Toolkit/chemogenetics

chemogenetics

Multi-Component Switch·Research·Since 2018

Also known as: chemogenetic methods, chemo-genetics, chemogenetics, chemogenetic techniques, chemogenetic tools, DREADDs

Taxonomy: Mechanism Branch / Architecture. Workflows sit above the mechanism and technique branches rather than replacing them.

Summary

Chemogenetics is an engineering method in which target proteins are genetically engineered to interact with a designed chemical partner with high selectivity. It is used as a chemical-input strategy to manipulate protein or receptor function in cells and has also been used alongside optogenetics to perturb cellular structures such as specific microtubule subtypes.

Usefulness & Problems

Why this is useful

Chemogenetics is useful because it provides a selective chemical route to control receptor or protein function in cells, positioned as an alternative to conventional genetic engineering or native chemical ligands. The cited literature also places chemogenetics within broader molecular systems neuroscience approaches for manipulating circuits, brain networks, brain states, and behavior.

Source:

Conventionally, genetic engineering or chemical ligands have been used to control receptor functions in cells. As the alternative, chemogenetics has been proposed

Source:

Notably, some chemogenetic strategies have been used to reveal the receptor signaling of target cells in living animals.

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The engineered receptor dissects the function of one receptor member among a highly homologous receptor family in a cell-specific manner.

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we have used chemogenetics and optogenetics to disassemble specific MT subtypes by rapid recruitment of engineered MT-cleaving enzymes

Problem solved

This method addresses the problem of achieving selective external control over target protein or receptor function using a designed chemical input rather than relying only on endogenous ligands or standard genetic perturbation. The evidence also supports its use for controlled perturbation of defined cellular components, including microtubule subtype disassembly in living cells.

Source:

The engineered receptor dissects the function of one receptor member among a highly homologous receptor family in a cell-specific manner.

Problem links

adding a complementary perturbation modality to calcium-imaging-based studies

Literature

It provides a complementary manipulation approach within multimodal studies of depression mechanisms.

Source:

It provides a complementary manipulation approach within multimodal studies of depression mechanisms.

addresses prior difficulty manipulating astrocytes in a cell type-specific and non-invasive manner

Literature

It is positioned as a way to improve the study of astrocytes where earlier methods had difficulty achieving cell type-specific and non-invasive manipulation.

Source:

It is positioned as a way to improve the study of astrocytes where earlier methods had difficulty achieving cell type-specific and non-invasive manipulation.

causal activation of targeted midbrain neuron populations in mouse parkinsonism models

Literature

It provides a way to test whether activating defined PPN neuron classes can restore locomotor function in parkinsonian mice.

Source:

It provides a way to test whether activating defined PPN neuron classes can restore locomotor function in parkinsonian mice.

enables causal manipulation of defined neuronal populations

Literature

It enables focused manipulation of sleep-wake and circadian circuit nodes and is suggested to support less invasive therapeutic control of these circuits. The review positions it as a bridge from circuit discovery toward therapy.

Source:

It enables focused manipulation of sleep-wake and circadian circuit nodes and is suggested to support less invasive therapeutic control of these circuits. The review positions it as a bridge from circuit discovery toward therapy.

enables causal perturbation of defined neural circuits in depression models

Literature

It helps researchers probe the causal role of defined neuronal populations and circuits in depressive-like behaviors.

Source:

It helps researchers probe the causal role of defined neuronal populations and circuits in depressive-like behaviors.

enables causal testing of neural circuit contributions to anxiety and fear

Literature

It helps investigators causally probe how PFC-linked circuits orchestrate adaptive defensive behaviors and anxiety-related states.

Source:

It helps investigators causally probe how PFC-linked circuits orchestrate adaptive defensive behaviors and anxiety-related states.

enables closer examination of the behavioral impact of the serotonin system

Literature

It provides a way to causally test how serotonergic neuron excitability influences executive-function-related behaviors.

Source:

It provides a way to causally test how serotonergic neuron excitability influences executive-function-related behaviors.

enables controlled perturbation of defined biological systems for mechanistic study

Literature

It allows controlled perturbation of defined pathways or regions to study causal links between stress, immunity, and cardiovascular disease.

Source:

It allows controlled perturbation of defined pathways or regions to study causal links between stress, immunity, and cardiovascular disease.

enables control of specific cell types or pathways with systemic drug manipulation

Literature

It provides a way to manipulate targeted cells or pathways without implanted optical hardware and supports systemic control.

Source:

It provides a way to manipulate targeted cells or pathways without implanted optical hardware and supports systemic control.

enables functional interrogation of seizure circuits

Literature

It helps address unanswered questions in epilepsy by enabling circuit-level manipulation and analysis. The abstract links this capability to understanding seizure propagation pathways.

Source:

It helps address unanswered questions in epilepsy by enabling circuit-level manipulation and analysis. The abstract links this capability to understanding seizure propagation pathways.

enables functional perturbation of VOR-linked circuits beyond descriptive mapping

Literature

It helps move from anatomical or transcriptomic association to functional interrogation of VOR pathways. This is relevant for testing roles in motility, satiety, and energy homeostasis.

Source:

It helps move from anatomical or transcriptomic association to functional interrogation of VOR pathways. This is relevant for testing roles in motility, satiety, and energy homeostasis.

enables genetically targeted modulation of brain activity

Literature

It helps achieve more specific targeting of neural populations than broad biophysical methods.

Source:

It helps achieve more specific targeting of neural populations than broad biophysical methods.

enables more rapid progress in identifying neural circuits regulating stress-pathogenesis

Literature

It helps uncover neural circuits that regulate the pathogenesis of stress-induced disorders. The review states that such tools have accelerated progress in this area.

Source:

It helps uncover neural circuits that regulate the pathogenesis of stress-induced disorders. The review states that such tools have accelerated progress in this area.

enables selective manipulation of defined cell populations when studying stress vulnerability and resilience

Literature

It helps dissect which cell subtypes contribute to stress-induced outcomes, vulnerability, or resilience. This is useful when broad circuit or endocrine descriptions are too coarse.

Source:

It helps dissect which cell subtypes contribute to stress-induced outcomes, vulnerability, or resilience. This is useful when broad circuit or endocrine descriptions are too coarse.

enables targeted manipulation of neural activity

Literature

It helps test causal roles of circuit elements by manipulating activity.

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It helps test causal roles of circuit elements by manipulating activity.

enables targeted neuromodulation of defined neuronal populations and circuits in depression research

Literature

It allows researchers to manipulate defined circuits to investigate cellular mechanisms underlying depression and depressive-like behaviors.

Source:

It allows researchers to manipulate defined circuits to investigate cellular mechanisms underlying depression and depressive-like behaviors.

enables targeted perturbation of neural activity and gene-expression control in a model with complex behavior

Literature

It helps researchers manipulate defined neural processes while studying learning and memory mechanisms in flies.

Source:

It helps researchers manipulate defined neural processes while studying learning and memory mechanisms in flies.

may support more focused and less invasive therapies for sleep-wake disorders and related comorbidities

Literature

It enables focused manipulation of sleep-wake and circadian circuit nodes and is suggested to support less invasive therapeutic control of these circuits. The review positions it as a bridge from circuit discovery toward therapy.

Source:

It enables focused manipulation of sleep-wake and circadian circuit nodes and is suggested to support less invasive therapeutic control of these circuits. The review positions it as a bridge from circuit discovery toward therapy.

provides a gene-therapy strategy for controlling pain-associated cell activity

Literature

It provides a way to modulate pain-associated cell activity using gene-based tools.

Source:

It provides a way to modulate pain-associated cell activity using gene-based tools.

provides an alternative modality for PD gene-therapy intervention

Literature

It is presented as an alternative type of gene therapy for PD.

Source:

It is presented as an alternative type of gene therapy for PD.

provides a non-optical perturbation approach for pain-circuit manipulation

Literature

It offers a way to manipulate nociceptor or pain-circuit activity in mechanistic studies.

Source:

It offers a way to manipulate nociceptor or pain-circuit activity in mechanistic studies.

provides a perturbation modality that can be integrated with fMRI

Literature

It enables perturbation-based multimodal experiments that relate manipulated neural activity to fMRI readouts. This helps connect intervention and whole-brain function.

Source:

It enables perturbation-based multimodal experiments that relate manipulated neural activity to fMRI readouts. This helps connect intervention and whole-brain function.

providing an additional modality for epilepsy intervention

Literature

It offers a neuromodulatory alternative to static expression-based strategies.

Source:

It offers a neuromodulatory alternative to static expression-based strategies.

providing a way to test whether grafted neurons influence host brain function

Literature

It helps test whether anatomically integrated grafts actually influence circuit function.

Source:

It helps test whether anatomically integrated grafts actually influence circuit function.

providing targeted manipulation within a more sophisticated sleep-deprivation framework

Literature

It is proposed as part of a framework to reduce stress-related confounding introduced by traditional sleep-deprivation procedures.

Source:

It is proposed as part of a framework to reduce stress-related confounding introduced by traditional sleep-deprivation procedures.

supports causal interrogation of specific circuits involved in pain

Literature

It helps decode which specific circuits contribute to pain-related sensory, affective, and motivational-cognitive processes.

Source:

It helps decode which specific circuits contribute to pain-related sensory, affective, and motivational-cognitive processes.

supports mapping of local microcircuits and distributed macrocircuits relevant to epilepsy

Literature

It helps address unanswered questions in epilepsy by enabling circuit-level manipulation and analysis. The abstract links this capability to understanding seizure propagation pathways.

Source:

It helps address unanswered questions in epilepsy by enabling circuit-level manipulation and analysis. The abstract links this capability to understanding seizure propagation pathways.

supports targeted study of ictogenesis mechanisms

Literature

It provides a targeted way to probe seizure-generating circuitry rather than relying only on globally acting anti-epileptic interventions.

Source:

It provides a targeted way to probe seizure-generating circuitry rather than relying only on globally acting anti-epileptic interventions.

Published Workflows

Objective: Use calcium imaging, together with complementary modalities, to elucidate cellular and circuit mechanisms underlying depression and identify depression-related cell types and neural circuits.

Why it works: The review frames calcium imaging as a core activity-readout method and emphasizes integrating it with complementary behavioral and perturbation/measurement modalities to better elucidate depression-related cellular and circuit mechanisms.

physiologically relevant calcium dynamicscellular mechanisms underlying depressioncircuit mechanisms underlying depressioncalcium imagingbehavioral paradigmselectrophysiologyoptogeneticschemogenetics

Objective: Map, monitor, and manipulate neural circuitry with increasing functional precision.

Why it works: The review frames neural-circuit study as requiring complementary stages: anatomical tracing to define connectivity, monitoring to observe activity patterns, and manipulation to infer function causally.

genetic targetingviral tracingelectrophysiological recordingoptical activity sensingneurochemical sensingactivity manipulationrecombination-based targetingactivity-driven targetingviral tracingelectrophysiologycalcium imagingvoltage imagingbiosensor-based monitoringoptogeneticschemogeneticsgenetic ablation

Stages

  1. 1.
    Genetic targeting of neural cell populations(library_design)

    The review states that cell-type-specific genetic tools allow interrogation of neural circuits with increased precision.

    Selection: cell-type-specific access using recombination-based or activity-driven genetic targeting approaches

  2. 2.
    Anatomical tracing of neural circuits(functional_characterization)

    The abstract states that functionally precise brain mapping requires anatomically tracing neural circuits.

    Selection: use contemporary viral tracing strategies to define circuit architecture

  3. 3.
    Monitoring neural activity patterns(functional_characterization)

    The abstract states that functionally precise mapping requires monitoring activity patterns and lists multiple monitoring modalities.

    Selection: use electrophysiological recording methods, calcium indicators, voltage indicators, and neurotransmitter or neuropeptide biosensors to observe circuit function

  4. 4.
    Manipulation of neural activity to infer function(confirmatory_validation)

    The abstract states that manipulating neural activity is required to infer function.

    Selection: use genetically targeted cellular ablation, optogenetics, chemogenetics, or ion-channel over-expression for acute or chronic perturbation

Objective: Test whether cell-type-specific activation of pedunculopontine nucleus neuron populations can restore locomotor function in mouse models of parkinsonism.

Why it works: The abstract frames the PPN as downstream of the basal ganglia and therefore a suitable intervention point for ameliorating parkinsonian motor symptoms; activating defined PPN cell types is expected to reveal whether this downstream node can bypass dopamine-block-related locomotor deficits.

excitation of caudal glutamatergic PPN neuronscomparison with local GABAergic PPN neuron targetingtesting independence from nearby glutamatergic cuneiform neuron activitychemogeneticsoptogeneticsin vivo cell-type-specific activation

Objective: Identify genes and molecular programs associated with Drosophila long-term memory formation and consolidation.

Why it works: The review describes a progression from candidate-based screens to broader transcriptome analysis because memory formation triggers broad and temporally structured transcriptional responses, while later interpretation requires localization to specific neurons and synaptic compartments.

activity-dependent transcriptionde novo protein synthesislocalized translationsynapse-specific confinement of plasticity-related changescandidate screeningtranscriptome analysisprecise gene-expression controlneural manipulation

Stages

  1. 1.
    Candidate screening(broad_screen)

    The review states that the search for genes expressed after memory acquisition began with candidate screenings.

    Selection: screenings of more or less specific candidates for genes expressed as a result of memory acquisition

  2. 2.
    Broad transcriptome analysis(functional_characterization)

    This stage broadens discovery beyond specific candidates and captures the rapid, extensive, and often transient transcriptional wave induced by memory formation.

    Selection: broad studies based on transcriptome analysis to capture memory-induced transcriptional changes

  3. 3.
    Localized and cell-type-specific interpretation(secondary_characterization)

    The review emphasizes that memory circuitry is complex and that relevant changes are localized in time, neuron type, and subcellular compartment.

    Selection: map memory-related changes to specific neurons, times, and subcellular locations

  4. 4.
    Functional follow-up of newly discovered molecular actors(confirmatory_validation)

    The review states that recent studies identify many new molecular actors and that this information will lead to future functional studies.

    Selection: newly identified proteins and molecular actors not previously involved in learning and memory

Objective: Repair damaged basal ganglia circuitry in adult mammalian brain using neuronal replacement while assessing whether grafted cells anatomically and functionally integrate with host circuits.

Why it works: The review frames circuitry repair as depending first on donor-cell survival and integration into host circuits, and newer connectomics plus functional perturbation methods as enabling more direct study of graft-host connectivity and impact on host brain function.

re-establishment of afferent and efferent host connectionsanatomical and functional integration into lesioned circuitrycell transplantationbrain connectomicschemogeneticsoptogenetics

Stages

  1. 1.
    Donor cell implantation for circuitry repair(library_build)

    The review centers on implantation of donor neuronal populations as the starting intervention for attempting circuitry repair.

    Selection: Use fetal neuroblasts or stem cell-derived neuronal precursors as donor material for lesioned basal ganglia circuitry repair.

  2. 2.
    Post-graft survival and maturation assessment(functional_characterization)

    The review states that recent progress provided evidence that striatal and nigral progenitors can survive and mature in the lesioned brain, making this a prerequisite for later connectivity and function studies.

  3. 3.
    Connectivity mapping of graft-host integration(secondary_characterization)

    The review identifies re-establishment of afferent and efferent connections as central to repair and highlights connectomics as enabling studies of graft-host integration.

    Selection: Determine whether grafted neurons re-establish afferent and efferent connections with the host.

  4. 4.
    Functional interrogation of graft impact(confirmatory_validation)

    After anatomical integration is established, the review points to chemogenetics and optogenetics as tools for testing whether grafted neurons influence host function.

    Selection: Use chemo- and optogenetic methods to study the capacity of grafted neurons to impact host brain function.

Objective: Design sleep-deprivation procedures that minimize stress confounding while enabling investigation of sleep-loss consequences.

Why it works: The review argues that traditional deprivation methods can induce stress per se, so using more precise neuromodulation and improved real-time scoring could better separate effects of sleep loss from stress-related artifacts.

precise neuromodulationreal-time sleep-state scoringchemogeneticsoptogeneticsautomated real-time sleep-scoring algorithms

Stages

  1. 1.
    Precise neuromodulation-based sleep manipulation(functional_characterization)

    The review identifies traditional sensory-motor stimulation as potentially stressful and therefore confounding.

    Selection: Use precise neuromodulation approaches instead of traditional exogenous sensory-motor stimulation for sleep-deprivation procedures.

  2. 2.
    Automated real-time sleep-state scoring(functional_characterization)

    The review proposes improved automated real-time sleep-scoring algorithms as part of a more sophisticated framework.

    Selection: Incorporate improved automated real-time sleep-scoring algorithms into sleep-deprivation procedures.

Objective: Use targeted neural activity recording and perturbation tools to dissect neuron-level mechanisms of seizure generation and support development of more targeted anti-epileptic therapies.

Why it works: The review frames targeted recording and perturbation as a way to move beyond broad excitation/inhibition suppression and identify more precise intervention points for epilepsy therapy.

neuron-level interactions underlying ictogenesispathological hypersynchronous activityoptical imagingoptogeneticschemogenetics

Objective: Link specific neural cell populations and circuits to behavioral outputs by selectively controlling defined cells and measuring resulting neural and behavioral changes in vivo.

Why it works: The review abstract describes a logic in which molecularly defined cell populations are selectively controlled with engineered GPCRs and then assessed through neural and behavioral readouts, allowing links between circuit activity and behavior to be inferred.

engineered GPCR-mediated activation of neuronal firingengineered GPCR-mediated silencing of neuronal firingchemogeneticsbehavioral phenotypingelectrophysiological readoutbiochemical readoutimaging in freely moving animals

Stages

  1. 1.
    Selective chemogenetic targeting of defined cell populations(library_design)

    This stage exists to establish selective control over the neural population whose contribution to behavior is being tested.

    Selection: Target molecularly defined subsets of cells with engineered GPCRs capable of activating or silencing neuronal firing.

  2. 2.
    In vivo DREADD-mediated perturbation of neuronal activity(functional_characterization)

    This stage creates the causal perturbation needed to test how specific neuronal populations influence behavior.

    Selection: Use DREADDs to activate or silence neuronal firing through engineered GPCRs in vivo.

  3. 3.
    Multimodal readout of neural and behavioral outputs(secondary_characterization)

    This stage exists to connect targeted perturbation to measurable neural and behavioral consequences.

    Selection: Monitor electrophysiological, biochemical, and behavioral outputs of specific neuronal types after DREADD perturbation.

  4. 4.
    Imaging-coupled whole-brain network interpretation in freely moving animals(confirmatory_validation)

    The abstract states that imaging-coupled chemogenetics enables deconstruction of complex whole-brain networks fundamental to behavioral states.

    Selection: Couple chemogenetics with imaging techniques to monitor neural activity in freely moving animals.

Steps

  1. 1.
    Target molecularly defined cell populations with engineered GPCRschemogenetic perturbation system

    Establish selective control over the neuronal population whose role in behavior will be tested.

    The abstract makes selective targeting the enabling prerequisite for later causal perturbation and behavioral interpretation.

  2. 2.
    Activate or silence neuronal firing in vivo using DREADDsin vivo actuator-responsive receptor system

    Generate a causal perturbation in the selected neural population.

    Perturbation follows targeting because the review's logic is to first define the cells and then manipulate their activity to test behavioral consequences.

  3. 3.
    Measure electrophysiological, biochemical, and behavioral outputs after perturbationperturbation source for downstream readout

    Determine how manipulation of specific neuronal types relates to brain activity and behavior.

    The abstract explicitly places these readouts after DREADD use because they are the evidence used to interpret the consequences of the perturbation.

  4. 4.
    Combine chemogenetic perturbation with imaging in freely moving animalschemogenetic perturbation component in combined imaging workflow

    Extend cell-type and circuit-level findings to whole-brain network interpretation during behavioral states.

    The abstract presents imaging coupling as a later integrative layer that builds on prior perturbation and output measurements to interpret complex whole-brain networks.

Taxonomy & Function

Primary hierarchy

Mechanism Branch

Architecture: A composed arrangement of multiple parts that instantiates one or more mechanisms.

Target processes

diagnosticeditinglocalizationrecombinationsignalingtranslation

Input: Chemical

Implementation Constraints

cofactor dependency: cofactor requirement unknownencoding mode: genetically encodedimplementation constraint: context specific validationimplementation constraint: multi component delivery burdenimplementation constraint: payload burdenoperating role: sensorswitch architecture: cleavageswitch architecture: multi componentswitch architecture: recruitment

Implementation requires genetic engineering of the target protein so that it selectively recognizes a designed chemical partner. The provided evidence does not specify construct architectures, delivery methods, cofactors, expression systems, or particular small-molecule chemistries.

The supplied evidence does not provide quantitative performance metrics, temporal resolution, reversibility, dose-response properties, or off-target profiles. It also does not specify particular chemogenetic receptor platforms, chemical ligands, or the extent of validation across organisms and cell types.

Validation

Cell-freeBacteriaMammalianMouseHumanTherapeuticIndep. Replication

Observations

successMouseapplication demomouse

locomotor function rescue

Inferred from claim c2 during normalization. In vivo cell-type-specific activation of caudal glutamatergic PPN neurons restores or normalizes severe locomotor deficits in two mouse models of parkinsonism caused by acute pharmacological blockade of dopamine transmission. Derived from claim c2. Quoted text: Here, we use in vivo cell-type specific PPN activation to restore motor function in two mouse models of parkinsonism made by acute pharmacological blockage of dopamine transmission. With a combination of chemo- and opto-genetics, we show that excitation of caudal glutamatergic PPN neurons can normalize the otherwise severe locomotor deficit in PD

Source:

Supporting Sources

Source 28review2025International Journal of Molecular Sciences

Ranked Claims

Claim 1application scopesupports2025Source 6needs review

Calcium imaging is used to identify depression-related cell types and neural circuits.

Claim 2capabilitysupports2025Source 21needs review

Optogenetics and chemogenetics enable precise control of specific neuronal types and neural circuits for investigating cellular mechanisms underlying depression.

These techniques enable the precise control of specific neuronal types and neural circuits, allowing researchers to investigate the cellular mechanisms underlying depression.
Claim 3capability summarysupports2025Source 21needs review

Optogenetics and chemogenetics enable precise control of specific neuronal types and neural circuits for investigating cellular mechanisms underlying depression.

Claim 4comparative review scopesupports2025Source 11needs review

The review comparatively analyzes biophysical, genetic, and biological neuromodulation approaches with emphasis on molecular targets and translational potential.

Claim 5evaluation axessupports2025Source 11needs review

The reviewed neuromodulation methods were assessed based on specificity, safety, reversibility, and mechanistic clarity.

Claim 6field gapsupports2025Source 11needs review

A critical gap in commonly used neuromodulation methods is incomplete mechanistic understanding, and identifying molecular targets may improve therapeutic precision.

Claim 7future direction summarysupports2025Source 21needs review

The review describes sonogenetics and odourgenetics as current research directions developed based on optogenetics and chemogenetics.

Claim 8mechanism and delivery tradeoffsupports2025Source 11needs review

Botulinum neurotoxins provide long-lasting yet reversible inhibition through well-characterized molecular pathways but require stereotaxic injections and remain invasive.

Claim 9mechanistic limitationsupports2025Source 11needs review

Biophysical neuromodulation methods are widely used in clinical practice but often rely on empirical outcomes because their molecular targets are undefined.

Claim 10method compositionsupports2025Source 6needs review

Calcium imaging primarily uses genetically encoded calcium indicators or synthetic fluorescent dyes to detect physiologically relevant calcium dynamics.

Claim 11multimodal integrationsupports2025Source 6needs review

The review summarizes integration of calcium indicators with behavioral paradigms, electrophysiology, optogenetics, and chemogenetics to elucidate cellular and circuit mechanisms underlying depression.

Claim 12precision vs translation tradeoffsupports2025Source 11needs review

Genetic neuromodulation tools offer cell-type precision in experimental systems but face translational barriers related to delivery and safety.

Claim 13relationshipsupports2025Source 21needs review

Sonogenetics and odourgenetics are described as developed based on optogenetics and chemogenetics.

describes the current state of research on sonogenetics and odourgenetics developed based on optogenetics and chemogenetics
Claim 14research impactsupports2025Source 21needs review

Advances in optogenetics and chemogenetics have significantly contributed to understanding neural circuits involved in depression.

The advancement in these techniques has significantly contributed to the understanding of the neural circuits involved in depression
Claim 15review summarysupports2025Source 21needs review

Advances in optogenetics and chemogenetics have significantly contributed to understanding neural circuits involved in depression.

Claim 16review summarysupports2025Source 6needs review

Calcium imaging is a pivotal technique for monitoring neuronal and glial activity in neuroscience research.

Claim 17scopesupports2025Source 21needs review

The review covers applications of optogenetics and chemogenetics in depression-related rodent brain regions including the ventral tegmental area, nucleus accumbens, prefrontal cortex, hippocampus, dorsal raphe nucleus, and lateral habenula.

This review primarily focuses on the application of optogenetics and chemogenetics in several brain regions closely associated with depressive-like behaviors in rodent models, such as the ventral tegmental area, nucleus accumbens, prefrontal cortex, hippocampus, dorsal raphe nucleus, and lateral habenula
Claim 18tooling summarysupports2025Source 28needs review

Spatial transcriptomics, single-nucleus RNA sequencing, chemogenetics, and optogenetics are described as transformative tools for mapping and manipulating VOR-expressing circuits.

Claim 19translational implicationsupports2025Source 6needs review

Synthesized calcium-imaging findings are presented as establishing a framework for developing precision-targeted antidepressant interventions.

Claim 20translational potentialsupports2025Source 21needs review

Optogenetics and chemogenetics have provided theoretical support for the development of novel antidepressants.

Additionally, these techniques have provided theoretical support for the development of novel antidepressants.
Claim 21translational potentialsupports2025Source 21needs review

When combined with other emerging technologies, optogenetics and chemogenetics provide novel therapeutic targets and diagnostic tools for clinical treatment of depression.

Claim 22translational potentialsupports2025Source 21needs review

When combined with other emerging technologies, optogenetics and chemogenetics provide novel therapeutic targets and diagnostic tools for the clinical treatment of depression.

when combined with other emerging technologies, they provide novel therapeutic targets and diagnostic tools for the clinical treatment of depression.
Claim 23review summarysupports2024Source 13needs review

Gene-therapy modalities including ASOs, RNAi, CRISPR, and virus-based delivery systems have played crucial roles in discovering and validating new pain targets.

Claim 24scope of reviewsupports2024Source 13needs review

The review covers ASOs, siRNAs, optogenetics, chemogenetics, CRISPR, and their delivery methods targeting primary sensory neurons and non-neuronal cells including glia and chondrocytes.

Claim 25translational landscapesupports2024Source 13needs review

Although gene therapy-based clinical trials have increased, trials focused on pain as the primary outcome remain uncommon.

Claim 26application scopesupports2023Source 15needs review

Advanced diagnostics for cardiovascular diseases, including COVID-19-associated disease, are discussed with a focus on the role of inflammation in cardiomyopathies and arrhythmias.

First, we discuss the emerging clinical relevance of advanced diagnostics for cardiovascular diseases, including those associated with COVID-19-with a focus on the role of inflammation in cardiomyopathies and arrhythmias.
Claim 27mechanistic scopesupports2023Source 15needs review

The review emphasizes that emotional stress acting through defined brain regions strongly influences viral and cardiovascular disorders.

This latter line of investigation emphasizes the strength of influence of emotional stress-acting through defined brain regions-upon viral and cardiovascular disorders.
Claim 28organ system interaction summarysupports2023Source 15needs review

The review states that newly identified immunological interactions at organ and system levels affect cardiovascular pathogenesis, including intestinal-system influences moving toward therapeutic exploitation.

Second, we consider newly identified immunological interactions at organ and system levels which affect cardiovascular pathogenesis. Thus, studies into immune influences arising from the intestinal system are moving towards therapeutic exploitation.
Claim 29review scope summarysupports2023Source 15needs review

The review focuses on selected cardiovascular immunology studies that use advanced molecular-genetic methods including genome-wide epi/transcriptome mapping, variant scanning, optogenetics, and chemogenetics.

Here, we specifically focus on selected studies taking advantage of advanced state-of-the-art molecular genetic methods ranging from genome-wide epi/transcriptome mapping and variant scanning to optogenetics and chemogenetics.
Claim 30tool capability summarysupports2023Source 15needs review

Powerful new research tools have enabled novel insight into brain-immune system interactions at unprecedented resolution.

Further, powerful new research tools have enabled novel insight into brain-immune system interactions at unprecedented resolution.
Claim 31tool usage summarysupports2023Source 16needs review

The reviewed literature uses chemogenetic, optogenetic, genetic manipulation, electrophysiology, pharmacology, and immunohistochemistry approaches to investigate the role of specific cell subtypes in the stress response.

many studies have used state-of-the-art tools such as chemogenetic, optogenetic, genetic manipulation, electrophysiology, pharmacology, and immunohistochemistry to investigate the role of specific cell subtypes in the stress response
Claim 32translation caveatsupports2023Source 15needs review

Several challenges remain before the full impact of these new findings reaches the clinical arena.

Several challenges need to be overcome before the full impact of these far-reaching new findings will hit the clinical arena.
Claim 33application effectsupports2022Source 25needs review

In vivo cell-type-specific activation of caudal glutamatergic PPN neurons restores or normalizes severe locomotor deficits in two mouse models of parkinsonism caused by acute pharmacological blockade of dopamine transmission.

Here, we use in vivo cell-type specific PPN activation to restore motor function in two mouse models of parkinsonism made by acute pharmacological blockage of dopamine transmission. With a combination of chemo- and opto-genetics, we show that excitation of caudal glutamatergic PPN neurons can normalize the otherwise severe locomotor deficit in PD
Claim 34capability summarysupports2022Source 8needs review

Chemogenetics is presented as an alternative to conventional genetic engineering or chemical ligands for controlling receptor functions in cells.

Conventionally, genetic engineering or chemical ligands have been used to control receptor functions in cells. As the alternative, chemogenetics has been proposed
Claim 35capability summarysupports2022Source 8needs review

Chemogenetics is presented as an alternative to conventional genetic engineering or chemical ligands for controlling receptor functions in cells.

Conventionally, genetic engineering or chemical ligands have been used to control receptor functions in cells. As the alternative, chemogenetics has been proposed
Claim 36capability summarysupports2022Source 8needs review

Chemogenetics is presented as an alternative to conventional genetic engineering or chemical ligands for controlling receptor functions in cells.

Conventionally, genetic engineering or chemical ligands have been used to control receptor functions in cells. As the alternative, chemogenetics has been proposed
Claim 37capability summarysupports2022Source 8needs review

Chemogenetics is presented as an alternative to conventional genetic engineering or chemical ligands for controlling receptor functions in cells.

Conventionally, genetic engineering or chemical ligands have been used to control receptor functions in cells. As the alternative, chemogenetics has been proposed
Claim 38capability summarysupports2022Source 8needs review

Chemogenetics is presented as an alternative to conventional genetic engineering or chemical ligands for controlling receptor functions in cells.

Conventionally, genetic engineering or chemical ligands have been used to control receptor functions in cells. As the alternative, chemogenetics has been proposed
Claim 39capability summarysupports2022Source 8needs review

Chemogenetics is presented as an alternative to conventional genetic engineering or chemical ligands for controlling receptor functions in cells.

Conventionally, genetic engineering or chemical ligands have been used to control receptor functions in cells. As the alternative, chemogenetics has been proposed
Claim 40capability summarysupports2022Source 8needs review

Chemogenetics is presented as an alternative to conventional genetic engineering or chemical ligands for controlling receptor functions in cells.

Conventionally, genetic engineering or chemical ligands have been used to control receptor functions in cells. As the alternative, chemogenetics has been proposed
Claim 41conceptual frameworksupports2022Source 27needs review

These molecular approaches are motivating the emergence of a molecularly oriented systems neuroscience focused on how spatial and temporal patterns of molecular systems modulate circuits, brain networks, brain states, and behavior.

These molecular approaches, with the specificity and temporal resolution appropriate for systems studies, promise to infuse the field with novel ideas, emphases and directions, and are motivating the emergence of a molecularly oriented systems neuroscience, a new discipline that studies how the spatial and temporal patterns of molecular systems modulate circuits and brain networks, and consequently shape the properties of brain states and behavior.
Claim 42conceptual frameworksupports2022Source 27needs review

These molecular approaches are motivating the emergence of a molecularly oriented systems neuroscience focused on how spatial and temporal patterns of molecular systems modulate circuits, brain networks, brain states, and behavior.

These molecular approaches, with the specificity and temporal resolution appropriate for systems studies, promise to infuse the field with novel ideas, emphases and directions, and are motivating the emergence of a molecularly oriented systems neuroscience, a new discipline that studies how the spatial and temporal patterns of molecular systems modulate circuits and brain networks, and consequently shape the properties of brain states and behavior.
Claim 43conceptual frameworksupports2022Source 27needs review

These molecular approaches are motivating the emergence of a molecularly oriented systems neuroscience focused on how spatial and temporal patterns of molecular systems modulate circuits, brain networks, brain states, and behavior.

These molecular approaches, with the specificity and temporal resolution appropriate for systems studies, promise to infuse the field with novel ideas, emphases and directions, and are motivating the emergence of a molecularly oriented systems neuroscience, a new discipline that studies how the spatial and temporal patterns of molecular systems modulate circuits and brain networks, and consequently shape the properties of brain states and behavior.
Claim 44conceptual frameworksupports2022Source 27needs review

These molecular approaches are motivating the emergence of a molecularly oriented systems neuroscience focused on how spatial and temporal patterns of molecular systems modulate circuits, brain networks, brain states, and behavior.

These molecular approaches, with the specificity and temporal resolution appropriate for systems studies, promise to infuse the field with novel ideas, emphases and directions, and are motivating the emergence of a molecularly oriented systems neuroscience, a new discipline that studies how the spatial and temporal patterns of molecular systems modulate circuits and brain networks, and consequently shape the properties of brain states and behavior.
Claim 45conceptual frameworksupports2022Source 27needs review

These molecular approaches are motivating the emergence of a molecularly oriented systems neuroscience focused on how spatial and temporal patterns of molecular systems modulate circuits, brain networks, brain states, and behavior.

These molecular approaches, with the specificity and temporal resolution appropriate for systems studies, promise to infuse the field with novel ideas, emphases and directions, and are motivating the emergence of a molecularly oriented systems neuroscience, a new discipline that studies how the spatial and temporal patterns of molecular systems modulate circuits and brain networks, and consequently shape the properties of brain states and behavior.
Claim 46conceptual frameworksupports2022Source 27needs review

These molecular approaches are motivating the emergence of a molecularly oriented systems neuroscience focused on how spatial and temporal patterns of molecular systems modulate circuits, brain networks, brain states, and behavior.

These molecular approaches, with the specificity and temporal resolution appropriate for systems studies, promise to infuse the field with novel ideas, emphases and directions, and are motivating the emergence of a molecularly oriented systems neuroscience, a new discipline that studies how the spatial and temporal patterns of molecular systems modulate circuits and brain networks, and consequently shape the properties of brain states and behavior.
Claim 47conceptual frameworksupports2022Source 27needs review

These molecular approaches are motivating the emergence of a molecularly oriented systems neuroscience focused on how spatial and temporal patterns of molecular systems modulate circuits, brain networks, brain states, and behavior.

These molecular approaches, with the specificity and temporal resolution appropriate for systems studies, promise to infuse the field with novel ideas, emphases and directions, and are motivating the emergence of a molecularly oriented systems neuroscience, a new discipline that studies how the spatial and temporal patterns of molecular systems modulate circuits and brain networks, and consequently shape the properties of brain states and behavior.
Claim 48design considerationsupports2022Source 9needs review

Designing multimodal experiments that apply these tools within fMRI studies involves challenges and experimental choices.

Claim 49field trendsupports2022Source 27needs review

Systems neuroscience has recently incorporated approaches for manipulating and imaging neurons, neurocircuits, and their inputs and outputs, including optogenetics, chemogenetics, two-photon imaging, and head mounted fluorescent microscopes.

More recently, systems neuroscience has received an infusion of approaches and techniques that allow the manipulation (e.g., optogenetics, chemogenetics) and imaging (e.g., two-photon imaging, head mounted fluorescent microscopes) of neurons, neurocircuits, their inputs and outputs.
Claim 50field trendsupports2022Source 27needs review

Systems neuroscience has recently incorporated approaches for manipulating and imaging neurons, neurocircuits, and their inputs and outputs, including optogenetics, chemogenetics, two-photon imaging, and head mounted fluorescent microscopes.

More recently, systems neuroscience has received an infusion of approaches and techniques that allow the manipulation (e.g., optogenetics, chemogenetics) and imaging (e.g., two-photon imaging, head mounted fluorescent microscopes) of neurons, neurocircuits, their inputs and outputs.
Claim 51field trendsupports2022Source 27needs review

Systems neuroscience has recently incorporated approaches for manipulating and imaging neurons, neurocircuits, and their inputs and outputs, including optogenetics, chemogenetics, two-photon imaging, and head mounted fluorescent microscopes.

More recently, systems neuroscience has received an infusion of approaches and techniques that allow the manipulation (e.g., optogenetics, chemogenetics) and imaging (e.g., two-photon imaging, head mounted fluorescent microscopes) of neurons, neurocircuits, their inputs and outputs.
Claim 52field trendsupports2022Source 27needs review

Systems neuroscience has recently incorporated approaches for manipulating and imaging neurons, neurocircuits, and their inputs and outputs, including optogenetics, chemogenetics, two-photon imaging, and head mounted fluorescent microscopes.

More recently, systems neuroscience has received an infusion of approaches and techniques that allow the manipulation (e.g., optogenetics, chemogenetics) and imaging (e.g., two-photon imaging, head mounted fluorescent microscopes) of neurons, neurocircuits, their inputs and outputs.
Claim 53field trendsupports2022Source 27needs review

Systems neuroscience has recently incorporated approaches for manipulating and imaging neurons, neurocircuits, and their inputs and outputs, including optogenetics, chemogenetics, two-photon imaging, and head mounted fluorescent microscopes.

More recently, systems neuroscience has received an infusion of approaches and techniques that allow the manipulation (e.g., optogenetics, chemogenetics) and imaging (e.g., two-photon imaging, head mounted fluorescent microscopes) of neurons, neurocircuits, their inputs and outputs.
Claim 54field trendsupports2022Source 27needs review

Systems neuroscience has recently incorporated approaches for manipulating and imaging neurons, neurocircuits, and their inputs and outputs, including optogenetics, chemogenetics, two-photon imaging, and head mounted fluorescent microscopes.

More recently, systems neuroscience has received an infusion of approaches and techniques that allow the manipulation (e.g., optogenetics, chemogenetics) and imaging (e.g., two-photon imaging, head mounted fluorescent microscopes) of neurons, neurocircuits, their inputs and outputs.
Claim 55field trendsupports2022Source 27needs review

Systems neuroscience has recently incorporated approaches for manipulating and imaging neurons, neurocircuits, and their inputs and outputs, including optogenetics, chemogenetics, two-photon imaging, and head mounted fluorescent microscopes.

More recently, systems neuroscience has received an infusion of approaches and techniques that allow the manipulation (e.g., optogenetics, chemogenetics) and imaging (e.g., two-photon imaging, head mounted fluorescent microscopes) of neurons, neurocircuits, their inputs and outputs.
Claim 56in vivo applicability summarysupports2022Source 8needs review

Some chemogenetic strategies have been used to reveal receptor signaling of target cells in living animals.

Notably, some chemogenetic strategies have been used to reveal the receptor signaling of target cells in living animals.
Claim 57in vivo applicability summarysupports2022Source 8needs review

Some chemogenetic strategies have been used to reveal receptor signaling of target cells in living animals.

Notably, some chemogenetic strategies have been used to reveal the receptor signaling of target cells in living animals.
Claim 58in vivo applicability summarysupports2022Source 8needs review

Some chemogenetic strategies have been used to reveal receptor signaling of target cells in living animals.

Notably, some chemogenetic strategies have been used to reveal the receptor signaling of target cells in living animals.
Claim 59in vivo applicability summarysupports2022Source 8needs review

Some chemogenetic strategies have been used to reveal receptor signaling of target cells in living animals.

Notably, some chemogenetic strategies have been used to reveal the receptor signaling of target cells in living animals.
Claim 60in vivo applicability summarysupports2022Source 8needs review

Some chemogenetic strategies have been used to reveal receptor signaling of target cells in living animals.

Notably, some chemogenetic strategies have been used to reveal the receptor signaling of target cells in living animals.
Claim 61in vivo applicability summarysupports2022Source 8needs review

Some chemogenetic strategies have been used to reveal receptor signaling of target cells in living animals.

Notably, some chemogenetic strategies have been used to reveal the receptor signaling of target cells in living animals.
Claim 62in vivo applicability summarysupports2022Source 8needs review

Some chemogenetic strategies have been used to reveal receptor signaling of target cells in living animals.

Notably, some chemogenetic strategies have been used to reveal the receptor signaling of target cells in living animals.
Claim 63mechanism summarysupports2022Source 8needs review

In chemogenetics, target proteins are genetically engineered to interact with a designed chemical partner with high selectivity.

chemogenetics has been proposed, in which target proteins are genetically engineered to interact with a designed chemical partner with high selectivity
Claim 64mechanism summarysupports2022Source 8needs review

In chemogenetics, target proteins are genetically engineered to interact with a designed chemical partner with high selectivity.

chemogenetics has been proposed, in which target proteins are genetically engineered to interact with a designed chemical partner with high selectivity
Claim 65mechanism summarysupports2022Source 8needs review

In chemogenetics, target proteins are genetically engineered to interact with a designed chemical partner with high selectivity.

chemogenetics has been proposed, in which target proteins are genetically engineered to interact with a designed chemical partner with high selectivity
Claim 66mechanism summarysupports2022Source 8needs review

In chemogenetics, target proteins are genetically engineered to interact with a designed chemical partner with high selectivity.

chemogenetics has been proposed, in which target proteins are genetically engineered to interact with a designed chemical partner with high selectivity
Claim 67mechanism summarysupports2022Source 8needs review

In chemogenetics, target proteins are genetically engineered to interact with a designed chemical partner with high selectivity.

chemogenetics has been proposed, in which target proteins are genetically engineered to interact with a designed chemical partner with high selectivity
Claim 68mechanism summarysupports2022Source 8needs review

In chemogenetics, target proteins are genetically engineered to interact with a designed chemical partner with high selectivity.

chemogenetics has been proposed, in which target proteins are genetically engineered to interact with a designed chemical partner with high selectivity
Claim 69mechanism summarysupports2022Source 8needs review

In chemogenetics, target proteins are genetically engineered to interact with a designed chemical partner with high selectivity.

chemogenetics has been proposed, in which target proteins are genetically engineered to interact with a designed chemical partner with high selectivity
Claim 70methodological rolesupports2022Source 23needs review

Optogenetic and chemogenetic circuit-based approaches allow direct examination of hypotheses drawn from existing psychological concepts.

allowing direct examination of hypotheses drawn from existing psychological concepts
Claim 71review scope statementsupports2022Source 27needs review

The review covers novel approaches that allow manipulation and imaging of specific molecular mechanisms in specific cells, cell ensembles, and brain regions.

Here, we will review novel approaches that allow the manipulation and imaging of specific molecular mechanisms in specific cells (not just neurons), cell ensembles and brain regions.
Claim 72review scope statementsupports2022Source 27needs review

The review covers novel approaches that allow manipulation and imaging of specific molecular mechanisms in specific cells, cell ensembles, and brain regions.

Here, we will review novel approaches that allow the manipulation and imaging of specific molecular mechanisms in specific cells (not just neurons), cell ensembles and brain regions.
Claim 73review scope statementsupports2022Source 27needs review

The review covers novel approaches that allow manipulation and imaging of specific molecular mechanisms in specific cells, cell ensembles, and brain regions.

Here, we will review novel approaches that allow the manipulation and imaging of specific molecular mechanisms in specific cells (not just neurons), cell ensembles and brain regions.
Claim 74review scope statementsupports2022Source 27needs review

The review covers novel approaches that allow manipulation and imaging of specific molecular mechanisms in specific cells, cell ensembles, and brain regions.

Here, we will review novel approaches that allow the manipulation and imaging of specific molecular mechanisms in specific cells (not just neurons), cell ensembles and brain regions.
Claim 75review scope statementsupports2022Source 27needs review

The review covers novel approaches that allow manipulation and imaging of specific molecular mechanisms in specific cells, cell ensembles, and brain regions.

Here, we will review novel approaches that allow the manipulation and imaging of specific molecular mechanisms in specific cells (not just neurons), cell ensembles and brain regions.
Claim 76review scope statementsupports2022Source 27needs review

The review covers novel approaches that allow manipulation and imaging of specific molecular mechanisms in specific cells, cell ensembles, and brain regions.

Here, we will review novel approaches that allow the manipulation and imaging of specific molecular mechanisms in specific cells (not just neurons), cell ensembles and brain regions.
Claim 77review scope statementsupports2022Source 27needs review

The review covers novel approaches that allow manipulation and imaging of specific molecular mechanisms in specific cells, cell ensembles, and brain regions.

Here, we will review novel approaches that allow the manipulation and imaging of specific molecular mechanisms in specific cells (not just neurons), cell ensembles and brain regions.
Claim 78review scope summarysupports2022Source 1needs review

Functionally precise mapping of the mammalian brain requires tracing neural circuits, monitoring their activity patterns, and manipulating their activity to infer function.

Claim 79review scope summarysupports2022Source 9needs review

Multimodal neuroimaging that combines fMRI with calcium imaging, optogenetics, electrophysiology, or chemogenetics offers an opportunity to better understand brain function.

Claim 80review scope summarysupports2022Source 23needs review

The review synthesizes evidence that newly developed genetic and viral tools together with optogenetic and chemogenetic techniques have enabled more detailed circuit-level analysis of anxiety and fear.

Newly developed genetic and viral tools and optogenetic and chemogenetic techniques have revealed the intricacies of neural circuits underlying anxiety and fear
Claim 81use case summarysupports2022Source 1needs review

Calcium indicators, voltage indicators, and neurotransmitter or neuropeptide biosensors are being used to investigate circuit architecture and function.

Claim 82use case summarysupports2022Source 8needs review

Engineered receptors can be used to dissect the function of one receptor member within a highly homologous receptor family in a cell-specific manner.

The engineered receptor dissects the function of one receptor member among a highly homologous receptor family in a cell-specific manner.
Claim 83use case summarysupports2022Source 8needs review

Engineered receptors can be used to dissect the function of one receptor member within a highly homologous receptor family in a cell-specific manner.

The engineered receptor dissects the function of one receptor member among a highly homologous receptor family in a cell-specific manner.
Claim 84use case summarysupports2022Source 8needs review

Engineered receptors can be used to dissect the function of one receptor member within a highly homologous receptor family in a cell-specific manner.

The engineered receptor dissects the function of one receptor member among a highly homologous receptor family in a cell-specific manner.
Claim 85use case summarysupports2022Source 8needs review

Engineered receptors can be used to dissect the function of one receptor member within a highly homologous receptor family in a cell-specific manner.

The engineered receptor dissects the function of one receptor member among a highly homologous receptor family in a cell-specific manner.
Claim 86use case summarysupports2022Source 8needs review

Engineered receptors can be used to dissect the function of one receptor member within a highly homologous receptor family in a cell-specific manner.

The engineered receptor dissects the function of one receptor member among a highly homologous receptor family in a cell-specific manner.
Claim 87use case summarysupports2022Source 8needs review

Engineered receptors can be used to dissect the function of one receptor member within a highly homologous receptor family in a cell-specific manner.

The engineered receptor dissects the function of one receptor member among a highly homologous receptor family in a cell-specific manner.
Claim 88use case summarysupports2022Source 8needs review

Engineered receptors can be used to dissect the function of one receptor member within a highly homologous receptor family in a cell-specific manner.

The engineered receptor dissects the function of one receptor member among a highly homologous receptor family in a cell-specific manner.
Claim 89use case summarysupports2022Source 1needs review

Genetically targeted cellular ablation, optogenetics, chemogenetics, and over-expression of ion channels are methods for acute or chronic manipulation of neural activity.

Claim 90advantage over prior methodssupports2021Source 22needs review

Conventional microtubule-targeting agents are insufficient to dissect dynamic mechanisms of specific microtubule populations because their effects are slow and act on the entire microtubule pool in cells.

MT-targeting agents, which, however, are insufficient to dissect the dynamic mechanisms of specific MT populations due to their slow effects on the entire pool of MTs in cells
Claim 91advantage over prior methodssupports2021Source 22needs review

Conventional microtubule-targeting agents are insufficient to dissect dynamic mechanisms of specific microtubule populations because their effects are slow and act on the entire microtubule pool in cells.

MT-targeting agents, which, however, are insufficient to dissect the dynamic mechanisms of specific MT populations due to their slow effects on the entire pool of MTs in cells
Claim 92advantage over prior methodssupports2021Source 22needs review

Conventional microtubule-targeting agents are insufficient to dissect dynamic mechanisms of specific microtubule populations because their effects are slow and act on the entire microtubule pool in cells.

MT-targeting agents, which, however, are insufficient to dissect the dynamic mechanisms of specific MT populations due to their slow effects on the entire pool of MTs in cells
Claim 93advantage over prior methodssupports2021Source 22needs review

Conventional microtubule-targeting agents are insufficient to dissect dynamic mechanisms of specific microtubule populations because their effects are slow and act on the entire microtubule pool in cells.

MT-targeting agents, which, however, are insufficient to dissect the dynamic mechanisms of specific MT populations due to their slow effects on the entire pool of MTs in cells
Claim 94advantage over prior methodssupports2021Source 22needs review

Conventional microtubule-targeting agents are insufficient to dissect dynamic mechanisms of specific microtubule populations because their effects are slow and act on the entire microtubule pool in cells.

MT-targeting agents, which, however, are insufficient to dissect the dynamic mechanisms of specific MT populations due to their slow effects on the entire pool of MTs in cells
Claim 95advantage over prior methodssupports2021Source 22needs review

Conventional microtubule-targeting agents are insufficient to dissect dynamic mechanisms of specific microtubule populations because their effects are slow and act on the entire microtubule pool in cells.

MT-targeting agents, which, however, are insufficient to dissect the dynamic mechanisms of specific MT populations due to their slow effects on the entire pool of MTs in cells
Claim 96advantage over prior methodssupports2021Source 22needs review

Conventional microtubule-targeting agents are insufficient to dissect dynamic mechanisms of specific microtubule populations because their effects are slow and act on the entire microtubule pool in cells.

MT-targeting agents, which, however, are insufficient to dissect the dynamic mechanisms of specific MT populations due to their slow effects on the entire pool of MTs in cells
Claim 97capabilitysupports2021Source 22needs review

Chemogenetic and optogenetic recruitment of engineered MT-cleaving enzymes can disassemble specific microtubule subtypes.

we have used chemogenetics and optogenetics to disassemble specific MT subtypes by rapid recruitment of engineered MT-cleaving enzymes
Claim 98capabilitysupports2021Source 22needs review

Chemogenetic and optogenetic recruitment of engineered MT-cleaving enzymes can disassemble specific microtubule subtypes.

we have used chemogenetics and optogenetics to disassemble specific MT subtypes by rapid recruitment of engineered MT-cleaving enzymes
Claim 99capabilitysupports2021Source 22needs review

Chemogenetic and optogenetic recruitment of engineered MT-cleaving enzymes can disassemble specific microtubule subtypes.

we have used chemogenetics and optogenetics to disassemble specific MT subtypes by rapid recruitment of engineered MT-cleaving enzymes
Claim 100capabilitysupports2021Source 22needs review

Chemogenetic and optogenetic recruitment of engineered MT-cleaving enzymes can disassemble specific microtubule subtypes.

we have used chemogenetics and optogenetics to disassemble specific MT subtypes by rapid recruitment of engineered MT-cleaving enzymes
Claim 101capabilitysupports2021Source 22needs review

Chemogenetic and optogenetic recruitment of engineered MT-cleaving enzymes can disassemble specific microtubule subtypes.

we have used chemogenetics and optogenetics to disassemble specific MT subtypes by rapid recruitment of engineered MT-cleaving enzymes
Claim 102capabilitysupports2021Source 22needs review

Chemogenetic and optogenetic recruitment of engineered MT-cleaving enzymes can disassemble specific microtubule subtypes.

we have used chemogenetics and optogenetics to disassemble specific MT subtypes by rapid recruitment of engineered MT-cleaving enzymes
Claim 103capabilitysupports2021Source 22needs review

Chemogenetic and optogenetic recruitment of engineered MT-cleaving enzymes can disassemble specific microtubule subtypes.

we have used chemogenetics and optogenetics to disassemble specific MT subtypes by rapid recruitment of engineered MT-cleaving enzymes
Claim 104design prioritysupports2021Source 14needs review

Creating gene vectors tailored for different situations is key to expanding gene therapy for epilepsy.

Claim 105emerging modality summarysupports2021Source 14needs review

Optogenetics, chemogenetics, and genome-editing tools are emerging approaches that may further advance epilepsy gene therapy.

Claim 106functional effectsupports2021Source 22needs review

Acute microtubule disassembly swiftly halted vesicular trafficking and lysosome dynamics.

Acute MT disassembly swiftly halted vesicular trafficking and lysosome dynamics.
Claim 107functional effectsupports2021Source 22needs review

Acute microtubule disassembly swiftly halted vesicular trafficking and lysosome dynamics.

Acute MT disassembly swiftly halted vesicular trafficking and lysosome dynamics.
Claim 108functional effectsupports2021Source 22needs review

Acute microtubule disassembly swiftly halted vesicular trafficking and lysosome dynamics.

Acute MT disassembly swiftly halted vesicular trafficking and lysosome dynamics.
Claim 109functional effectsupports2021Source 22needs review

Acute microtubule disassembly swiftly halted vesicular trafficking and lysosome dynamics.

Acute MT disassembly swiftly halted vesicular trafficking and lysosome dynamics.
Claim 110functional effectsupports2021Source 22needs review

Acute microtubule disassembly swiftly halted vesicular trafficking and lysosome dynamics.

Acute MT disassembly swiftly halted vesicular trafficking and lysosome dynamics.
Claim 111functional effectsupports2021Source 22needs review

Acute microtubule disassembly swiftly halted vesicular trafficking and lysosome dynamics.

Acute MT disassembly swiftly halted vesicular trafficking and lysosome dynamics.
Claim 112functional effectsupports2021Source 22needs review

Acute microtubule disassembly swiftly halted vesicular trafficking and lysosome dynamics.

Acute MT disassembly swiftly halted vesicular trafficking and lysosome dynamics.
Claim 113method comparisonsupports2021Source 26needs review

Transcriptome analysis has expanded understanding of genetic control behind long-term memory beyond more specific candidate screens.

From screenings of more or less specific candidates to broader studies based on transcriptome analysis, our understanding of the genetic control behind LTM has expanded exponentially in the past years.
Claim 114method scopesupports2021Source 26needs review

Chemogenetics, thermogenetics, and optogenetics are described as technical approaches enabling precise control of gene expression and neural manipulation in Drosophila.

This is possible thanks to sophisticated technical approaches that enable precise control of gene expression in the fruit fly as well as neural manipulation, like chemogenetics, thermogenetics, or optogenetics.
Claim 115preclinical strategy summarysupports2021Source 14needs review

Strategies including inhibitory neuropeptide overexpression and modulation of neurotransmitter or ion-channel expression have been tested in animal models of epilepsy.

Claim 116reversibilitysupports2021Source 22needs review

The induced effects were rapidly reversible by inhibiting cleaving-enzyme activity or microtubule association.

These effects were rapidly reversed by inhibiting the activity or MT association of the cleaving enzymes.
Claim 117reversibilitysupports2021Source 22needs review

The induced effects were rapidly reversible by inhibiting cleaving-enzyme activity or microtubule association.

These effects were rapidly reversed by inhibiting the activity or MT association of the cleaving enzymes.
Claim 118reversibilitysupports2021Source 22needs review

The induced effects were rapidly reversible by inhibiting cleaving-enzyme activity or microtubule association.

These effects were rapidly reversed by inhibiting the activity or MT association of the cleaving enzymes.
Claim 119reversibilitysupports2021Source 22needs review

The induced effects were rapidly reversible by inhibiting cleaving-enzyme activity or microtubule association.

These effects were rapidly reversed by inhibiting the activity or MT association of the cleaving enzymes.
Claim 120reversibilitysupports2021Source 22needs review

The induced effects were rapidly reversible by inhibiting cleaving-enzyme activity or microtubule association.

These effects were rapidly reversed by inhibiting the activity or MT association of the cleaving enzymes.
Claim 121reversibilitysupports2021Source 22needs review

The induced effects were rapidly reversible by inhibiting cleaving-enzyme activity or microtubule association.

These effects were rapidly reversed by inhibiting the activity or MT association of the cleaving enzymes.
Claim 122reversibilitysupports2021Source 22needs review

The induced effects were rapidly reversible by inhibiting cleaving-enzyme activity or microtubule association.

These effects were rapidly reversed by inhibiting the activity or MT association of the cleaving enzymes.
Claim 123target scopesupports2021Source 22needs review

The approach was used to disassemble tyrosinated microtubules and microtubule-based structures including primary cilia, mitotic spindles, and intercellular bridges.

We also used this approach to disassemble MTs specifically modified by tyrosination and several MT-based structures including primary cilia, mitotic spindles, and intercellular bridges.
Claim 124target scopesupports2021Source 22needs review

The approach was used to disassemble tyrosinated microtubules and microtubule-based structures including primary cilia, mitotic spindles, and intercellular bridges.

We also used this approach to disassemble MTs specifically modified by tyrosination and several MT-based structures including primary cilia, mitotic spindles, and intercellular bridges.
Claim 125target scopesupports2021Source 22needs review

The approach was used to disassemble tyrosinated microtubules and microtubule-based structures including primary cilia, mitotic spindles, and intercellular bridges.

We also used this approach to disassemble MTs specifically modified by tyrosination and several MT-based structures including primary cilia, mitotic spindles, and intercellular bridges.
Claim 126target scopesupports2021Source 22needs review

The approach was used to disassemble tyrosinated microtubules and microtubule-based structures including primary cilia, mitotic spindles, and intercellular bridges.

We also used this approach to disassemble MTs specifically modified by tyrosination and several MT-based structures including primary cilia, mitotic spindles, and intercellular bridges.
Claim 127target scopesupports2021Source 22needs review

The approach was used to disassemble tyrosinated microtubules and microtubule-based structures including primary cilia, mitotic spindles, and intercellular bridges.

We also used this approach to disassemble MTs specifically modified by tyrosination and several MT-based structures including primary cilia, mitotic spindles, and intercellular bridges.
Claim 128target scopesupports2021Source 22needs review

The approach was used to disassemble tyrosinated microtubules and microtubule-based structures including primary cilia, mitotic spindles, and intercellular bridges.

We also used this approach to disassemble MTs specifically modified by tyrosination and several MT-based structures including primary cilia, mitotic spindles, and intercellular bridges.
Claim 129target scopesupports2021Source 22needs review

The approach was used to disassemble tyrosinated microtubules and microtubule-based structures including primary cilia, mitotic spindles, and intercellular bridges.

We also used this approach to disassemble MTs specifically modified by tyrosination and several MT-based structures including primary cilia, mitotic spindles, and intercellular bridges.
Claim 130therapeutic discovery rationalesupports2021Source 3needs review

Understanding the characteristics and mechanisms of stress-related neurocircuits is framed as critical for discovering novel therapeutic strategies for stress-induced mental disorders.

Claim 131tool utility summarysupports2021Source 3needs review

Optogenetics and chemogenetics are described as powerful tools that have accelerated progress in revealing critical neural circuits regulating the pathogenesis of stress-induced disorders.

Claim 132method use summarysupports2020Source 7needs review

Optogenetics, chemogenetics, and imaging tools are used for functional dissection of sub-neocortical brain circuits in rodent pain models.

Claim 133review summarysupports2020Source 18needs review

Chemogenetic and optogenetic methods provide powerful tools to study how grafted neurons affect host brain function.

Claim 134review summarysupports2020Source 18needs review

Early rodent studies reported that neuroblasts from striatal primordia or fetal ventral mesencephalon could integrate anatomically and functionally into lesioned striatal and nigral circuitry, establish host connections, and reverse lesion-induced behavioral impairments.

Claim 135review summarysupports2020Source 18needs review

Recent progress indicates that pluripotent stem cell-derived striatal and nigral progenitors can survive and mature in lesioned brain and re-establish afferent and efferent axonal connectivity with notable specificity.

Claim 136review summarysupports2020Source 18needs review

Successful repair of brain circuitry by new neurons depends on their ability to re-establish afferent and efferent connections with the host.

Claim 137behavioral domain sensitivitysupports2019Source 24needs review

Patience and cognitive flexibility appear sensitive to fluctuations in 5-HT neuronal excitability.

Domains that appear sensitive to fluctuations in 5-HT neuronal excitability include patience and cognitive flexibility.
Claim 138research impactsupports2019Source 19needs review

Application of optogenetics and chemogenetics to sleep and circadian research has unveiled neuronal populations involved in sleep-wake control and enabled interrogation of the coordinating circuitry.

Application of these techniques to sleep and circadian research has resulted in the unveiling of several neuronal populations that are involved in sleep-wake control, and allowed a comprehensive interrogation of the circuitry through which these nodes are coordinated to orchestrate the sleep-wake cycle.
Claim 139review summarysupports2019Source 24needs review

Optogenetic and chemogenetic manipulation of dorsal raphe 5-HT neurons indicates that serotonin has a greater impact on executive function than previously appreciated.

Optogenetic and chemogenetic manipulations of dorsal raphe 5-HT neurons reveal that serotonin has a greater impact on executive function than previously appreciated.
Claim 140tool capabilitysupports2019Source 19needs review

Optogenetics and chemogenetics allow specific activation or inhibition of targeted neuronal subpopulations.

Optogenetics and chemogenetics are powerful tools, allowing the specific activation or inhibition of targeted neuronal subpopulations.
Claim 141translational outlooksupports2019Source 19needs review

Development of chemogenetics as a therapeutic strategy is underway and may enable more focused and less invasive therapies for sleep-wake disorders and related comorbidities.

Intriguingly, the development of chemogenetics as a therapeutic strategy is now well underway and such an approach has the capacity to lead to more focused and less invasive therapies for treating sleep-wake disorders and related comorbidities.
Claim 142causal interventionsupports2018Source 10needs review

Chemogenetic and optogenetic manipulations of ventral tegmental area dopamine or GABA neurons establish a causal link to heroin reinforcement.

Chemogenetic and optogenetic manipulations of VTA DA or GABA neurons establish a causal link to heroin reinforcement.
Claim 143functional effectsupports2018Source 10needs review

Inhibition of ventral tegmental area dopamine neurons blocks heroin self-administration.

Inhibition of DA neurons blocked heroin self-administration
Claim 144future directionsupports2018Source 12needs review

Optogenetics, chemogenetics, and genome-editing technology were presented as potential future gene-therapy modalities for Parkinson's disease.

Claim 145mechanistic findingsupports2018Source 10needs review

Heroin activates dopamine neurons in the medial ventral tegmental area that preferentially project to the medial shell of the nucleus accumbens.

Here, we monitor genetically encoded DA and calcium indicators as well as cFos in mice to reveal that heroin activates DA neurons located in the medial part of the VTA, preferentially projecting to the medial shell of the nucleus accumbens (NAc).
Claim 146review scopesupports2018Source 29needs review

This review covers the use of optogenetic and chemogenetic circuit interrogation in animal models of depression.

Claim 147review scopesupports2018Source 29needs review

This review covers the use of optogenetic and chemogenetic circuit interrogation in animal models of depression.

Claim 148review scopesupports2018Source 29needs review

This review covers the use of optogenetic and chemogenetic circuit interrogation in animal models of depression.

Claim 149review scopesupports2018Source 29needs review

This review covers the use of optogenetic and chemogenetic circuit interrogation in animal models of depression.

Claim 150review scopesupports2018Source 29needs review

This review covers the use of optogenetic and chemogenetic circuit interrogation in animal models of depression.

Claim 151review scopesupports2018Source 29needs review

This review covers the use of optogenetic and chemogenetic circuit interrogation in animal models of depression.

Claim 152review summarysupports2018Source 20needs review

Recent advances in optical imaging, optogenetics, and chemogenetics have made it feasible to record and alter neuronal activity with single neuron resolution and genetically directed targeting.

Recent advances in optical imaging, optogenetics, and chemogenetics have made it feasible to record and alter neuronal activity with single neuron resolution and genetically directed targeting.
Claim 153translational pathwaysupports2018Source 20needs review

The review proposes a translational pathway by which mechanistic studies using these research tools could result in novel clinical therapies.

The goal of this review it to summarize the usage of these research tools in the study of ictogenesis (seizure generation) and propose a translational pathway by which these studies could result in novel clinical therapies.
Claim 154application scopesupports2017Source 4needs review

The review discusses applications of optogenetics and chemogenetics to epilepsy and compares their strengths and weaknesses for preclinical and translational applications.

In this review, examples of the application of optogenetics and chemogenetics to epilepsy are raised, the comparative strengths and weaknesses of these approaches are discussed for both preclinical and translational applications...
Claim 155capabilitysupports2017Source 17needs review

Genetically modified viral vectors broaden the ability to express genes of interest and support inducible manipulations in neural systems.

Claim 156capability summarysupports2017Source 4needs review

Optogenetic and chemogenetic tools have enabled previously impossible levels of functional circuit mapping in neuroscience.

Over the past decade, optogenetic and chemogenetic tools have enabled previously impossible levels of functional circuit mapping in neuroscience.
Claim 157comparative advantagesupports2017Source 17needs review

Chemogenetics can be activated via a systemic drug without indwelling fiber optics and acts in a more naturalistic modulatory fashion through second-messenger pathways than optogenetics.

Claim 158conceptual rationalesupports2017Source 4needs review

Understanding seizure-circuit architecture at local microcircuit and distributed macrocircuit levels may provide new therapeutic avenues for epilepsy.

Understanding the network architecture at the level of both local microcircuits and distributed macrocircuits may provide new therapeutic avenues for the treatment of epilepsy.
Claim 159field impactsupports2017Source 17needs review

Optogenetic and chemogenetic approaches allow mechanistic, temporally specific, cell-type-specific, and circuit-specific neural regulation of behaviors.

Claim 160method rolesupports2017Source 2needs review

Optogenetic and chemogenetic methods are discussed as approaches for causal interrogation or suppression of pain circuits.

Claim 161method rolesupports2017Source 2needs review

Single-cell RNA-seq is discussed as a method for classifying nociceptor and somatosensory neuron types and for studying injury responses relevant to neuropathic pain.

Claim 162review scopesupports2017Source 2needs review

This review covers mechanistic advances in nociception and neuropathic pain enabled by optogenetics, RNA-sequencing, animal models, and human genetics.

Claim 163review summarysupports2017Source 5needs review

Past difficulty manipulating astrocytes in a cell type-specific and non-invasive manner contributed to controversies in the field.

Claim 164tool statussupports2017Source 17needs review

DREADD technology is presented as the most robust model of chemogenetics.

Claim 165use casesupports2017Source 5needs review

Optogenetics and chemogenetics are advanced tools that may further illuminate the role of astrocytes in memory processes.

Approval Evidence

29 sources65 linked approval claimsfirst-pass slug chemogenetics
This review systematically summarizes the evolution of calcium indicators and their integration with behavioral paradigms, electrophysiology, optogenetics, and chemogenetics to elucidate cellular and circuit mechanisms underlying depression.

Source:

The review incorporates data from both preclinical and clinical studies covering... chemogenetics... Genetic tools offer cell-type precision in experimental systems but face translational barriers related to delivery and safety.

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Optogenetics and chemogenetics are emerging neuromodulation techniques... These techniques enable the precise control of specific neuronal types and neural circuits, allowing researchers to investigate the cellular mechanisms underlying depression.

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Recent advances in spatial transcriptomics, single-nucleus RNA sequencing, chemogenetics, and optogenetics are discussed as transformative tools for mapping and manipulating VOR-expressing circuits.

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This review examines various gene therapy strategies, including ASOs, small interfering RNA (siRNAs), optogenetics, chemogenetics, and CRISPR...

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selected studies taking advantage of advanced state-of-the-art molecular genetic methods ranging from genome-wide epi/transcriptome mapping and variant scanning to optogenetics and chemogenetics

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many studies have used state-of-the-art tools such as chemogenetic ... to investigate the role of specific cell subtypes in the stress response

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Finally, it discusses methods for acute or chronic manipulation of neural activity, including ... chemogenetics

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As the alternative, chemogenetics has been proposed, in which target proteins are genetically engineered to interact with a designed chemical partner with high selectivity.

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Being able to combine calcium imaging, optogenetics, electrophysiology, chemogenetics, and functional magnetic resonance imaging (fMRI) as part of the numerous efforts on brain functional mapping, we have a unique opportunity to better understand brain function.

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Newly developed genetic and viral tools and optogenetic and chemogenetic techniques have revealed the intricacies of neural circuits underlying anxiety and fear

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With a combination of chemo- and opto-genetics

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capabilitysupports

Optogenetics and chemogenetics enable precise control of specific neuronal types and neural circuits for investigating cellular mechanisms underlying depression.

These techniques enable the precise control of specific neuronal types and neural circuits, allowing researchers to investigate the cellular mechanisms underlying depression.

Source:

capability summarysupports

Optogenetics and chemogenetics enable precise control of specific neuronal types and neural circuits for investigating cellular mechanisms underlying depression.

Source:

comparative review scopesupports

The review comparatively analyzes biophysical, genetic, and biological neuromodulation approaches with emphasis on molecular targets and translational potential.

Source:

evaluation axessupports

The reviewed neuromodulation methods were assessed based on specificity, safety, reversibility, and mechanistic clarity.

Source:

field gapsupports

A critical gap in commonly used neuromodulation methods is incomplete mechanistic understanding, and identifying molecular targets may improve therapeutic precision.

Source:

multimodal integrationsupports

The review summarizes integration of calcium indicators with behavioral paradigms, electrophysiology, optogenetics, and chemogenetics to elucidate cellular and circuit mechanisms underlying depression.

Source:

precision vs translation tradeoffsupports

Genetic neuromodulation tools offer cell-type precision in experimental systems but face translational barriers related to delivery and safety.

Source:

relationshipsupports

Sonogenetics and odourgenetics are described as developed based on optogenetics and chemogenetics.

describes the current state of research on sonogenetics and odourgenetics developed based on optogenetics and chemogenetics

Source:

research impactsupports

Advances in optogenetics and chemogenetics have significantly contributed to understanding neural circuits involved in depression.

The advancement in these techniques has significantly contributed to the understanding of the neural circuits involved in depression

Source:

review summarysupports

Advances in optogenetics and chemogenetics have significantly contributed to understanding neural circuits involved in depression.

Source:

scopesupports

The review covers applications of optogenetics and chemogenetics in depression-related rodent brain regions including the ventral tegmental area, nucleus accumbens, prefrontal cortex, hippocampus, dorsal raphe nucleus, and lateral habenula.

This review primarily focuses on the application of optogenetics and chemogenetics in several brain regions closely associated with depressive-like behaviors in rodent models, such as the ventral tegmental area, nucleus accumbens, prefrontal cortex, hippocampus, dorsal raphe nucleus, and lateral habenula

Source:

tooling summarysupports

Spatial transcriptomics, single-nucleus RNA sequencing, chemogenetics, and optogenetics are described as transformative tools for mapping and manipulating VOR-expressing circuits.

Source:

translational potentialsupports

Optogenetics and chemogenetics have provided theoretical support for the development of novel antidepressants.

Additionally, these techniques have provided theoretical support for the development of novel antidepressants.

Source:

translational potentialsupports

When combined with other emerging technologies, optogenetics and chemogenetics provide novel therapeutic targets and diagnostic tools for clinical treatment of depression.

Source:

translational potentialsupports

When combined with other emerging technologies, optogenetics and chemogenetics provide novel therapeutic targets and diagnostic tools for the clinical treatment of depression.

when combined with other emerging technologies, they provide novel therapeutic targets and diagnostic tools for the clinical treatment of depression.

Source:

scope of reviewsupports

The review covers ASOs, siRNAs, optogenetics, chemogenetics, CRISPR, and their delivery methods targeting primary sensory neurons and non-neuronal cells including glia and chondrocytes.

Source:

translational landscapesupports

Although gene therapy-based clinical trials have increased, trials focused on pain as the primary outcome remain uncommon.

Source:

mechanistic scopesupports

The review emphasizes that emotional stress acting through defined brain regions strongly influences viral and cardiovascular disorders.

This latter line of investigation emphasizes the strength of influence of emotional stress-acting through defined brain regions-upon viral and cardiovascular disorders.

Source:

organ system interaction summarysupports

The review states that newly identified immunological interactions at organ and system levels affect cardiovascular pathogenesis, including intestinal-system influences moving toward therapeutic exploitation.

Second, we consider newly identified immunological interactions at organ and system levels which affect cardiovascular pathogenesis. Thus, studies into immune influences arising from the intestinal system are moving towards therapeutic exploitation.

Source:

review scope summarysupports

The review focuses on selected cardiovascular immunology studies that use advanced molecular-genetic methods including genome-wide epi/transcriptome mapping, variant scanning, optogenetics, and chemogenetics.

Here, we specifically focus on selected studies taking advantage of advanced state-of-the-art molecular genetic methods ranging from genome-wide epi/transcriptome mapping and variant scanning to optogenetics and chemogenetics.

Source:

Comparisons

Source-stated alternatives

The review names optogenetics as another manipulation approach and spatial transcriptomics or snRNA-seq as non-perturbative mapping approaches.; The review discusses chemogenetics alongside optogenetics and mentions sonogenetics and odourgenetics as related approaches developed from these tool classes.; The abstract discusses optogenetics alongside chemogenetics and mentions sonogenetics and odourgenetics as related approaches developed from them.; The review contrasts chemogenetics with optogenetics, magnetogenetics, biophysical methods, and toxin-based neuromodulation.; Other integrated approaches named are electrophysiology, optogenetics, and behavioral paradigms.; The review discusses optogenetics, CRISPR, ASOs, RNAi, siRNAs, and virus-based delivery systems as related approaches.; The abstract directly lists optogenetic, genetic manipulation, electrophysiology, pharmacology, and immunohistochemistry as nearby approaches used for related questions.; Optogenetics is the explicitly named alternative in the abstract.; The abstract explicitly mentions optogenetic techniques as a related alternative circuit-dissection approach.; The abstract contrasts chemogenetics with optogenetics as a perturbation approach and with calcium imaging or electrophysiology as readout approaches.; The abstract lists optogenetics, genetically targeted cellular ablation, and over-expression of ion channels as alternative manipulation approaches.; The abstract directly contrasts chemogenetics with thermogenetics and optogenetics as related manipulation approaches.; The abstract contrasts it with optogenetics, genome-editing tools, and expression-modulation strategies.; Optogenetics is explicitly named as a parallel tool for revealing stress-related neurocircuits.; The review contrasts this with traditional exogenous sensory-motor stimulation protocols and also mentions optogenetics and automated real-time sleep-scoring algorithms.; The review mentions optogenetics and genetic or virus-based connectomics as nearby complementary approaches.; The abstract places chemogenetics alongside optogenetics and imaging as related approaches for circuit-level investigation.; The abstract directly names optogenetic manipulations as a nearby alternative approach.; Optogenetics is the main contrasted alternative named in the abstract, serving a similar circuit-interrogation role.; The abstract explicitly contrasts chemogenetics with optogenetics and optical imaging as related approaches.; The paper explicitly contrasts chemogenetics with optogenetics.; Optogenetics is explicitly named as a parallel advanced tool for illuminating astrocyte roles in memory.; Optogenetic methods are the main contrasted approach in the review.; The supplied summary places chemogenetics alongside optogenetics and RNA-sequencing as related approaches.

Source:

The review names optogenetics as another manipulation approach and spatial transcriptomics or snRNA-seq as non-perturbative mapping approaches.

Source:

The review discusses chemogenetics alongside optogenetics and mentions sonogenetics and odourgenetics as related approaches developed from these tool classes.

Source:

The abstract discusses optogenetics alongside chemogenetics and mentions sonogenetics and odourgenetics as related approaches developed from them.

Source:

The review contrasts chemogenetics with optogenetics, magnetogenetics, biophysical methods, and toxin-based neuromodulation.

Source:

Other integrated approaches named are electrophysiology, optogenetics, and behavioral paradigms.

Source:

The review discusses optogenetics, CRISPR, ASOs, RNAi, siRNAs, and virus-based delivery systems as related approaches.

Source:

The abstract directly lists optogenetic, genetic manipulation, electrophysiology, pharmacology, and immunohistochemistry as nearby approaches used for related questions.

Source:

Optogenetics is the explicitly named alternative in the abstract.

Source:

The abstract explicitly mentions optogenetic techniques as a related alternative circuit-dissection approach.

Source:

The abstract contrasts chemogenetics with optogenetics as a perturbation approach and with calcium imaging or electrophysiology as readout approaches.

Source:

The abstract lists optogenetics, genetically targeted cellular ablation, and over-expression of ion channels as alternative manipulation approaches.

Source:

The abstract directly contrasts chemogenetics with thermogenetics and optogenetics as related manipulation approaches.

Source:

The abstract contrasts it with optogenetics, genome-editing tools, and expression-modulation strategies.

Source:

Optogenetics is explicitly named as a parallel tool for revealing stress-related neurocircuits.

Source:

The review contrasts this with traditional exogenous sensory-motor stimulation protocols and also mentions optogenetics and automated real-time sleep-scoring algorithms.

Source:

The review mentions optogenetics and genetic or virus-based connectomics as nearby complementary approaches.

Source:

The abstract places chemogenetics alongside optogenetics and imaging as related approaches for circuit-level investigation.

Source:

The abstract directly names optogenetic manipulations as a nearby alternative approach.

Source:

Optogenetics is the main contrasted alternative named in the abstract, serving a similar circuit-interrogation role.

Source:

The abstract explicitly contrasts chemogenetics with optogenetics and optical imaging as related approaches.

Source:

The paper explicitly contrasts chemogenetics with optogenetics.

Source:

Optogenetics is explicitly named as a parallel advanced tool for illuminating astrocyte roles in memory.

Source:

Optogenetic methods are the main contrasted approach in the review.

Source:

The supplied summary places chemogenetics alongside optogenetics and RNA-sequencing as related approaches.

Source-backed strengths

The main supported strength is high selectivity, because the target protein is engineered to interact with a designed chemical partner. The literature further supports versatility across contexts, including cell-surface receptor control, living-cell microtubule perturbation, and use in circuit interrogation studies together with optogenetics.

Source:

MT-targeting agents, which, however, are insufficient to dissect the dynamic mechanisms of specific MT populations due to their slow effects on the entire pool of MTs in cells

The review discusses optogenetics, CRISPR, ASOs, RNAi, siRNAs, and virus-based delivery systems as related approaches.

Shared frame: source-stated alternative in extracted literature

Strengths here: described as a transformative tool for manipulating circuits; precise control of specific neuronal types and neural circuits; has significantly contributed to understanding neural circuits involved in depression.

Relative tradeoffs: the abstract does not specify construct types, delivery methods, or temporal precision; the review discusses potential and challenges of chemogenetics in future research, but the abstract does not specify them; the review discusses potential and challenges of chemogenetics in future research.

Source:

The review discusses optogenetics, CRISPR, ASOs, RNAi, siRNAs, and virus-based delivery systems as related approaches.

The review discusses optogenetics, CRISPR, ASOs, RNAi, siRNAs, and virus-based delivery systems as related approaches.

Shared frame: source-stated alternative in extracted literature

Strengths here: described as a transformative tool for manipulating circuits; precise control of specific neuronal types and neural circuits; has significantly contributed to understanding neural circuits involved in depression.

Relative tradeoffs: the abstract does not specify construct types, delivery methods, or temporal precision; the review discusses potential and challenges of chemogenetics in future research, but the abstract does not specify them; the review discusses potential and challenges of chemogenetics in future research.

Source:

The review discusses optogenetics, CRISPR, ASOs, RNAi, siRNAs, and virus-based delivery systems as related approaches.

The review discusses optogenetics, CRISPR, ASOs, RNAi, siRNAs, and virus-based delivery systems as related approaches.

Shared frame: source-stated alternative in extracted literature

Strengths here: described as a transformative tool for manipulating circuits; precise control of specific neuronal types and neural circuits; has significantly contributed to understanding neural circuits involved in depression.

Relative tradeoffs: the abstract does not specify construct types, delivery methods, or temporal precision; the review discusses potential and challenges of chemogenetics in future research, but the abstract does not specify them; the review discusses potential and challenges of chemogenetics in future research.

Source:

The review discusses optogenetics, CRISPR, ASOs, RNAi, siRNAs, and virus-based delivery systems as related approaches.

Compared with Ca2+ imaging

The abstract contrasts chemogenetics with optogenetics as a perturbation approach and with calcium imaging or electrophysiology as readout approaches.

Shared frame: source-stated alternative in extracted literature

Strengths here: described as a transformative tool for manipulating circuits; precise control of specific neuronal types and neural circuits; has significantly contributed to understanding neural circuits involved in depression.

Relative tradeoffs: the abstract does not specify construct types, delivery methods, or temporal precision; the review discusses potential and challenges of chemogenetics in future research, but the abstract does not specify them; the review discusses potential and challenges of chemogenetics in future research.

Source:

The abstract contrasts chemogenetics with optogenetics as a perturbation approach and with calcium imaging or electrophysiology as readout approaches.

Compared with calcium imaging

The abstract contrasts chemogenetics with optogenetics as a perturbation approach and with calcium imaging or electrophysiology as readout approaches.

Shared frame: source-stated alternative in extracted literature

Strengths here: described as a transformative tool for manipulating circuits; precise control of specific neuronal types and neural circuits; has significantly contributed to understanding neural circuits involved in depression.

Relative tradeoffs: the abstract does not specify construct types, delivery methods, or temporal precision; the review discusses potential and challenges of chemogenetics in future research, but the abstract does not specify them; the review discusses potential and challenges of chemogenetics in future research.

Source:

The abstract contrasts chemogenetics with optogenetics as a perturbation approach and with calcium imaging or electrophysiology as readout approaches.

The abstract contrasts chemogenetics with optogenetics as a perturbation approach and with calcium imaging or electrophysiology as readout approaches.

Shared frame: source-stated alternative in extracted literature

Strengths here: described as a transformative tool for manipulating circuits; precise control of specific neuronal types and neural circuits; has significantly contributed to understanding neural circuits involved in depression.

Relative tradeoffs: the abstract does not specify construct types, delivery methods, or temporal precision; the review discusses potential and challenges of chemogenetics in future research, but the abstract does not specify them; the review discusses potential and challenges of chemogenetics in future research.

Source:

The abstract contrasts chemogenetics with optogenetics as a perturbation approach and with calcium imaging or electrophysiology as readout approaches.

Compared with CRISPR/Cas9

The review discusses optogenetics, CRISPR, ASOs, RNAi, siRNAs, and virus-based delivery systems as related approaches.

Shared frame: source-stated alternative in extracted literature

Strengths here: described as a transformative tool for manipulating circuits; precise control of specific neuronal types and neural circuits; has significantly contributed to understanding neural circuits involved in depression.

Relative tradeoffs: the abstract does not specify construct types, delivery methods, or temporal precision; the review discusses potential and challenges of chemogenetics in future research, but the abstract does not specify them; the review discusses potential and challenges of chemogenetics in future research.

Source:

The review discusses optogenetics, CRISPR, ASOs, RNAi, siRNAs, and virus-based delivery systems as related approaches.

Compared with CRISPR/Cas9 system

The review discusses optogenetics, CRISPR, ASOs, RNAi, siRNAs, and virus-based delivery systems as related approaches.

Shared frame: source-stated alternative in extracted literature

Strengths here: described as a transformative tool for manipulating circuits; precise control of specific neuronal types and neural circuits; has significantly contributed to understanding neural circuits involved in depression.

Relative tradeoffs: the abstract does not specify construct types, delivery methods, or temporal precision; the review discusses potential and challenges of chemogenetics in future research, but the abstract does not specify them; the review discusses potential and challenges of chemogenetics in future research.

Source:

The review discusses optogenetics, CRISPR, ASOs, RNAi, siRNAs, and virus-based delivery systems as related approaches.

Compared with electrophysiology

Other integrated approaches named are electrophysiology, optogenetics, and behavioral paradigms.; The abstract directly lists optogenetic, genetic manipulation, electrophysiology, pharmacology, and immunohistochemistry as nearby approaches used for related questions.; The abstract contrasts chemogenetics with optogenetics as a perturbation approach and with calcium imaging or electrophysiology as readout approaches.

Shared frame: source-stated alternative in extracted literature

Strengths here: described as a transformative tool for manipulating circuits; precise control of specific neuronal types and neural circuits; has significantly contributed to understanding neural circuits involved in depression.

Relative tradeoffs: the abstract does not specify construct types, delivery methods, or temporal precision; the review discusses potential and challenges of chemogenetics in future research, but the abstract does not specify them; the review discusses potential and challenges of chemogenetics in future research.

Source:

Other integrated approaches named are electrophysiology, optogenetics, and behavioral paradigms.

Source:

The abstract directly lists optogenetic, genetic manipulation, electrophysiology, pharmacology, and immunohistochemistry as nearby approaches used for related questions.

Source:

The abstract contrasts chemogenetics with optogenetics as a perturbation approach and with calcium imaging or electrophysiology as readout approaches.

Compared with imaging

The abstract contrasts chemogenetics with optogenetics as a perturbation approach and with calcium imaging or electrophysiology as readout approaches.; The abstract places chemogenetics alongside optogenetics and imaging as related approaches for circuit-level investigation.; The abstract explicitly contrasts chemogenetics with optogenetics and optical imaging as related approaches.

Shared frame: source-stated alternative in extracted literature

Strengths here: described as a transformative tool for manipulating circuits; precise control of specific neuronal types and neural circuits; has significantly contributed to understanding neural circuits involved in depression.

Relative tradeoffs: the abstract does not specify construct types, delivery methods, or temporal precision; the review discusses potential and challenges of chemogenetics in future research, but the abstract does not specify them; the review discusses potential and challenges of chemogenetics in future research.

Source:

The abstract contrasts chemogenetics with optogenetics as a perturbation approach and with calcium imaging or electrophysiology as readout approaches.

Source:

The abstract places chemogenetics alongside optogenetics and imaging as related approaches for circuit-level investigation.

Source:

The abstract explicitly contrasts chemogenetics with optogenetics and optical imaging as related approaches.

Compared with imaging surveillance

The abstract contrasts chemogenetics with optogenetics as a perturbation approach and with calcium imaging or electrophysiology as readout approaches.; The abstract places chemogenetics alongside optogenetics and imaging as related approaches for circuit-level investigation.; The abstract explicitly contrasts chemogenetics with optogenetics and optical imaging as related approaches.

Shared frame: source-stated alternative in extracted literature

Strengths here: described as a transformative tool for manipulating circuits; precise control of specific neuronal types and neural circuits; has significantly contributed to understanding neural circuits involved in depression.

Relative tradeoffs: the abstract does not specify construct types, delivery methods, or temporal precision; the review discusses potential and challenges of chemogenetics in future research, but the abstract does not specify them; the review discusses potential and challenges of chemogenetics in future research.

Source:

The abstract contrasts chemogenetics with optogenetics as a perturbation approach and with calcium imaging or electrophysiology as readout approaches.

Source:

The abstract places chemogenetics alongside optogenetics and imaging as related approaches for circuit-level investigation.

Source:

The abstract explicitly contrasts chemogenetics with optogenetics and optical imaging as related approaches.

Compared with immunohistochemistry

The abstract directly lists optogenetic, genetic manipulation, electrophysiology, pharmacology, and immunohistochemistry as nearby approaches used for related questions.

Shared frame: source-stated alternative in extracted literature

Strengths here: described as a transformative tool for manipulating circuits; precise control of specific neuronal types and neural circuits; has significantly contributed to understanding neural circuits involved in depression.

Relative tradeoffs: the abstract does not specify construct types, delivery methods, or temporal precision; the review discusses potential and challenges of chemogenetics in future research, but the abstract does not specify them; the review discusses potential and challenges of chemogenetics in future research.

Source:

The abstract directly lists optogenetic, genetic manipulation, electrophysiology, pharmacology, and immunohistochemistry as nearby approaches used for related questions.

Compared with magnetogenetics

The review contrasts chemogenetics with optogenetics, magnetogenetics, biophysical methods, and toxin-based neuromodulation.

Shared frame: source-stated alternative in extracted literature

Strengths here: described as a transformative tool for manipulating circuits; precise control of specific neuronal types and neural circuits; has significantly contributed to understanding neural circuits involved in depression.

Relative tradeoffs: the abstract does not specify construct types, delivery methods, or temporal precision; the review discusses potential and challenges of chemogenetics in future research, but the abstract does not specify them; the review discusses potential and challenges of chemogenetics in future research.

Source:

The review contrasts chemogenetics with optogenetics, magnetogenetics, biophysical methods, and toxin-based neuromodulation.

The abstract explicitly contrasts chemogenetics with optogenetics and optical imaging as related approaches.

Shared frame: source-stated alternative in extracted literature

Strengths here: described as a transformative tool for manipulating circuits; precise control of specific neuronal types and neural circuits; has significantly contributed to understanding neural circuits involved in depression.

Relative tradeoffs: the abstract does not specify construct types, delivery methods, or temporal precision; the review discusses potential and challenges of chemogenetics in future research, but the abstract does not specify them; the review discusses potential and challenges of chemogenetics in future research.

Source:

The abstract explicitly contrasts chemogenetics with optogenetics and optical imaging as related approaches.

Compared with optogenetic

The abstract directly lists optogenetic, genetic manipulation, electrophysiology, pharmacology, and immunohistochemistry as nearby approaches used for related questions.; The abstract explicitly mentions optogenetic techniques as a related alternative circuit-dissection approach.; The abstract directly names optogenetic manipulations as a nearby alternative approach.; Optogenetic methods are the main contrasted approach in the review.

Shared frame: source-stated alternative in extracted literature

Strengths here: described as a transformative tool for manipulating circuits; precise control of specific neuronal types and neural circuits; has significantly contributed to understanding neural circuits involved in depression.

Relative tradeoffs: the abstract does not specify construct types, delivery methods, or temporal precision; the review discusses potential and challenges of chemogenetics in future research, but the abstract does not specify them; the review discusses potential and challenges of chemogenetics in future research.

Source:

The abstract directly lists optogenetic, genetic manipulation, electrophysiology, pharmacology, and immunohistochemistry as nearby approaches used for related questions.

Source:

The abstract explicitly mentions optogenetic techniques as a related alternative circuit-dissection approach.

Source:

The abstract directly names optogenetic manipulations as a nearby alternative approach.

Source:

Optogenetic methods are the main contrasted approach in the review.

The review names optogenetics as another manipulation approach and spatial transcriptomics or snRNA-seq as non-perturbative mapping approaches.; The review discusses chemogenetics alongside optogenetics and mentions sonogenetics and odourgenetics as related approaches developed from these tool classes.; The abstract discusses optogenetics alongside chemogenetics and mentions sonogenetics and odourgenetics as related approaches developed from them.; The review contrasts chemogenetics with optogenetics, magnetogenetics, biophysical methods, and toxin-based neuromodulation.; Other integrated approaches named are electrophysiology, optogenetics, and behavioral paradigms.; The review discusses optogenetics, CRISPR, ASOs, RNAi, siRNAs, and virus-based delivery systems as related approaches.; Optogenetics is the explicitly named alternative in the abstract.; The abstract contrasts chemogenetics with optogenetics as a perturbation approach and with calcium imaging or electrophysiology as readout approaches.; The abstract lists optogenetics, genetically targeted cellular ablation, and over-expression of ion channels as alternative manipulation approaches.; The abstract directly contrasts chemogenetics with thermogenetics and optogenetics as related manipulation approaches.; The abstract contrasts it with optogenetics, genome-editing tools, and expression-modulation strategies.; Optogenetics is explicitly named as a parallel tool for revealing stress-related neurocircuits.; The review contrasts this with traditional exogenous sensory-motor stimulation protocols and also mentions optogenetics and automated real-time sleep-scoring algorithms.; The review mentions optogenetics and genetic or virus-based connectomics as nearby complementary approaches.; The abstract places chemogenetics alongside optogenetics and imaging as related approaches for circuit-level investigation.; Optogenetics is the main contrasted alternative named in the abstract, serving a similar circuit-interrogation role.; The abstract explicitly contrasts chemogenetics with optogenetics and optical imaging as related approaches.; The paper explicitly contrasts chemogenetics with optogenetics.; Optogenetics is explicitly named as a parallel advanced tool for illuminating astrocyte roles in memory.; The supplied summary places chemogenetics alongside optogenetics and RNA-sequencing as related approaches.

Shared frame: source-stated alternative in extracted literature

Strengths here: described as a transformative tool for manipulating circuits; precise control of specific neuronal types and neural circuits; has significantly contributed to understanding neural circuits involved in depression.

Relative tradeoffs: the abstract does not specify construct types, delivery methods, or temporal precision; the review discusses potential and challenges of chemogenetics in future research, but the abstract does not specify them; the review discusses potential and challenges of chemogenetics in future research.

Source:

The review names optogenetics as another manipulation approach and spatial transcriptomics or snRNA-seq as non-perturbative mapping approaches.

Source:

The review discusses chemogenetics alongside optogenetics and mentions sonogenetics and odourgenetics as related approaches developed from these tool classes.

Source:

The abstract discusses optogenetics alongside chemogenetics and mentions sonogenetics and odourgenetics as related approaches developed from them.

Source:

The review contrasts chemogenetics with optogenetics, magnetogenetics, biophysical methods, and toxin-based neuromodulation.

Source:

Other integrated approaches named are electrophysiology, optogenetics, and behavioral paradigms.

Source:

The review discusses optogenetics, CRISPR, ASOs, RNAi, siRNAs, and virus-based delivery systems as related approaches.

Source:

Optogenetics is the explicitly named alternative in the abstract.

Source:

The abstract contrasts chemogenetics with optogenetics as a perturbation approach and with calcium imaging or electrophysiology as readout approaches.

Source:

The abstract lists optogenetics, genetically targeted cellular ablation, and over-expression of ion channels as alternative manipulation approaches.

Source:

The abstract directly contrasts chemogenetics with thermogenetics and optogenetics as related manipulation approaches.

Source:

The abstract contrasts it with optogenetics, genome-editing tools, and expression-modulation strategies.

Source:

Optogenetics is explicitly named as a parallel tool for revealing stress-related neurocircuits.

Source:

The review contrasts this with traditional exogenous sensory-motor stimulation protocols and also mentions optogenetics and automated real-time sleep-scoring algorithms.

Source:

The review mentions optogenetics and genetic or virus-based connectomics as nearby complementary approaches.

Source:

The abstract places chemogenetics alongside optogenetics and imaging as related approaches for circuit-level investigation.

Source:

Optogenetics is the main contrasted alternative named in the abstract, serving a similar circuit-interrogation role.

Source:

The abstract explicitly contrasts chemogenetics with optogenetics and optical imaging as related approaches.

Source:

The paper explicitly contrasts chemogenetics with optogenetics.

Source:

Optogenetics is explicitly named as a parallel advanced tool for illuminating astrocyte roles in memory.

Source:

The supplied summary places chemogenetics alongside optogenetics and RNA-sequencing as related approaches.

The abstract directly names optogenetic manipulations as a nearby alternative approach.

Shared frame: source-stated alternative in extracted literature

Strengths here: described as a transformative tool for manipulating circuits; precise control of specific neuronal types and neural circuits; has significantly contributed to understanding neural circuits involved in depression.

Relative tradeoffs: the abstract does not specify construct types, delivery methods, or temporal precision; the review discusses potential and challenges of chemogenetics in future research, but the abstract does not specify them; the review discusses potential and challenges of chemogenetics in future research.

Source:

The abstract directly names optogenetic manipulations as a nearby alternative approach.

The review names optogenetics as another manipulation approach and spatial transcriptomics or snRNA-seq as non-perturbative mapping approaches.; The review discusses chemogenetics alongside optogenetics and mentions sonogenetics and odourgenetics as related approaches developed from these tool classes.; The abstract discusses optogenetics alongside chemogenetics and mentions sonogenetics and odourgenetics as related approaches developed from them.; The review contrasts chemogenetics with optogenetics, magnetogenetics, biophysical methods, and toxin-based neuromodulation.; Other integrated approaches named are electrophysiology, optogenetics, and behavioral paradigms.; The review discusses optogenetics, CRISPR, ASOs, RNAi, siRNAs, and virus-based delivery systems as related approaches.; Optogenetics is the explicitly named alternative in the abstract.; The abstract contrasts chemogenetics with optogenetics as a perturbation approach and with calcium imaging or electrophysiology as readout approaches.; The abstract lists optogenetics, genetically targeted cellular ablation, and over-expression of ion channels as alternative manipulation approaches.; The abstract directly contrasts chemogenetics with thermogenetics and optogenetics as related manipulation approaches.; The abstract contrasts it with optogenetics, genome-editing tools, and expression-modulation strategies.; Optogenetics is explicitly named as a parallel tool for revealing stress-related neurocircuits.; The review contrasts this with traditional exogenous sensory-motor stimulation protocols and also mentions optogenetics and automated real-time sleep-scoring algorithms.; The review mentions optogenetics and genetic or virus-based connectomics as nearby complementary approaches.; The abstract places chemogenetics alongside optogenetics and imaging as related approaches for circuit-level investigation.; Optogenetics is the main contrasted alternative named in the abstract, serving a similar circuit-interrogation role.; The abstract explicitly contrasts chemogenetics with optogenetics and optical imaging as related approaches.; The paper explicitly contrasts chemogenetics with optogenetics.; Optogenetics is explicitly named as a parallel advanced tool for illuminating astrocyte roles in memory.; The supplied summary places chemogenetics alongside optogenetics and RNA-sequencing as related approaches.

Shared frame: source-stated alternative in extracted literature

Strengths here: described as a transformative tool for manipulating circuits; precise control of specific neuronal types and neural circuits; has significantly contributed to understanding neural circuits involved in depression.

Relative tradeoffs: the abstract does not specify construct types, delivery methods, or temporal precision; the review discusses potential and challenges of chemogenetics in future research, but the abstract does not specify them; the review discusses potential and challenges of chemogenetics in future research.

Source:

The review names optogenetics as another manipulation approach and spatial transcriptomics or snRNA-seq as non-perturbative mapping approaches.

Source:

The review discusses chemogenetics alongside optogenetics and mentions sonogenetics and odourgenetics as related approaches developed from these tool classes.

Source:

The abstract discusses optogenetics alongside chemogenetics and mentions sonogenetics and odourgenetics as related approaches developed from them.

Source:

The review contrasts chemogenetics with optogenetics, magnetogenetics, biophysical methods, and toxin-based neuromodulation.

Source:

Other integrated approaches named are electrophysiology, optogenetics, and behavioral paradigms.

Source:

The review discusses optogenetics, CRISPR, ASOs, RNAi, siRNAs, and virus-based delivery systems as related approaches.

Source:

Optogenetics is the explicitly named alternative in the abstract.

Source:

The abstract contrasts chemogenetics with optogenetics as a perturbation approach and with calcium imaging or electrophysiology as readout approaches.

Source:

The abstract lists optogenetics, genetically targeted cellular ablation, and over-expression of ion channels as alternative manipulation approaches.

Source:

The abstract directly contrasts chemogenetics with thermogenetics and optogenetics as related manipulation approaches.

Source:

The abstract contrasts it with optogenetics, genome-editing tools, and expression-modulation strategies.

Source:

Optogenetics is explicitly named as a parallel tool for revealing stress-related neurocircuits.

Source:

The review contrasts this with traditional exogenous sensory-motor stimulation protocols and also mentions optogenetics and automated real-time sleep-scoring algorithms.

Source:

The review mentions optogenetics and genetic or virus-based connectomics as nearby complementary approaches.

Source:

The abstract places chemogenetics alongside optogenetics and imaging as related approaches for circuit-level investigation.

Source:

Optogenetics is the main contrasted alternative named in the abstract, serving a similar circuit-interrogation role.

Source:

The abstract explicitly contrasts chemogenetics with optogenetics and optical imaging as related approaches.

Source:

The paper explicitly contrasts chemogenetics with optogenetics.

Source:

Optogenetics is explicitly named as a parallel advanced tool for illuminating astrocyte roles in memory.

Source:

The supplied summary places chemogenetics alongside optogenetics and RNA-sequencing as related approaches.

The abstract lists optogenetics, genetically targeted cellular ablation, and over-expression of ion channels as alternative manipulation approaches.

Shared frame: source-stated alternative in extracted literature

Strengths here: described as a transformative tool for manipulating circuits; precise control of specific neuronal types and neural circuits; has significantly contributed to understanding neural circuits involved in depression.

Relative tradeoffs: the abstract does not specify construct types, delivery methods, or temporal precision; the review discusses potential and challenges of chemogenetics in future research, but the abstract does not specify them; the review discusses potential and challenges of chemogenetics in future research.

Source:

The abstract lists optogenetics, genetically targeted cellular ablation, and over-expression of ion channels as alternative manipulation approaches.

Compared with RNA sequencing

The supplied summary places chemogenetics alongside optogenetics and RNA-sequencing as related approaches.

Shared frame: source-stated alternative in extracted literature

Strengths here: described as a transformative tool for manipulating circuits; precise control of specific neuronal types and neural circuits; has significantly contributed to understanding neural circuits involved in depression.

Relative tradeoffs: the abstract does not specify construct types, delivery methods, or temporal precision; the review discusses potential and challenges of chemogenetics in future research, but the abstract does not specify them; the review discusses potential and challenges of chemogenetics in future research.

Source:

The supplied summary places chemogenetics alongside optogenetics and RNA-sequencing as related approaches.

Compared with small interfering RNA

The review discusses optogenetics, CRISPR, ASOs, RNAi, siRNAs, and virus-based delivery systems as related approaches.

Shared frame: source-stated alternative in extracted literature

Strengths here: described as a transformative tool for manipulating circuits; precise control of specific neuronal types and neural circuits; has significantly contributed to understanding neural circuits involved in depression.

Relative tradeoffs: the abstract does not specify construct types, delivery methods, or temporal precision; the review discusses potential and challenges of chemogenetics in future research, but the abstract does not specify them; the review discusses potential and challenges of chemogenetics in future research.

Source:

The review discusses optogenetics, CRISPR, ASOs, RNAi, siRNAs, and virus-based delivery systems as related approaches.

Compared with spatial atlases

The review names optogenetics as another manipulation approach and spatial transcriptomics or snRNA-seq as non-perturbative mapping approaches.

Shared frame: source-stated alternative in extracted literature

Strengths here: described as a transformative tool for manipulating circuits; precise control of specific neuronal types and neural circuits; has significantly contributed to understanding neural circuits involved in depression.

Relative tradeoffs: the abstract does not specify construct types, delivery methods, or temporal precision; the review discusses potential and challenges of chemogenetics in future research, but the abstract does not specify them; the review discusses potential and challenges of chemogenetics in future research.

Source:

The review names optogenetics as another manipulation approach and spatial transcriptomics or snRNA-seq as non-perturbative mapping approaches.

The review names optogenetics as another manipulation approach and spatial transcriptomics or snRNA-seq as non-perturbative mapping approaches.

Shared frame: source-stated alternative in extracted literature

Strengths here: described as a transformative tool for manipulating circuits; precise control of specific neuronal types and neural circuits; has significantly contributed to understanding neural circuits involved in depression.

Relative tradeoffs: the abstract does not specify construct types, delivery methods, or temporal precision; the review discusses potential and challenges of chemogenetics in future research, but the abstract does not specify them; the review discusses potential and challenges of chemogenetics in future research.

Source:

The review names optogenetics as another manipulation approach and spatial transcriptomics or snRNA-seq as non-perturbative mapping approaches.

The review contrasts chemogenetics with optogenetics, magnetogenetics, biophysical methods, and toxin-based neuromodulation.

Shared frame: source-stated alternative in extracted literature

Strengths here: described as a transformative tool for manipulating circuits; precise control of specific neuronal types and neural circuits; has significantly contributed to understanding neural circuits involved in depression.

Relative tradeoffs: the abstract does not specify construct types, delivery methods, or temporal precision; the review discusses potential and challenges of chemogenetics in future research, but the abstract does not specify them; the review discusses potential and challenges of chemogenetics in future research.

Source:

The review contrasts chemogenetics with optogenetics, magnetogenetics, biophysical methods, and toxin-based neuromodulation.

Ranked Citations

  1. 1.
    StructuralSource 1Frontiers in Neural Circuits2022Claim 78Claim 81Claim 89

    Extracted from this source document. Seeded from load plan for claim cl1.

  2. 2.
    StructuralSource 2Journal of Neurology2017Claim 160Claim 161Claim 162

    Seeded from load plan for claim clm_1. Extracted from this source document.

  3. 3.
    StructuralSource 3Stress and Brain2021Claim 130Claim 131

    Seeded from load plan for claim cl_2. Extracted from this source document.

  4. 4.
    StructuralSource 4Journal of Neuroscience Research2017Claim 154Claim 156Claim 158

    Extracted from this source document. Seeded from load plan for claim cl1.

  5. 5.
    StructuralSource 5Neuroscience2017Claim 163Claim 165

    Extracted from this source document. Seeded from load plan for claim cl2.

  6. 6.
    StructuralSource 6Cell Calcium2025Claim 1Claim 10Claim 11

    Extracted from this source document. Seeded from load plan for claim cl4.

  7. 7.
    StructuralSource 7Physiological Reviews2020Claim 132

    Seeded from load plan for claim cl2. Extracted from this source document.

  8. 8.
    StructuralSource 8RSC Chemical Biology2022Claim 34Claim 35Claim 36

    Extracted from this source document. Seeded from load plan for claim cl1.

  9. 9.
    StructuralSource 9Frontiers in Neuroscience2022Claim 48Claim 79

    Extracted from this source document. Seeded from load plan for claim cl1.

  10. 10.

    Extracted from this source document.

  11. 11.

    Seeded from load plan for claim cl1. Extracted from this source document.

  12. 12.
    StructuralSource 12Journal of Parkinson s Disease2018Claim 144

    Extracted from this source document. Seeded from load plan for claim cl5.

  13. 13.
    StructuralSource 13Cell Reports Medicine2024Claim 23Claim 24Claim 25

    Seeded from load plan for claim cl2. Extracted from this source document.

  14. 14.
    StructuralSource 14Biomedicine & Pharmacotherapy2021Claim 104Claim 105Claim 115

    Seeded from load plan for claim cl6. Extracted from this source document.

  15. 15.
    StructuralSource 15Journal of Clinical Medicine2023Claim 26Claim 27Claim 28

    Seeded from load plan for claim clm_1. Extracted from this source document.

  16. 16.
    StructuralSource 16Frontiers in Neuroscience2023Claim 31

    Extracted from this source document. Seeded from load plan for claim cl2.

  17. 17.
    StructuralSource 17Harvard Review of Psychiatry2017Claim 155Claim 157Claim 159

    Extracted from this source document.

  18. 18.
    StructuralSource 18Frontiers in Cellular Neuroscience2020Claim 133Claim 134Claim 135

    Extracted from this source document. Seeded from load plan for claim cl5.

  19. 19.

    Seeded from load plan for claim cl1. Extracted from this source document.

  20. 20.
    StructuralSource 20Journal of Neural Engineering2018Claim 152Claim 153

    Seeded from load plan for claim cl2. Extracted from this source document.

  21. 21.
    StructuralSource 21Frontiers in Neural Circuits2025Claim 2Claim 3Claim 7

    Extracted from this source document. Seeded from load plan for claim c2.

  22. 22.

    Extracted from this source document.

  23. 23.
    StructuralSource 23Frontiers of Medicine2022Claim 70Claim 80

    Seeded from load plan for claim cl1. Extracted from this source document.

  24. 24.
    StructuralSource 24ACS Chemical Neuroscience2019Claim 137Claim 139

    Seeded from load plan for claim clm_1. Extracted from this source document.

  25. 25.
    StructuralSource 25MED2022Claim 33

    Seeded from load plan for claim c2. Extracted from this source document.

  26. 26.
    StructuralSource 26Frontiers in Behavioral Neuroscience2021Claim 113Claim 114

    Extracted from this source document. Seeded from load plan for claim cl4.

  27. 27.
    StructuralSource 27Molecular Brain2022Claim 41Claim 42Claim 43

    Extracted from this source document. Seeded from load plan for claim cl1.

  28. 28.
    StructuralSource 28International Journal of Molecular Sciences2025Claim 18

    Seeded from load plan for claim cl3. Extracted from this source document.

  29. 29.
    StructuralSource 29Neuropsychopharmacology2018Claim 146Claim 147Claim 148

    Seeded from load plan for claim cl1. Extracted from this source document.