studying pathophysiology of many organs using in vivo microscopy. Here, we review the potential of the larval zebrafish pancreas in the context of islets of Langerhans and Type 1 diabetes.
Claim 20review scope summarysupports2022Source 3needs review

Larval zebrafish enable in vivo microscopy for studying organ pathophysiology, including the pancreas and islets of Langerhans.

zebrafish larvae allow studying pathophysiology of many organs using in vivo microscopy. Here, we review the potential of the larval zebrafish pancreas in the context of islets of Langerhans and Type 1 diabetes.
Claim 21review scope summarysupports2022Source 3needs review

Larval zebrafish enable in vivo microscopy for studying organ pathophysiology, including the pancreas and islets of Langerhans.

zebrafish larvae allow studying pathophysiology of many organs using in vivo microscopy. Here, we review the potential of the larval zebrafish pancreas in the context of islets of Langerhans and Type 1 diabetes.
Claim 22review scope summarysupports2022Source 3needs review

Larval zebrafish enable in vivo microscopy for studying organ pathophysiology, including the pancreas and islets of Langerhans.

zebrafish larvae allow studying pathophysiology of many organs using in vivo microscopy. Here, we review the potential of the larval zebrafish pancreas in the context of islets of Langerhans and Type 1 diabetes.
Claim 23review scope summarysupports2022Source 3needs review

Larval zebrafish enable in vivo microscopy for studying organ pathophysiology, including the pancreas and islets of Langerhans.

zebrafish larvae allow studying pathophysiology of many organs using in vivo microscopy. Here, we review the potential of the larval zebrafish pancreas in the context of islets of Langerhans and Type 1 diabetes.
Claim 24review scope summarysupports2022Source 3needs review

Larval zebrafish enable in vivo microscopy for studying organ pathophysiology, including the pancreas and islets of Langerhans.

zebrafish larvae allow studying pathophysiology of many organs using in vivo microscopy. Here, we review the potential of the larval zebrafish pancreas in the context of islets of Langerhans and Type 1 diabetes.
Claim 25review scope summarysupports2022Source 3needs review

Larval zebrafish enable in vivo microscopy for studying organ pathophysiology, including the pancreas and islets of Langerhans.

zebrafish larvae allow studying pathophysiology of many organs using in vivo microscopy. Here, we review the potential of the larval zebrafish pancreas in the context of islets of Langerhans and Type 1 diabetes.
Claim 26review scope summarysupports2022Source 3needs review

Larval zebrafish enable in vivo microscopy for studying organ pathophysiology, including the pancreas and islets of Langerhans.

zebrafish larvae allow studying pathophysiology of many organs using in vivo microscopy. Here, we review the potential of the larval zebrafish pancreas in the context of islets of Langerhans and Type 1 diabetes.
Claim 27review scope summarysupports2022Source 3needs review

Larval zebrafish enable in vivo microscopy for studying organ pathophysiology, including the pancreas and islets of Langerhans.

zebrafish larvae allow studying pathophysiology of many organs using in vivo microscopy. Here, we review the potential of the larval zebrafish pancreas in the context of islets of Langerhans and Type 1 diabetes.
Claim 28toolkit fit summarysupports2022Source 3needs review

The review states that larval zebrafish are well matched to fluorescent probes for real-time monitoring of cell identity, fate, and physiology.

We highlight the match of zebrafish larvae with the expanding toolbox of fluorescent probes that monitor cell identity, fate and/or physiology in real time.
Claim 29toolkit fit summarysupports2022Source 3needs review

The review states that larval zebrafish are well matched to fluorescent probes for real-time monitoring of cell identity, fate, and physiology.

We highlight the match of zebrafish larvae with the expanding toolbox of fluorescent probes that monitor cell identity, fate and/or physiology in real time.
Claim 30toolkit fit summarysupports2022Source 3needs review

The review states that larval zebrafish are well matched to fluorescent probes for real-time monitoring of cell identity, fate, and physiology.

We highlight the match of zebrafish larvae with the expanding toolbox of fluorescent probes that monitor cell identity, fate and/or physiology in real time.
Claim 31toolkit fit summarysupports2022Source 3needs review

The review states that larval zebrafish are well matched to fluorescent probes for real-time monitoring of cell identity, fate, and physiology.

We highlight the match of zebrafish larvae with the expanding toolbox of fluorescent probes that monitor cell identity, fate and/or physiology in real time.
Claim 32toolkit fit summarysupports2022Source 3needs review

The review states that larval zebrafish are well matched to fluorescent probes for real-time monitoring of cell identity, fate, and physiology.

We highlight the match of zebrafish larvae with the expanding toolbox of fluorescent probes that monitor cell identity, fate and/or physiology in real time.
Claim 33toolkit fit summarysupports2022Source 3needs review

The review states that larval zebrafish are well matched to fluorescent probes for real-time monitoring of cell identity, fate, and physiology.

We highlight the match of zebrafish larvae with the expanding toolbox of fluorescent probes that monitor cell identity, fate and/or physiology in real time.
Claim 34toolkit fit summarysupports2022Source 3needs review

The review states that larval zebrafish are well matched to fluorescent probes for real-time monitoring of cell identity, fate, and physiology.

We highlight the match of zebrafish larvae with the expanding toolbox of fluorescent probes that monitor cell identity, fate and/or physiology in real time.
Claim 35toolkit fit summarysupports2022Source 3needs review

The review states that larval zebrafish are well matched to fluorescent probes for real-time monitoring of cell identity, fate, and physiology.

We highlight the match of zebrafish larvae with the expanding toolbox of fluorescent probes that monitor cell identity, fate and/or physiology in real time.
Claim 36toolkit fit summarysupports2022Source 3needs review

The review states that larval zebrafish are well matched to fluorescent probes for real-time monitoring of cell identity, fate, and physiology.

We highlight the match of zebrafish larvae with the expanding toolbox of fluorescent probes that monitor cell identity, fate and/or physiology in real time.
Claim 37toolkit fit summarysupports2022Source 3needs review

The review states that larval zebrafish are well matched to fluorescent probes for real-time monitoring of cell identity, fate, and physiology.

We highlight the match of zebrafish larvae with the expanding toolbox of fluorescent probes that monitor cell identity, fate and/or physiology in real time.
Claim 38toolkit fit summarysupports2022Source 3needs review

The review states that larval zebrafish are well matched to fluorescent probes for real-time monitoring of cell identity, fate, and physiology.

We highlight the match of zebrafish larvae with the expanding toolbox of fluorescent probes that monitor cell identity, fate and/or physiology in real time.
Claim 39toolkit fit summarysupports2022Source 3needs review

The review states that larval zebrafish are well matched to fluorescent probes for real-time monitoring of cell identity, fate, and physiology.

We highlight the match of zebrafish larvae with the expanding toolbox of fluorescent probes that monitor cell identity, fate and/or physiology in real time.
Claim 40toolkit fit summarysupports2022Source 3needs review

The review states that larval zebrafish are well matched to fluorescent probes for real-time monitoring of cell identity, fate, and physiology.

We highlight the match of zebrafish larvae with the expanding toolbox of fluorescent probes that monitor cell identity, fate and/or physiology in real time.
Claim 41toolkit fit summarysupports2022Source 3needs review

The review states that larval zebrafish are well matched to fluorescent probes for real-time monitoring of cell identity, fate, and physiology.

We highlight the match of zebrafish larvae with the expanding toolbox of fluorescent probes that monitor cell identity, fate and/or physiology in real time.
Claim 42toolkit fit summarysupports2022Source 3needs review

The review states that larval zebrafish are well matched to fluorescent probes for real-time monitoring of cell identity, fate, and physiology.

We highlight the match of zebrafish larvae with the expanding toolbox of fluorescent probes that monitor cell identity, fate and/or physiology in real time.
Claim 43toolkit fit summarysupports2022Source 3needs review

The review states that larval zebrafish are well matched to fluorescent probes for real-time monitoring of cell identity, fate, and physiology.

We highlight the match of zebrafish larvae with the expanding toolbox of fluorescent probes that monitor cell identity, fate and/or physiology in real time.
Claim 44toolkit fit summarysupports2022Source 3needs review

The review states that larval zebrafish are well matched to fluorescent probes for real-time monitoring of cell identity, fate, and physiology.

We highlight the match of zebrafish larvae with the expanding toolbox of fluorescent probes that monitor cell identity, fate and/or physiology in real time.
Claim 45toolkit fit summarysupports2022Source 3needs review

The review states that larval zebrafish are well matched to fluorescent probes for real-time monitoring of cell identity, fate, and physiology.

We highlight the match of zebrafish larvae with the expanding toolbox of fluorescent probes that monitor cell identity, fate and/or physiology in real time.
Claim 46toolkit fit summarysupports2022Source 3needs review

The review states that larval zebrafish are well matched to fluorescent probes for real-time monitoring of cell identity, fate, and physiology.

We highlight the match of zebrafish larvae with the expanding toolbox of fluorescent probes that monitor cell identity, fate and/or physiology in real time.
Claim 47toolkit fit summarysupports2022Source 3needs review

The review states that larval zebrafish are well matched to fluorescent probes for real-time monitoring of cell identity, fate, and physiology.

We highlight the match of zebrafish larvae with the expanding toolbox of fluorescent probes that monitor cell identity, fate and/or physiology in real time.
Claim 48translational positioningsupports2022Source 3needs review

The review positions living larval zebrafish as a powerful translational research tool and forecasts replacement of many cell line-based studies for understanding organ pathophysiology in whole organisms.

These developments make the zebrafish larvae an extremely powerful research tool for translational research. We foresee that living larval zebrafish models will replace many cell line-based studies in understanding the contribution of molecules, organelles and cells to organ pathophysiology in whole organisms.
Claim 49translational positioningsupports2022Source 3needs review

The review positions living larval zebrafish as a powerful translational research tool and forecasts replacement of many cell line-based studies for understanding organ pathophysiology in whole organisms.

These developments make the zebrafish larvae an extremely powerful research tool for translational research. We foresee that living larval zebrafish models will replace many cell line-based studies in understanding the contribution of molecules, organelles and cells to organ pathophysiology in whole organisms.
Claim 50translational positioningsupports2022Source 3needs review

The review positions living larval zebrafish as a powerful translational research tool and forecasts replacement of many cell line-based studies for understanding organ pathophysiology in whole organisms.

These developments make the zebrafish larvae an extremely powerful research tool for translational research. We foresee that living larval zebrafish models will replace many cell line-based studies in understanding the contribution of molecules, organelles and cells to organ pathophysiology in whole organisms.
Claim 51translational positioningsupports2022Source 3needs review

The review positions living larval zebrafish as a powerful translational research tool and forecasts replacement of many cell line-based studies for understanding organ pathophysiology in whole organisms.

These developments make the zebrafish larvae an extremely powerful research tool for translational research. We foresee that living larval zebrafish models will replace many cell line-based studies in understanding the contribution of molecules, organelles and cells to organ pathophysiology in whole organisms.
Claim 52translational positioningsupports2022Source 3needs review

The review positions living larval zebrafish as a powerful translational research tool and forecasts replacement of many cell line-based studies for understanding organ pathophysiology in whole organisms.

These developments make the zebrafish larvae an extremely powerful research tool for translational research. We foresee that living larval zebrafish models will replace many cell line-based studies in understanding the contribution of molecules, organelles and cells to organ pathophysiology in whole organisms.
Claim 53translational positioningsupports2022Source 3needs review

The review positions living larval zebrafish as a powerful translational research tool and forecasts replacement of many cell line-based studies for understanding organ pathophysiology in whole organisms.

These developments make the zebrafish larvae an extremely powerful research tool for translational research. We foresee that living larval zebrafish models will replace many cell line-based studies in understanding the contribution of molecules, organelles and cells to organ pathophysiology in whole organisms.
Claim 54translational positioningsupports2022Source 3needs review

The review positions living larval zebrafish as a powerful translational research tool and forecasts replacement of many cell line-based studies for understanding organ pathophysiology in whole organisms.

These developments make the zebrafish larvae an extremely powerful research tool for translational research. We foresee that living larval zebrafish models will replace many cell line-based studies in understanding the contribution of molecules, organelles and cells to organ pathophysiology in whole organisms.
Claim 55translational positioningsupports2022Source 3needs review

The review positions living larval zebrafish as a powerful translational research tool and forecasts replacement of many cell line-based studies for understanding organ pathophysiology in whole organisms.

These developments make the zebrafish larvae an extremely powerful research tool for translational research. We foresee that living larval zebrafish models will replace many cell line-based studies in understanding the contribution of molecules, organelles and cells to organ pathophysiology in whole organisms.
Claim 56translational positioningsupports2022Source 3needs review

The review positions living larval zebrafish as a powerful translational research tool and forecasts replacement of many cell line-based studies for understanding organ pathophysiology in whole organisms.

These developments make the zebrafish larvae an extremely powerful research tool for translational research. We foresee that living larval zebrafish models will replace many cell line-based studies in understanding the contribution of molecules, organelles and cells to organ pathophysiology in whole organisms.
Claim 57translational positioningsupports2022Source 3needs review

The review positions living larval zebrafish as a powerful translational research tool and forecasts replacement of many cell line-based studies for understanding organ pathophysiology in whole organisms.

These developments make the zebrafish larvae an extremely powerful research tool for translational research. We foresee that living larval zebrafish models will replace many cell line-based studies in understanding the contribution of molecules, organelles and cells to organ pathophysiology in whole organisms.
Claim 58translational positioningsupports2022Source 3needs review

The review positions living larval zebrafish as a powerful translational research tool and forecasts replacement of many cell line-based studies for understanding organ pathophysiology in whole organisms.

These developments make the zebrafish larvae an extremely powerful research tool for translational research. We foresee that living larval zebrafish models will replace many cell line-based studies in understanding the contribution of molecules, organelles and cells to organ pathophysiology in whole organisms.
Claim 59translational positioningsupports2022Source 3needs review

The review positions living larval zebrafish as a powerful translational research tool and forecasts replacement of many cell line-based studies for understanding organ pathophysiology in whole organisms.

These developments make the zebrafish larvae an extremely powerful research tool for translational research. We foresee that living larval zebrafish models will replace many cell line-based studies in understanding the contribution of molecules, organelles and cells to organ pathophysiology in whole organisms.
Claim 60translational positioningsupports2022Source 3needs review

The review positions living larval zebrafish as a powerful translational research tool and forecasts replacement of many cell line-based studies for understanding organ pathophysiology in whole organisms.

These developments make the zebrafish larvae an extremely powerful research tool for translational research. We foresee that living larval zebrafish models will replace many cell line-based studies in understanding the contribution of molecules, organelles and cells to organ pathophysiology in whole organisms.
Claim 61translational positioningsupports2022Source 3needs review

The review positions living larval zebrafish as a powerful translational research tool and forecasts replacement of many cell line-based studies for understanding organ pathophysiology in whole organisms.

These developments make the zebrafish larvae an extremely powerful research tool for translational research. We foresee that living larval zebrafish models will replace many cell line-based studies in understanding the contribution of molecules, organelles and cells to organ pathophysiology in whole organisms.
Claim 62translational positioningsupports2022Source 3needs review

The review positions living larval zebrafish as a powerful translational research tool and forecasts replacement of many cell line-based studies for understanding organ pathophysiology in whole organisms.

These developments make the zebrafish larvae an extremely powerful research tool for translational research. We foresee that living larval zebrafish models will replace many cell line-based studies in understanding the contribution of molecules, organelles and cells to organ pathophysiology in whole organisms.
Claim 63translational positioningsupports2022Source 3needs review

The review positions living larval zebrafish as a powerful translational research tool and forecasts replacement of many cell line-based studies for understanding organ pathophysiology in whole organisms.

These developments make the zebrafish larvae an extremely powerful research tool for translational research. We foresee that living larval zebrafish models will replace many cell line-based studies in understanding the contribution of molecules, organelles and cells to organ pathophysiology in whole organisms.
Claim 64translational positioningsupports2022Source 3needs review

The review positions living larval zebrafish as a powerful translational research tool and forecasts replacement of many cell line-based studies for understanding organ pathophysiology in whole organisms.

These developments make the zebrafish larvae an extremely powerful research tool for translational research. We foresee that living larval zebrafish models will replace many cell line-based studies in understanding the contribution of molecules, organelles and cells to organ pathophysiology in whole organisms.
Claim 65translational positioningsupports2022Source 3needs review

The review positions living larval zebrafish as a powerful translational research tool and forecasts replacement of many cell line-based studies for understanding organ pathophysiology in whole organisms.

These developments make the zebrafish larvae an extremely powerful research tool for translational research. We foresee that living larval zebrafish models will replace many cell line-based studies in understanding the contribution of molecules, organelles and cells to organ pathophysiology in whole organisms.
Claim 66translational positioningsupports2022Source 3needs review

The review positions living larval zebrafish as a powerful translational research tool and forecasts replacement of many cell line-based studies for understanding organ pathophysiology in whole organisms.

These developments make the zebrafish larvae an extremely powerful research tool for translational research. We foresee that living larval zebrafish models will replace many cell line-based studies in understanding the contribution of molecules, organelles and cells to organ pathophysiology in whole organisms.
Claim 67translational positioningsupports2022Source 3needs review

The review positions living larval zebrafish as a powerful translational research tool and forecasts replacement of many cell line-based studies for understanding organ pathophysiology in whole organisms.

These developments make the zebrafish larvae an extremely powerful research tool for translational research. We foresee that living larval zebrafish models will replace many cell line-based studies in understanding the contribution of molecules, organelles and cells to organ pathophysiology in whole organisms.
Claim 68translational positioningsupports2022Source 3needs review

The review positions living larval zebrafish as a powerful translational research tool and forecasts replacement of many cell line-based studies for understanding organ pathophysiology in whole organisms.

These developments make the zebrafish larvae an extremely powerful research tool for translational research. We foresee that living larval zebrafish models will replace many cell line-based studies in understanding the contribution of molecules, organelles and cells to organ pathophysiology in whole organisms.
Claim 69translational positioningsupports2022Source 3needs review

The review positions living larval zebrafish as a powerful translational research tool and forecasts replacement of many cell line-based studies for understanding organ pathophysiology in whole organisms.

These developments make the zebrafish larvae an extremely powerful research tool for translational research. We foresee that living larval zebrafish models will replace many cell line-based studies in understanding the contribution of molecules, organelles and cells to organ pathophysiology in whole organisms.
Claim 70translational positioningsupports2022Source 3needs review

The review positions living larval zebrafish as a powerful translational research tool and forecasts replacement of many cell line-based studies for understanding organ pathophysiology in whole organisms.

These developments make the zebrafish larvae an extremely powerful research tool for translational research. We foresee that living larval zebrafish models will replace many cell line-based studies in understanding the contribution of molecules, organelles and cells to organ pathophysiology in whole organisms.
Claim 71translational positioningsupports2022Source 3needs review

The review positions living larval zebrafish as a powerful translational research tool and forecasts replacement of many cell line-based studies for understanding organ pathophysiology in whole organisms.

These developments make the zebrafish larvae an extremely powerful research tool for translational research. We foresee that living larval zebrafish models will replace many cell line-based studies in understanding the contribution of molecules, organelles and cells to organ pathophysiology in whole organisms.
Claim 72translational positioningsupports2022Source 3needs review

The review positions living larval zebrafish as a powerful translational research tool and forecasts replacement of many cell line-based studies for understanding organ pathophysiology in whole organisms.

These developments make the zebrafish larvae an extremely powerful research tool for translational research. We foresee that living larval zebrafish models will replace many cell line-based studies in understanding the contribution of molecules, organelles and cells to organ pathophysiology in whole organisms.
Claim 73translational positioningsupports2022Source 3needs review

The review positions living larval zebrafish as a powerful translational research tool and forecasts replacement of many cell line-based studies for understanding organ pathophysiology in whole organisms.

These developments make the zebrafish larvae an extremely powerful research tool for translational research. We foresee that living larval zebrafish models will replace many cell line-based studies in understanding the contribution of molecules, organelles and cells to organ pathophysiology in whole organisms.
Claim 74translational positioningsupports2022Source 3needs review

The review positions living larval zebrafish as a powerful translational research tool and forecasts replacement of many cell line-based studies for understanding organ pathophysiology in whole organisms.

These developments make the zebrafish larvae an extremely powerful research tool for translational research. We foresee that living larval zebrafish models will replace many cell line-based studies in understanding the contribution of molecules, organelles and cells to organ pathophysiology in whole organisms.
Claim 75applicationsupports2021Source 2needs review

The TAEL/C120 system is used to achieve light-inducible gene expression in zebrafish embryos.

In this protocol, an optogenetic expression system is used to achieve light-inducible gene expression in zebrafish embryos.
Claim 76applicationsupports2021Source 2needs review

The TAEL/C120 system is used to achieve light-inducible gene expression in zebrafish embryos.

In this protocol, an optogenetic expression system is used to achieve light-inducible gene expression in zebrafish embryos.
Claim 77applicationsupports2021Source 2needs review

The TAEL/C120 system is used to achieve light-inducible gene expression in zebrafish embryos.

In this protocol, an optogenetic expression system is used to achieve light-inducible gene expression in zebrafish embryos.
Claim 78applicationsupports2021Source 2needs review

The TAEL/C120 system is used to achieve light-inducible gene expression in zebrafish embryos.

In this protocol, an optogenetic expression system is used to achieve light-inducible gene expression in zebrafish embryos.
Claim 79applicationsupports2021Source 2needs review

The TAEL/C120 system is used to achieve light-inducible gene expression in zebrafish embryos.

In this protocol, an optogenetic expression system is used to achieve light-inducible gene expression in zebrafish embryos.
Claim 80mechanismsupports2021Source 2needs review

Blue light causes TAEL to dimerize, bind C120, and activate transcription.

When illuminated with blue light, TAEL dimerizes, binds to its cognate regulatory element called C120, and activates transcription.
Claim 81mechanismsupports2021Source 2needs review

Blue light causes TAEL to dimerize, bind C120, and activate transcription.

When illuminated with blue light, TAEL dimerizes, binds to its cognate regulatory element called C120, and activates transcription.
Claim 82mechanismsupports2021Source 2needs review

Blue light causes TAEL to dimerize, bind C120, and activate transcription.

When illuminated with blue light, TAEL dimerizes, binds to its cognate regulatory element called C120, and activates transcription.
Claim 83mechanismsupports2021Source 2needs review

Blue light causes TAEL to dimerize, bind C120, and activate transcription.

When illuminated with blue light, TAEL dimerizes, binds to its cognate regulatory element called C120, and activates transcription.
Claim 84mechanismsupports2021Source 2needs review

Blue light causes TAEL to dimerize, bind C120, and activate transcription.

When illuminated with blue light, TAEL dimerizes, binds to its cognate regulatory element called C120, and activates transcription.
Claim 85mechanismsupports2021Source 2needs review

Blue light causes TAEL to dimerize, bind C120, and activate transcription.

When illuminated with blue light, TAEL dimerizes, binds to its cognate regulatory element called C120, and activates transcription.
Claim 86mechanismsupports2021Source 2needs review

Blue light causes TAEL to dimerize, bind C120, and activate transcription.

When illuminated with blue light, TAEL dimerizes, binds to its cognate regulatory element called C120, and activates transcription.
Claim 87mechanismsupports2021Source 2needs review

Blue light causes TAEL to dimerize, bind C120, and activate transcription.

When illuminated with blue light, TAEL dimerizes, binds to its cognate regulatory element called C120, and activates transcription.
Claim 88mechanismsupports2021Source 2needs review

Blue light causes TAEL to dimerize, bind C120, and activate transcription.

When illuminated with blue light, TAEL dimerizes, binds to its cognate regulatory element called C120, and activates transcription.
Claim 89mechanismsupports2021Source 2needs review

Blue light causes TAEL to dimerize, bind C120, and activate transcription.

When illuminated with blue light, TAEL dimerizes, binds to its cognate regulatory element called C120, and activates transcription.
Claim 90performancesupports2021Source 2needs review

Blue-light illumination induces GFP expression detectable after 30 minutes and reaching more than 130-fold induction after 3 hours in transgenic zebrafish embryos using the TAEL/C120 system.

induction of GFP expression can first be detected after 30 min of illumination and reaches a peak of more than 130-fold induction after 3 h of light treatment
peak GFP induction 130 foldtime to first detection of GFP induction 30 min
Claim 91performancesupports2021Source 2needs review

Blue-light illumination induces GFP expression detectable after 30 minutes and reaching more than 130-fold induction after 3 hours in transgenic zebrafish embryos using the TAEL/C120 system.

induction of GFP expression can first be detected after 30 min of illumination and reaches a peak of more than 130-fold induction after 3 h of light treatment
peak GFP induction 130 foldtime to first detection of GFP induction 30 min
Claim 92performancesupports2021Source 2needs review

Blue-light illumination induces GFP expression detectable after 30 minutes and reaching more than 130-fold induction after 3 hours in transgenic zebrafish embryos using the TAEL/C120 system.

induction of GFP expression can first be detected after 30 min of illumination and reaches a peak of more than 130-fold induction after 3 h of light treatment
peak GFP induction 130 foldtime to first detection of GFP induction 30 min
Claim 93performancesupports2021Source 2needs review

Blue-light illumination induces GFP expression detectable after 30 minutes and reaching more than 130-fold induction after 3 hours in transgenic zebrafish embryos using the TAEL/C120 system.

induction of GFP expression can first be detected after 30 min of illumination and reaches a peak of more than 130-fold induction after 3 h of light treatment
peak GFP induction 130 foldtime to first detection of GFP induction 30 min
Claim 94performancesupports2021Source 2needs review

Blue-light illumination induces GFP expression detectable after 30 minutes and reaching more than 130-fold induction after 3 hours in transgenic zebrafish embryos using the TAEL/C120 system.

induction of GFP expression can first be detected after 30 min of illumination and reaches a peak of more than 130-fold induction after 3 h of light treatment
peak GFP induction 130 foldtime to first detection of GFP induction 30 min
Claim 95usabilitysupports2021Source 2needs review

The method is described as a versatile and easy-to-use approach for optogenetic gene expression.

This method is a versatile and easy-to-use approach for optogenetic gene expression.
Claim 96usabilitysupports2021Source 2needs review

The method is described as a versatile and easy-to-use approach for optogenetic gene expression.

This method is a versatile and easy-to-use approach for optogenetic gene expression.
Claim 97usabilitysupports2021Source 2needs review

The method is described as a versatile and easy-to-use approach for optogenetic gene expression.

This method is a versatile and easy-to-use approach for optogenetic gene expression.
Claim 98usabilitysupports2021Source 2needs review

The method is described as a versatile and easy-to-use approach for optogenetic gene expression.

This method is a versatile and easy-to-use approach for optogenetic gene expression.
Claim 99usabilitysupports2021Source 2needs review

The method is described as a versatile and easy-to-use approach for optogenetic gene expression.

This method is a versatile and easy-to-use approach for optogenetic gene expression.
Claim 100method integrationsupports2018Source 1needs review

The review describes AFM as being integrated with complementary methods including optical or fluorescence microscopy, mechanosensitive fluorescent constructs, patch-clamp electrophysiology, and microstructured or fluidic devices.

Claim 101capability summarysupports2010Source 4needs review

Fluorescence microscopy enables specific labeling of biomolecules or supramolecular structures with fluorophores so that images report on processes involving the labeled molecules.

The use of fluorescence microscopy is advantageous because biomolecules or supramolecular structures of interest can be labeled specifically with fluorophores, so the images reveal information on processes involving only the labeled molecules.

Approval Evidence

4 sources4 linked approval claimsfirst-pass slug fluorescence-microscopy
fast and efficient modulation and localization of fluorescence at a subcellular level, through fluorescence microscopy

Source:

and by fluorescence microscopy

Source:

The supplied review summary explicitly states that AFM is integrated with complementary methods such as optical microscopy, and related item candidates explicitly name fluorescence microscopy.

Source:

The use of fluorescence microscopy is advantageous because biomolecules or supramolecular structures of interest can be labeled specifically with fluorophores, so the images reveal information on processes involving only the labeled molecules.

Source:

review scope summarysupports

Larval zebrafish enable in vivo microscopy for studying organ pathophysiology, including the pancreas and islets of Langerhans.

zebrafish larvae allow studying pathophysiology of many organs using in vivo microscopy. Here, we review the potential of the larval zebrafish pancreas in the context of islets of Langerhans and Type 1 diabetes.

Source:

translational positioningsupports

The review positions living larval zebrafish as a powerful translational research tool and forecasts replacement of many cell line-based studies for understanding organ pathophysiology in whole organisms.

These developments make the zebrafish larvae an extremely powerful research tool for translational research. We foresee that living larval zebrafish models will replace many cell line-based studies in understanding the contribution of molecules, organelles and cells to organ pathophysiology in whole organisms.

Source:

method integrationsupports

The review describes AFM as being integrated with complementary methods including optical or fluorescence microscopy, mechanosensitive fluorescent constructs, patch-clamp electrophysiology, and microstructured or fluidic devices.

Source:

capability summarysupports

Fluorescence microscopy enables specific labeling of biomolecules or supramolecular structures with fluorophores so that images report on processes involving the labeled molecules.

The use of fluorescence microscopy is advantageous because biomolecules or supramolecular structures of interest can be labeled specifically with fluorophores, so the images reveal information on processes involving only the labeled molecules.

Source:

Comparisons

Source-backed strengths

The supplied evidence supports subcellular localization of fluorescence and real-time monitoring in living larvae. It also indicates compatibility with fluorescent probes in larval zebrafish and applicability to organ-level studies such as the pancreas and islets of Langerhans.

Source:

induction of GFP expression can first be detected after 30 min of illumination and reaches a peak of more than 130-fold induction after 3 h of light treatment

Compared with confocal microscopy

fluorescence microscopy and confocal microscopy address a similar problem space because they share recombination, translation.

Shared frame: same top-level item type; shared target processes: recombination, translation; shared mechanisms: translation_control

Strengths here: looks easier to implement in practice.

fluorescence microscopy and light-sheet microscopy address a similar problem space because they share recombination, translation.

Shared frame: same top-level item type; shared target processes: recombination, translation; shared mechanisms: translation_control

Relative tradeoffs: appears more independently replicated.

fluorescence microscopy and optogenetic systems adapted to regulate gene expression address a similar problem space because they share localization, translation.

Shared frame: shared target processes: localization, translation; shared mechanisms: translation_control

Strengths here: looks easier to implement in practice.

Ranked Citations

  1. 1.
    StructuralSource 1Nature Reviews Physics2018Claim 100

    Extracted from this source document. Seeded from load plan for claim cl2.

  2. 2.
    StructuralSource 2Journal of Visualized Experiments2021Claim 79Claim 79Claim 79

    Extracted from this source document.

  3. 3.
    StructuralSource 3FEBS Letters2022Claim 23Claim 27Claim 23

    Seeded from load plan for claim cl1. Extracted from this source document.

  4. 4.
    StructuralSource 4Biophysical Reviews2010Claim 101

    Seeded from load plan for claim cl2. Extracted from this source document.